Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 SNORA63.6-201ENST00000364921 119 ntBASIC-1.38□□□□□ -2.63
TRBV9A0A0B4J1U6 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.38□□□□□ -2.63
TRBV9A0A0B4J1U6 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.38□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.38□□□□□ -2.63
TRBV9A0A0B4J1U6 MTCYBP9-201ENST00000431021 303 ntBASIC-1.38□□□□□ -2.63
TRBV9A0A0B4J1U6 SNORD42B-201ENST00000458893 67 ntBASIC-1.38□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.38□□□□□ -2.63
TRBV9A0A0B4J1U6 MIR4536-1-201ENST00000583537 88 ntBASIC-1.38□□□□□ -2.63
TRBV9A0A0B4J1U6 MIR6773-201ENST00000612812 74 ntBASIC-1.38□□□□□ -2.63
TRBV9A0A0B4J1U6 RNY4P6-201ENST00000363667 96 ntBASIC-1.39□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.39□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU6-816P-201ENST00000390914 107 ntBASIC-1.39□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.39□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.39□□□□□ -2.63
TRBV9A0A0B4J1U6 MIR513C-201ENST00000401352 84 ntBASIC-1.39□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU7-197P-201ENST00000458836 62 ntBASIC-1.39□□□□□ -2.63
TRBV9A0A0B4J1U6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.39□□□□□ -2.63
TRBV9A0A0B4J1U6 MIR3115-201ENST00000577915 68 ntBASIC-1.39□□□□□ -2.63
TRBV9A0A0B4J1U6 MIR8068-201ENST00000618032 68 ntBASIC-1.39□□□□□ -2.63
TRBV9A0A0B4J1U6 SNORA63-201ENST00000363450 132 ntBASIC-1.4□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.4□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU6-75P-201ENST00000515944 104 ntBASIC-1.4□□□□□ -2.63
TRBV9A0A0B4J1U6 RNA5SP67-201ENST00000516422 131 ntBASIC-1.4□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU6-719P-201ENST00000516671 104 ntBASIC-1.4□□□□□ -2.63
TRBV9A0A0B4J1U6 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.4□□□□□ -2.63
TRBV9A0A0B4J1U6 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.41□□□□□ -2.64
TRBV9A0A0B4J1U6 RNU6-151P-201ENST00000364158 107 ntBASIC-1.41□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.41□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.41□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.41□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.41□□□□□ -2.64
TRBV9A0A0B4J1U6 snoU83B.1-201ENST00000517136 88 ntBASIC-1.41□□□□□ -2.64
TRBV9A0A0B4J1U6 RNU6-706P-201ENST00000517229 104 ntBASIC-1.41□□□□□ -2.64
TRBV9A0A0B4J1U6 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.42□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.42□□□□□ -2.64
TRBV9A0A0B4J1U6 RNU6-592P-201ENST00000411333 103 ntBASIC-1.42□□□□□ -2.64
TRBV9A0A0B4J1U6 SNORD18.2-201ENST00000459604 70 ntBASIC-1.42□□□□□ -2.64
TRBV9A0A0B4J1U6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.42□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.43□□□□□ -2.64
TRBV9A0A0B4J1U6 AC025521.1-201ENST00000621624 286 ntBASIC-1.43□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.44□□□□□ -2.64
TRBV9A0A0B4J1U6 RNU6-905P-201ENST00000384434 107 ntBASIC-1.44□□□□□ -2.64
TRBV9A0A0B4J1U6 MIRLET7B-201ENST00000385140 83 ntBASIC-1.44□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.44□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.44□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.44□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.44□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.44□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.44□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.44□□□□□ -2.64
TRBV9A0A0B4J1U6 MIR409-201ENST00000362237 79 ntBASIC-1.45□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.45□□□□□ -2.64
TRBV9A0A0B4J1U6 RNU6-738P-201ENST00000384531 106 ntBASIC-1.45□□□□□ -2.64
TRBV9A0A0B4J1U6 AC141273.2-201ENST00000618989 130 ntBASIC-1.45□□□□□ -2.64
TRBV9A0A0B4J1U6 MIR548U-201ENST00000390728 81 ntBASIC-1.46□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.46□□□□□ -2.64
TRBV9A0A0B4J1U6 AC138207.3-201ENST00000585289 166 ntBASIC-1.46□□□□□ -2.64
TRBV9A0A0B4J1U6 SNORD115-23-201ENST00000364461 82 ntBASIC-1.47□□□□□ -2.64
TRBV9A0A0B4J1U6 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.47□□□□□ -2.64
TRBV9A0A0B4J1U6 SNORD50.2-201ENST00000365465 70 ntBASIC-1.47□□□□□ -2.64
TRBV9A0A0B4J1U6 SNORA62.4-201ENST00000365504 151 ntBASIC-1.47□□□□□ -2.64
TRBV9A0A0B4J1U6 AL158147.1-201ENST00000443970 75 ntBASIC-1.47□□□□□ -2.64
TRBV9A0A0B4J1U6 RNU6-781P-201ENST00000516377 101 ntBASIC-1.47□□□□□ -2.64
TRBV9A0A0B4J1U6 AP001340.1-201ENST00000624405 217 ntBASIC-1.47□□□□□ -2.64
TRBV9A0A0B4J1U6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.48□□□□□ -2.65
TRBV9A0A0B4J1U6 SNORD57-201ENST00000448188 72 ntBASIC-1.48□□□□□ -2.65
TRBV9A0A0B4J1U6 AL118496.2-201ENST00000448300 230 ntBASIC-1.48□□□□□ -2.65
TRBV9A0A0B4J1U6 AC021146.9-201ENST00000512503 156 ntBASIC-1.48□□□□□ -2.65
TRBV9A0A0B4J1U6 RNU6-861P-201ENST00000516745 106 ntBASIC-1.48□□□□□ -2.65
TRBV9A0A0B4J1U6 AC132825.6-201ENST00000638861 357 ntBASIC-1.48□□□□□ -2.65
TRBV9A0A0B4J1U6 SNORA63.2-201ENST00000362603 126 ntBASIC-1.49□□□□□ -2.65
TRBV9A0A0B4J1U6 RNU4-32P-201ENST00000363404 141 ntBASIC-1.49□□□□□ -2.65
TRBV9A0A0B4J1U6 MIR568-201ENST00000385036 95 ntBASIC-1.49□□□□□ -2.65
TRBV9A0A0B4J1U6 U7.2-201ENST00000607576 63 ntBASIC-1.5□□□□□ -2.65
TRBV9A0A0B4J1U6 AC025166.1-201ENST00000612411 163 ntBASIC-1.5□□□□□ -2.65
TRBV9A0A0B4J1U6 U6.96-201ENST00000636425 70 ntBASIC-1.5□□□□□ -2.65
TRBV9A0A0B4J1U6 RNU6-495P-201ENST00000362995 107 ntBASIC-1.51□□□□□ -2.65
TRBV9A0A0B4J1U6 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.51□□□□□ -2.65
TRBV9A0A0B4J1U6 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.51□□□□□ -2.65
TRBV9A0A0B4J1U6 MIR577-201ENST00000385196 96 ntBASIC-1.51□□□□□ -2.65
TRBV9A0A0B4J1U6 RNU6-337P-201ENST00000391243 106 ntBASIC-1.51□□□□□ -2.65
TRBV9A0A0B4J1U6 MIR4694-201ENST00000578534 80 ntBASIC-1.51□□□□□ -2.65
TRBV9A0A0B4J1U6 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.52□□□□□ -2.65
TRBV9A0A0B4J1U6 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.52□□□□□ -2.65
TRBV9A0A0B4J1U6 MIR124-2-201ENST00000385081 109 ntBASIC-1.52□□□□□ -2.65
TRBV9A0A0B4J1U6 RNU7-85P-201ENST00000458851 63 ntBASIC-1.52□□□□□ -2.65
TRBV9A0A0B4J1U6 AL513043.2-201ENST00000573941 143 ntBASIC-1.52□□□□□ -2.65
TRBV9A0A0B4J1U6 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.53□□□□□ -2.65
TRBV9A0A0B4J1U6 SNORD116-18-201ENST00000383961 92 ntBASIC-1.53□□□□□ -2.65
TRBV9A0A0B4J1U6 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.53□□□□□ -2.65
TRBV9A0A0B4J1U6 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.53□□□□□ -2.65
TRBV9A0A0B4J1U6 SNORA81.3-201ENST00000517283 198 ntBASIC-1.53□□□□□ -2.65
TRBV9A0A0B4J1U6 RNU6-132P-201ENST00000383863 107 ntBASIC-1.54□□□□□ -2.66
TRBV9A0A0B4J1U6 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.54□□□□□ -2.66
TRBV9A0A0B4J1U6 RNU7-120P-201ENST00000459334 63 ntBASIC-1.54□□□□□ -2.66
TRBV9A0A0B4J1U6 RNU6-479P-201ENST00000516348 105 ntBASIC-1.54□□□□□ -2.66
TRBV9A0A0B4J1U6 AC068339.1-201ENST00000526965 141 ntBASIC-1.54□□□□□ -2.66
TRBV9A0A0B4J1U6 MIR548X2-201ENST00000579776 100 ntBASIC-1.54□□□□□ -2.66
TRBV9A0A0B4J1U6 MIR3140-201ENST00000583685 90 ntBASIC-1.54□□□□□ -2.66
TRBV9A0A0B4J1U6 RNU6-208P-201ENST00000362431 107 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms