Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 SNORD113.1-201ENST00000363280 73 ntBASIC1.36□□□□□ -2.19
U3KQE9 MIR519E-201ENST00000385075 84 ntBASIC1.36□□□□□ -2.19
U3KQE9 MIR9-3-201ENST00000385084 90 ntBASIC1.36□□□□□ -2.19
U3KQE9 MIR23A-201ENST00000385245 73 ntBASIC1.36□□□□□ -2.19
U3KQE9 SNORD41.1-201ENST00000391000 69 ntBASIC1.36□□□□□ -2.19
U3KQE9 MIR4285-201ENST00000581001 85 ntBASIC1.36□□□□□ -2.19
U3KQE9 SNORD114-1-201ENST00000362705 72 ntBASIC1.35□□□□□ -2.19
U3KQE9 MIR19B1-201ENST00000384829 87 ntBASIC1.35□□□□□ -2.19
U3KQE9 MIR200A-201ENST00000384875 90 ntBASIC1.35□□□□□ -2.19
U3KQE9 RNU1-123P-201ENST00000458950 160 ntBASIC1.35□□□□□ -2.19
U3KQE9 MIR4513-201ENST00000581077 86 ntBASIC1.35□□□□□ -2.19
U3KQE9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
U3KQE9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
U3KQE9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
U3KQE9 RNU6-1039P-201ENST00000383931 107 ntBASIC1.34□□□□□ -2.19
U3KQE9 SNORD105-201ENST00000386910 85 ntBASIC1.34□□□□□ -2.19
U3KQE9 AC003989.2-201ENST00000440224 169 ntBASIC1.34□□□□□ -2.19
U3KQE9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.34□□□□□ -2.19
U3KQE9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
U3KQE9 SNORA7.1-201ENST00000363750 139 ntBASIC1.33□□□□□ -2.2
U3KQE9 SNORD28-201ENST00000384706 75 ntBASIC1.33□□□□□ -2.2
U3KQE9 MIR7-2-201ENST00000384970 110 ntBASIC1.33□□□□□ -2.2
U3KQE9 MTND4LP1-201ENST00000446263 157 ntBASIC1.33□□□□□ -2.2
U3KQE9 MIR4255-201ENST00000579351 72 ntBASIC1.33□□□□□ -2.2
U3KQE9 MIR4511-201ENST00000582784 87 ntBASIC1.33□□□□□ -2.2
U3KQE9 AC073869.9-201ENST00000641610 120 ntBASIC1.33□□□□□ -2.2
U3KQE9 SNORD116-24-201ENST00000384549 92 ntBASIC1.32□□□□□ -2.2
U3KQE9 RNU6-669P-201ENST00000365575 107 ntBASIC1.31□□□□□ -2.2
U3KQE9 RPL23AP94-201ENST00000512518 302 ntBASIC1.31□□□□□ -2.2
U3KQE9 MIR6509-201ENST00000614603 85 ntBASIC1.31□□□□□ -2.2
U3KQE9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.31□□□□□ -2.2
U3KQE9 AC244669.1-204ENST00000621564 178 ntBASIC1.31□□□□□ -2.2
U3KQE9 MIR583-201ENST00000384846 75 ntBASIC1.3□□□□□ -2.2
U3KQE9 AC025627.3-201ENST00000582078 182 ntBASIC1.3□□□□□ -2.2
U3KQE9 AC069503.3-201ENST00000618674 145 ntBASIC1.3□□□□□ -2.2
U3KQE9 MIR337-201ENST00000362281 93 ntBASIC1.29□□□□□ -2.2
U3KQE9 RNU6-997P-201ENST00000384725 107 ntBASIC1.29□□□□□ -2.2
U3KQE9 AC084768.2-201ENST00000622736 221 ntBASIC1.29□□□□□ -2.2
U3KQE9 SNORD114-4-201ENST00000363962 75 ntBASIC1.28□□□□□ -2.2
U3KQE9 MIR573-201ENST00000384964 99 ntBASIC1.28□□□□□ -2.2
U3KQE9 MIR644A-201ENST00000385262 94 ntBASIC1.28□□□□□ -2.2
U3KQE9 MT-TY-201ENST00000387409 66 ntBASIC1.28□□□□□ -2.2
U3KQE9 SNORD89-201ENST00000390981 114 ntBASIC1.28□□□□□ -2.2
U3KQE9 MIR548L-201ENST00000408303 86 ntBASIC1.28□□□□□ -2.2
U3KQE9 RNA5SP47-201ENST00000517230 109 ntBASIC1.28□□□□□ -2.2
U3KQE9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
U3KQE9 SNORA2.1-201ENST00000363089 137 ntBASIC1.27□□□□□ -2.21
U3KQE9 SNORD18A-201ENST00000363753 72 ntBASIC1.27□□□□□ -2.21
U3KQE9 RNU6-726P-201ENST00000364680 107 ntBASIC1.27□□□□□ -2.21
U3KQE9 RNU4-45P-201ENST00000365469 141 ntBASIC1.27□□□□□ -2.21
U3KQE9 SCARNA16.5-201ENST00000517114 183 ntBASIC1.27□□□□□ -2.21
U3KQE9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
U3KQE9 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
U3KQE9 Y_RNA.250-201ENST00000364542 110 ntBASIC1.26□□□□□ -2.21
U3KQE9 RNU6-54P-201ENST00000365563 107 ntBASIC1.26□□□□□ -2.21
U3KQE9 NAMPTP3-201ENST00000569273 224 ntBASIC1.26□□□□□ -2.21
U3KQE9 MIR3945-201ENST00000581853 98 ntBASIC1.26□□□□□ -2.21
U3KQE9 MIR6845-201ENST00000613182 61 ntBASIC1.26□□□□□ -2.21
U3KQE9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
U3KQE9 RNU6-668P-201ENST00000364180 107 ntBASIC1.25□□□□□ -2.21
U3KQE9 RNU6V-201ENST00000384105 107 ntBASIC1.25□□□□□ -2.21
U3KQE9 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
U3KQE9 SNORA8.2-201ENST00000384372 139 ntBASIC1.25□□□□□ -2.21
U3KQE9 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
U3KQE9 MIR4460-201ENST00000577862 86 ntBASIC1.25□□□□□ -2.21
U3KQE9 MIR3657-201ENST00000584818 117 ntBASIC1.25□□□□□ -2.21
U3KQE9 RNA5SP432-201ENST00000362480 116 ntBASIC1.24□□□□□ -2.21
U3KQE9 RNU6-260P-201ENST00000384092 107 ntBASIC1.24□□□□□ -2.21
U3KQE9 SNORA26.9-201ENST00000391322 122 ntBASIC1.24□□□□□ -2.21
U3KQE9 RNU6-955P-201ENST00000410497 104 ntBASIC1.24□□□□□ -2.21
U3KQE9 snoU13.15-201ENST00000459407 104 ntBASIC1.24□□□□□ -2.21
U3KQE9 RNU6-295P-201ENST00000516901 104 ntBASIC1.24□□□□□ -2.21
U3KQE9 MIR502-201ENST00000606349 86 ntBASIC1.24□□□□□ -2.21
U3KQE9 RNU1-141P-201ENST00000364623 158 ntBASIC1.23□□□□□ -2.21
U3KQE9 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
U3KQE9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.23□□□□□ -2.21
U3KQE9 RNU6-542P-201ENST00000516405 103 ntBASIC1.23□□□□□ -2.21
U3KQE9 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
U3KQE9 SNORD114-24-201ENST00000365029 72 ntBASIC1.22□□□□□ -2.21
U3KQE9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
U3KQE9 AC110620.1-201ENST00000416042 228 ntBASIC1.22□□□□□ -2.21
U3KQE9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.22□□□□□ -2.21
U3KQE9 MIR3678-201ENST00000578455 94 ntBASIC1.22□□□□□ -2.21
U3KQE9 MIR3612-201ENST00000579753 87 ntBASIC1.22□□□□□ -2.21
U3KQE9 MIR8081-201ENST00000611533 95 ntBASIC1.22□□□□□ -2.21
U3KQE9 MIR6828-201ENST00000636181 60 ntBASIC1.22□□□□□ -2.21
U3KQE9 Y_RNA.375-201ENST00000365625 101 ntBASIC1.21□□□□□ -2.22
U3KQE9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.2□□□□□ -2.22
U3KQE9 SNORD42B-201ENST00000458893 67 ntBASIC1.2□□□□□ -2.22
U3KQE9 RNU6-982P-201ENST00000516216 102 ntBASIC1.2□□□□□ -2.22
U3KQE9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.2□□□□□ -2.22
U3KQE9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.2□□□□□ -2.22
U3KQE9 AL162376.1-201ENST00000624117 175 ntBASIC1.2□□□□□ -2.22
U3KQE9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
U3KQE9 RNU6-645P-201ENST00000364649 106 ntBASIC1.19□□□□□ -2.22
U3KQE9 RNA5SP363-201ENST00000365072 115 ntBASIC1.19□□□□□ -2.22
U3KQE9 RNU6-499P-201ENST00000365615 107 ntBASIC1.19□□□□□ -2.22
U3KQE9 MIR504-201ENST00000385065 83 ntBASIC1.19□□□□□ -2.22
U3KQE9 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
U3KQE9 SNORA25.15-201ENST00000516487 89 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms