Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.47□□□□□ -2.64
CDC42SE1Q9NRR8 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.47□□□□□ -2.64
CDC42SE1Q9NRR8 SNORD50.2-201ENST00000365465 70 ntBASIC-1.47□□□□□ -2.64
CDC42SE1Q9NRR8 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.47□□□□□ -2.64
CDC42SE1Q9NRR8 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.47□□□□□ -2.64
CDC42SE1Q9NRR8 RBMX2P4-201ENST00000441256 376 ntBASIC-1.47□□□□□ -2.64
CDC42SE1Q9NRR8 MIR4680-201ENST00000580906 66 ntBASIC-1.47□□□□□ -2.64
CDC42SE1Q9NRR8 MIR3140-201ENST00000583685 90 ntBASIC-1.47□□□□□ -2.64
CDC42SE1Q9NRR8 AL442128.1-201ENST00000615151 90 ntBASIC-1.47□□□□□ -2.64
CDC42SE1Q9NRR8 U6atac.1-201ENST00000616025 117 ntBASIC-1.47□□□□□ -2.64
CDC42SE1Q9NRR8 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.48□□□□□ -2.65
CDC42SE1Q9NRR8 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.48□□□□□ -2.65
CDC42SE1Q9NRR8 MIR527-201ENST00000385244 85 ntBASIC-1.48□□□□□ -2.65
CDC42SE1Q9NRR8 MT-TW-201ENST00000387382 68 ntBASIC-1.48□□□□□ -2.65
CDC42SE1Q9NRR8 SNORD75.2-201ENST00000408784 58 ntBASIC-1.48□□□□□ -2.65
CDC42SE1Q9NRR8 RNU7-85P-201ENST00000458851 63 ntBASIC-1.48□□□□□ -2.65
CDC42SE1Q9NRR8 AC107027.2-201ENST00000512197 115 ntBASIC-1.48□□□□□ -2.65
CDC42SE1Q9NRR8 AC025521.1-201ENST00000621624 286 ntBASIC-1.48□□□□□ -2.65
CDC42SE1Q9NRR8 RNU6-924P-201ENST00000362926 108 ntBASIC-1.49□□□□□ -2.65
CDC42SE1Q9NRR8 RNU6-132P-201ENST00000383863 107 ntBASIC-1.49□□□□□ -2.65
CDC42SE1Q9NRR8 RNU6-10P-201ENST00000384036 107 ntBASIC-1.49□□□□□ -2.65
CDC42SE1Q9NRR8 MIR548D2-201ENST00000384955 97 ntBASIC-1.49□□□□□ -2.65
CDC42SE1Q9NRR8 RNU6-65P-201ENST00000516332 98 ntBASIC-1.49□□□□□ -2.65
CDC42SE1Q9NRR8 MIR3165-201ENST00000579874 75 ntBASIC-1.49□□□□□ -2.65
CDC42SE1Q9NRR8 MIR4536-1-201ENST00000583537 88 ntBASIC-1.49□□□□□ -2.65
CDC42SE1Q9NRR8 MIR4795-201ENST00000584182 89 ntBASIC-1.49□□□□□ -2.65
CDC42SE1Q9NRR8 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.5□□□□□ -2.65
CDC42SE1Q9NRR8 MIR548A1-201ENST00000385041 97 ntBASIC-1.5□□□□□ -2.65
CDC42SE1Q9NRR8 RNU6-576P-201ENST00000390854 102 ntBASIC-1.5□□□□□ -2.65
CDC42SE1Q9NRR8 MIR8485-201ENST00000401372 91 ntBASIC-1.5□□□□□ -2.65
CDC42SE1Q9NRR8 MIR548H3-201ENST00000408771 118 ntBASIC-1.5□□□□□ -2.65
CDC42SE1Q9NRR8 Y_RNA.676-201ENST00000516393 96 ntBASIC-1.5□□□□□ -2.65
CDC42SE1Q9NRR8 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.51□□□□□ -2.65
CDC42SE1Q9NRR8 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.51□□□□□ -2.65
CDC42SE1Q9NRR8 RNU6-409P-201ENST00000384114 104 ntBASIC-1.51□□□□□ -2.65
CDC42SE1Q9NRR8 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.51□□□□□ -2.65
CDC42SE1Q9NRR8 RNU2-51P-201ENST00000410708 197 ntBASIC-1.51□□□□□ -2.65
CDC42SE1Q9NRR8 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.51□□□□□ -2.65
CDC42SE1Q9NRR8 RNA5SP26-201ENST00000362406 119 ntBASIC-1.52□□□□□ -2.65
CDC42SE1Q9NRR8 SNORD115-22-201ENST00000364456 82 ntBASIC-1.52□□□□□ -2.65
CDC42SE1Q9NRR8 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.52□□□□□ -2.65
CDC42SE1Q9NRR8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.52□□□□□ -2.65
CDC42SE1Q9NRR8 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.52□□□□□ -2.65
CDC42SE1Q9NRR8 SNORD127-201ENST00000458892 86 ntBASIC-1.52□□□□□ -2.65
CDC42SE1Q9NRR8 MIR3121-201ENST00000579680 77 ntBASIC-1.52□□□□□ -2.65
CDC42SE1Q9NRR8 SNORA33.1-201ENST00000364957 130 ntBASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 RNU6-918P-201ENST00000391219 106 ntBASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 MIR548P-201ENST00000408336 84 ntBASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 RNU4-61P-201ENST00000411243 107 ntBASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 snoU13.17-201ENST00000458802 104 ntBASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 MIR3064-201ENST00000581130 66 ntBASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 MIR3658-201ENST00000636291 56 ntBASIC-1.53□□□□□ -2.65
CDC42SE1Q9NRR8 MTND4P29-201ENST00000503122 1372 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 RNU6-312P-201ENST00000364629 107 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.355-201ENST00000365462 98 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 MIR889-201ENST00000401280 79 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 MIR1255B2-201ENST00000408618 67 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 RNA5SP25-201ENST00000410815 110 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 RNU7-121P-201ENST00000516604 62 ntBASIC-1.54□□□□□ -2.66
CDC42SE1Q9NRR8 MIR1302-6-201ENST00000408466 90 ntBASIC-1.55□□□□□ -2.66
CDC42SE1Q9NRR8 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.55□□□□□ -2.66
CDC42SE1Q9NRR8 MIR8062-201ENST00000621515 85 ntBASIC-1.55□□□□□ -2.66
CDC42SE1Q9NRR8 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 RNU6-260P-201ENST00000384092 107 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 RNU6-713P-201ENST00000384761 107 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 MIR587-201ENST00000384845 96 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 SNORD58.1-201ENST00000391313 66 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 RNU6-985P-201ENST00000410182 104 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 AL513043.2-201ENST00000573941 143 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 MIR6502-201ENST00000617296 76 ntBASIC-1.56□□□□□ -2.66
CDC42SE1Q9NRR8 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.57□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.57□□□□□ -2.66
CDC42SE1Q9NRR8 RNA5SP136-201ENST00000410906 107 ntBASIC-1.57□□□□□ -2.66
CDC42SE1Q9NRR8 HLA-S-202ENST00000425174 53 ntBASIC-1.57□□□□□ -2.66
CDC42SE1Q9NRR8 CYP3A54P-201ENST00000566950 75 ntBASIC-1.57□□□□□ -2.66
CDC42SE1Q9NRR8 AC104996.3-201ENST00000590718 94 ntBASIC-1.57□□□□□ -2.66
CDC42SE1Q9NRR8 AC091912.2-201ENST00000624798 167 ntBASIC-1.57□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.58□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.58□□□□□ -2.66
CDC42SE1Q9NRR8 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.58□□□□□ -2.66
CDC42SE1Q9NRR8 MIR548U-201ENST00000390728 81 ntBASIC-1.58□□□□□ -2.66
CDC42SE1Q9NRR8 AC130289.1-201ENST00000577321 73 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms