Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC108081.1-201ENST00000604358 221 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 MIR1285-2-201ENST00000408311 88 ntBASIC-0.79□□□□□ -2.54
SHANK3Q9BYB0 AL117187.1-201ENST00000555482 181 ntBASIC-0.79□□□□□ -2.54
SHANK3Q9BYB0 MIR6854-201ENST00000614935 69 ntBASIC-0.79□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.8□□□□□ -2.54
SHANK3Q9BYB0 MIR548F4-201ENST00000408515 105 ntBASIC-0.8□□□□□ -2.54
SHANK3Q9BYB0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.8□□□□□ -2.54
SHANK3Q9BYB0 MIR4696-201ENST00000581431 70 ntBASIC-0.8□□□□□ -2.54
SHANK3Q9BYB0 AC008737.2-201ENST00000599446 118 ntBASIC-0.8□□□□□ -2.54
SHANK3Q9BYB0 RNU6-502P-201ENST00000362419 108 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 MIR548G-201ENST00000408442 89 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 MTND2P23-201ENST00000422990 651 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 MIR3165-201ENST00000579874 75 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 AL442128.1-201ENST00000615151 90 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU4-36P-201ENST00000364294 144 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU6-738P-201ENST00000384531 106 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 MT-TI-201ENST00000387365 69 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 SNORD37.2-201ENST00000391075 66 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 AP001094.1-201ENST00000579805 193 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU6-647P-201ENST00000364243 107 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 RNA5SP192-201ENST00000364404 120 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 RNU6-409P-201ENST00000384114 104 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 MIR606-201ENST00000384851 96 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 MIR1255B1-201ENST00000636325 63 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 MTND5P18-201ENST00000445624 1801 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 SNORD115-25-201ENST00000362619 82 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 RNY4P27-201ENST00000363341 96 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 SNORD38.3-201ENST00000516599 73 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 MIR3179-1-201ENST00000578940 84 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 MIR3179-2-201ENST00000579107 84 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 MIR3179-3-201ENST00000579566 84 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 MIR4324-201ENST00000584846 72 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 AC062037.2-201ENST00000610137 73 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 MIR3179-4-201ENST00000617599 84 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 RNU6-973P-201ENST00000364690 107 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 RNU6-466P-201ENST00000391224 103 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 MIR1302-3-201ENST00000408128 138 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 AP002392.1-201ENST00000537692 208 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 MIR4536-1-201ENST00000583537 88 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 snoR1.1-201ENST00000628177 80 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 SNORA20.1-201ENST00000364790 130 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 AL445193.1-201ENST00000441183 141 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 MIR3128-201ENST00000581957 66 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 AC072026.1-201ENST00000605023 201 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 SNORA49-201ENST00000386157 136 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 MTATP8P1-201ENST00000467115 207 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 RNA5SP169-201ENST00000517268 117 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 MIR513C-201ENST00000401352 84 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 RNU6-935P-201ENST00000410371 100 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 RNY4P7-201ENST00000364600 96 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 SNORD22.1-201ENST00000516331 125 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 AC145423.2-201ENST00000610631 239 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 RNU6-24P-201ENST00000384440 107 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 MIR548D2-201ENST00000384955 97 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 SNORA7.5-201ENST00000410672 110 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 AL161932.1-201ENST00000437408 146 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 AL117351.2-201ENST00000513571 157 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 MIR196A1-201ENST00000388006 70 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 MIR548E-201ENST00000408287 88 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 RNU6-86P-201ENST00000606534 107 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 RNU6-721P-201ENST00000410155 105 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 MTCYBP9-201ENST00000431021 303 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 RNU6-75P-201ENST00000515944 104 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 222 ms