Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RNU6-309P-201ENST00000364573 106 ntBASIC-1.64□□□□□ -2.67
LYSMD1Q96S90 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.64□□□□□ -2.67
LYSMD1Q96S90 MT-TI-201ENST00000387365 69 ntBASIC-1.64□□□□□ -2.67
LYSMD1Q96S90 SNORA26.4-201ENST00000391188 123 ntBASIC-1.64□□□□□ -2.67
LYSMD1Q96S90 RNU6-75P-201ENST00000515944 104 ntBASIC-1.64□□□□□ -2.67
LYSMD1Q96S90 RNU6-65P-201ENST00000516332 98 ntBASIC-1.64□□□□□ -2.67
LYSMD1Q96S90 AC026407.1-201ENST00000518369 204 ntBASIC-1.64□□□□□ -2.67
LYSMD1Q96S90 AC090971.5-201ENST00000621102 293 ntBASIC-1.64□□□□□ -2.67
LYSMD1Q96S90 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.64□□□□□ -2.67
LYSMD1Q96S90 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.65□□□□□ -2.67
LYSMD1Q96S90 RNU6-495P-201ENST00000362995 107 ntBASIC-1.65□□□□□ -2.67
LYSMD1Q96S90 SNORD115-33-201ENST00000363723 82 ntBASIC-1.65□□□□□ -2.67
LYSMD1Q96S90 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.65□□□□□ -2.67
LYSMD1Q96S90 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.65□□□□□ -2.67
LYSMD1Q96S90 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.65□□□□□ -2.67
LYSMD1Q96S90 AL627230.5-201ENST00000619807 58 ntBASIC-1.65□□□□□ -2.67
LYSMD1Q96S90 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.66□□□□□ -2.68
LYSMD1Q96S90 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.66□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.66□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.66□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.66□□□□□ -2.68
LYSMD1Q96S90 MIR507-201ENST00000385234 94 ntBASIC-1.66□□□□□ -2.68
LYSMD1Q96S90 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.66□□□□□ -2.68
LYSMD1Q96S90 AC026421.1-201ENST00000519101 163 ntBASIC-1.66□□□□□ -2.68
LYSMD1Q96S90 MIR4520-1-201ENST00000582609 70 ntBASIC-1.66□□□□□ -2.68
LYSMD1Q96S90 MIR3140-201ENST00000583685 90 ntBASIC-1.66□□□□□ -2.68
LYSMD1Q96S90 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.67□□□□□ -2.68
LYSMD1Q96S90 RNU6-275P-201ENST00000364910 107 ntBASIC-1.67□□□□□ -2.68
LYSMD1Q96S90 SNORA75.5-201ENST00000391291 81 ntBASIC-1.67□□□□□ -2.68
LYSMD1Q96S90 MIR1255B2-201ENST00000408618 67 ntBASIC-1.67□□□□□ -2.68
LYSMD1Q96S90 MIR1468-201ENST00000410600 86 ntBASIC-1.67□□□□□ -2.68
LYSMD1Q96S90 AC022028.1-201ENST00000412054 408 ntBASIC-1.67□□□□□ -2.68
LYSMD1Q96S90 MIR5591-201ENST00000578248 65 ntBASIC-1.67□□□□□ -2.68
LYSMD1Q96S90 MIR4536-1-201ENST00000583537 88 ntBASIC-1.67□□□□□ -2.68
LYSMD1Q96S90 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.67□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.68□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.68□□□□□ -2.68
LYSMD1Q96S90 RNY3P1-201ENST00000365085 102 ntBASIC-1.68□□□□□ -2.68
LYSMD1Q96S90 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.68□□□□□ -2.68
LYSMD1Q96S90 RNA5SP147-201ENST00000516493 109 ntBASIC-1.68□□□□□ -2.68
LYSMD1Q96S90 RNU6-623P-201ENST00000363143 105 ntBASIC-1.69□□□□□ -2.68
LYSMD1Q96S90 MIR759-201ENST00000390224 91 ntBASIC-1.69□□□□□ -2.68
LYSMD1Q96S90 Z83846.1-201ENST00000446798 265 ntBASIC-1.69□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.69□□□□□ -2.68
LYSMD1Q96S90 AC091912.2-201ENST00000624798 167 ntBASIC-1.69□□□□□ -2.68
LYSMD1Q96S90 MIR369-201ENST00000362155 70 ntBASIC-1.7□□□□□ -2.68
LYSMD1Q96S90 SNORA63.2-201ENST00000362603 126 ntBASIC-1.7□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.7□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.7□□□□□ -2.68
LYSMD1Q96S90 MIR1285-2-201ENST00000408311 88 ntBASIC-1.7□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.7□□□□□ -2.68
LYSMD1Q96S90 MIR6874-201ENST00000635894 71 ntBASIC-1.7□□□□□ -2.68
LYSMD1Q96S90 U6.106-201ENST00000636360 105 ntBASIC-1.7□□□□□ -2.68
LYSMD1Q96S90 MIR6844-201ENST00000637122 62 ntBASIC-1.7□□□□□ -2.68
LYSMD1Q96S90 SNORD115-22-201ENST00000364456 82 ntBASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 SNORA33.1-201ENST00000364957 130 ntBASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 MIR548A1-201ENST00000385041 97 ntBASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 AL353691.2-201ENST00000443795 59 ntBASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 FGF7P6-202ENST00000451282 293 ntBASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 AC025521.1-201ENST00000621624 286 ntBASIC-1.71□□□□□ -2.68
LYSMD1Q96S90 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.72□□□□□ -2.68
LYSMD1Q96S90 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.72□□□□□ -2.68
LYSMD1Q96S90 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.72□□□□□ -2.68
LYSMD1Q96S90 SNORD75.2-201ENST00000408784 58 ntBASIC-1.72□□□□□ -2.68
LYSMD1Q96S90 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.72□□□□□ -2.68
LYSMD1Q96S90 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.72□□□□□ -2.68
LYSMD1Q96S90 MIR6129-201ENST00000616087 109 ntBASIC-1.72□□□□□ -2.68
LYSMD1Q96S90 RNU6-363P-201ENST00000362895 105 ntBASIC-1.73□□□□□ -2.69
LYSMD1Q96S90 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.73□□□□□ -2.69
LYSMD1Q96S90 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.73□□□□□ -2.69
LYSMD1Q96S90 RNU6-132P-201ENST00000383863 107 ntBASIC-1.73□□□□□ -2.69
LYSMD1Q96S90 RNU6-409P-201ENST00000384114 104 ntBASIC-1.73□□□□□ -2.69
LYSMD1Q96S90 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.73□□□□□ -2.69
LYSMD1Q96S90 MIR4643-201ENST00000577473 78 ntBASIC-1.73□□□□□ -2.69
LYSMD1Q96S90 MIR3149-201ENST00000584629 83 ntBASIC-1.73□□□□□ -2.69
LYSMD1Q96S90 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.73□□□□□ -2.69
LYSMD1Q96S90 AL442128.1-201ENST00000615151 90 ntBASIC-1.73□□□□□ -2.69
LYSMD1Q96S90 RNA5SP26-201ENST00000362406 119 ntBASIC-1.74□□□□□ -2.69
LYSMD1Q96S90 RNY1P11-201ENST00000363759 113 ntBASIC-1.74□□□□□ -2.69
LYSMD1Q96S90 AL078595.1-201ENST00000404458 226 ntBASIC-1.74□□□□□ -2.69
LYSMD1Q96S90 MTND1P19-201ENST00000511780 315 ntBASIC-1.74□□□□□ -2.69
LYSMD1Q96S90 AC113195.1-201ENST00000579952 141 ntBASIC-1.74□□□□□ -2.69
LYSMD1Q96S90 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.74□□□□□ -2.69
LYSMD1Q96S90 MIR365A-201ENST00000362260 87 ntBASIC-1.75□□□□□ -2.69
LYSMD1Q96S90 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.75□□□□□ -2.69
LYSMD1Q96S90 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.75□□□□□ -2.69
LYSMD1Q96S90 MIR203A-201ENST00000384836 110 ntBASIC-1.75□□□□□ -2.69
LYSMD1Q96S90 snoU13.17-201ENST00000458802 104 ntBASIC-1.75□□□□□ -2.69
LYSMD1Q96S90 AC107027.2-201ENST00000512197 115 ntBASIC-1.75□□□□□ -2.69
LYSMD1Q96S90 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.75□□□□□ -2.69
LYSMD1Q96S90 MIR4770-201ENST00000579149 58 ntBASIC-1.75□□□□□ -2.69
LYSMD1Q96S90 MIR4441-201ENST00000582623 100 ntBASIC-1.75□□□□□ -2.69
LYSMD1Q96S90 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.76□□□□□ -2.69
LYSMD1Q96S90 RNU6-164P-201ENST00000364604 103 ntBASIC-1.76□□□□□ -2.69
LYSMD1Q96S90 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 353.9 ms