Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.53□□□□□ -2.49
VMP1Q96GC9 MIR216B-201ENST00000390186 82 ntBASIC-0.53□□□□□ -2.49
VMP1Q96GC9 RNU6-816P-201ENST00000390914 107 ntBASIC-0.53□□□□□ -2.49
VMP1Q96GC9 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.53□□□□□ -2.49
VMP1Q96GC9 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.53□□□□□ -2.49
VMP1Q96GC9 MIR1912-201ENST00000410389 80 ntBASIC-0.53□□□□□ -2.49
VMP1Q96GC9 MIR4802-201ENST00000581881 80 ntBASIC-0.53□□□□□ -2.49
VMP1Q96GC9 AL590491.3-201ENST00000610731 82 ntBASIC-0.53□□□□□ -2.49
VMP1Q96GC9 AC025166.1-201ENST00000612411 163 ntBASIC-0.53□□□□□ -2.49
VMP1Q96GC9 RNU6-235P-201ENST00000362644 107 ntBASIC-0.54□□□□□ -2.5
VMP1Q96GC9 SNORD58C-201ENST00000365223 64 ntBASIC-0.54□□□□□ -2.5
VMP1Q96GC9 SNORD126-201ENST00000459475 77 ntBASIC-0.54□□□□□ -2.5
VMP1Q96GC9 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.54□□□□□ -2.5
VMP1Q96GC9 MIR4696-201ENST00000581431 70 ntBASIC-0.54□□□□□ -2.5
VMP1Q96GC9 RNU6-664P-201ENST00000362381 107 ntBASIC-0.55□□□□□ -2.5
VMP1Q96GC9 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.55□□□□□ -2.5
VMP1Q96GC9 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.55□□□□□ -2.5
VMP1Q96GC9 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.55□□□□□ -2.5
VMP1Q96GC9 MIR5589-201ENST00000579442 60 ntBASIC-0.55□□□□□ -2.5
VMP1Q96GC9 MTND5P18-201ENST00000445624 1801 ntBASIC-0.55□□□□□ -2.5
VMP1Q96GC9 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 RNU6-480P-201ENST00000384332 107 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 RNU6-455P-201ENST00000384681 107 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 MIR652-201ENST00000385278 98 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 AC244090.1-201ENST00000441884 93 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 snoU13.11-201ENST00000459219 104 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 AC096720.1-201ENST00000604441 183 ntBASIC-0.56□□□□□ -2.5
VMP1Q96GC9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.57□□□□□ -2.5
VMP1Q96GC9 RNU6-935P-201ENST00000410371 100 ntBASIC-0.57□□□□□ -2.5
VMP1Q96GC9 RNA5SP272-201ENST00000516095 111 ntBASIC-0.57□□□□□ -2.5
VMP1Q96GC9 MTND5P41-201ENST00000517498 206 ntBASIC-0.57□□□□□ -2.5
VMP1Q96GC9 AP001180.6-201ENST00000584918 159 ntBASIC-0.57□□□□□ -2.5
VMP1Q96GC9 MIR548O2-201ENST00000616090 70 ntBASIC-0.57□□□□□ -2.5
VMP1Q96GC9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.57□□□□□ -2.5
VMP1Q96GC9 FTX_2.1-201ENST00000618816 94 ntBASIC-0.57□□□□□ -2.5
VMP1Q96GC9 SNORD114-11-201ENST00000363738 75 ntBASIC-0.58□□□□□ -2.5
VMP1Q96GC9 RNU6-886P-201ENST00000384319 105 ntBASIC-0.58□□□□□ -2.5
VMP1Q96GC9 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.58□□□□□ -2.5
VMP1Q96GC9 RNU6-426P-201ENST00000516464 97 ntBASIC-0.58□□□□□ -2.5
VMP1Q96GC9 MIR4636-201ENST00000582271 80 ntBASIC-0.58□□□□□ -2.5
VMP1Q96GC9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.59□□□□□ -2.5
VMP1Q96GC9 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.59□□□□□ -2.5
VMP1Q96GC9 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.59□□□□□ -2.5
VMP1Q96GC9 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.59□□□□□ -2.5
VMP1Q96GC9 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
VMP1Q96GC9 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.59□□□□□ -2.5
VMP1Q96GC9 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.6□□□□□ -2.51
VMP1Q96GC9 RNA5SP66-201ENST00000517178 101 ntBASIC-0.6□□□□□ -2.51
VMP1Q96GC9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.6□□□□□ -2.51
VMP1Q96GC9 uc_338.36-201ENST00000622331 158 ntBASIC-0.6□□□□□ -2.51
VMP1Q96GC9 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.61□□□□□ -2.51
VMP1Q96GC9 MIR9-2-201ENST00000384838 87 ntBASIC-0.61□□□□□ -2.51
VMP1Q96GC9 MIR196A2-201ENST00000385189 110 ntBASIC-0.61□□□□□ -2.51
VMP1Q96GC9 MIR577-201ENST00000385196 96 ntBASIC-0.61□□□□□ -2.51
VMP1Q96GC9 MTND4LP9-201ENST00000427694 174 ntBASIC-0.61□□□□□ -2.51
VMP1Q96GC9 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.61□□□□□ -2.51
VMP1Q96GC9 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.61□□□□□ -2.51
VMP1Q96GC9 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.62□□□□□ -2.51
VMP1Q96GC9 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.62□□□□□ -2.51
VMP1Q96GC9 MIR451A-201ENST00000385059 72 ntBASIC-0.62□□□□□ -2.51
VMP1Q96GC9 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.62□□□□□ -2.51
VMP1Q96GC9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.62□□□□□ -2.51
VMP1Q96GC9 AP000676.1-201ENST00000533307 52 ntBASIC-0.62□□□□□ -2.51
VMP1Q96GC9 MIR4694-201ENST00000578534 80 ntBASIC-0.62□□□□□ -2.51
VMP1Q96GC9 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 RNU6-900P-201ENST00000384498 102 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 AC114755.3-201ENST00000481111 251 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 RNU6-75P-201ENST00000515944 104 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 RNU6-772P-201ENST00000516042 105 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 MIR4679-2-201ENST00000578358 77 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 MIR4432-201ENST00000581823 84 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 MIR4493-201ENST00000584016 73 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 AC025521.1-201ENST00000621624 286 ntBASIC-0.63□□□□□ -2.51
VMP1Q96GC9 MIR101-1-201ENST00000362265 75 ntBASIC-0.64□□□□□ -2.51
VMP1Q96GC9 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.64□□□□□ -2.51
VMP1Q96GC9 U3.27-201ENST00000391237 200 ntBASIC-0.64□□□□□ -2.51
VMP1Q96GC9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.64□□□□□ -2.51
VMP1Q96GC9 RPS29P8-201ENST00000445109 171 ntBASIC-0.64□□□□□ -2.51
VMP1Q96GC9 AL035470.1-201ENST00000622571 220 ntBASIC-0.64□□□□□ -2.51
VMP1Q96GC9 AL157777.2-201ENST00000258070 137 ntBASIC-0.65□□□□□ -2.51
VMP1Q96GC9 RNU6-832P-201ENST00000363319 107 ntBASIC-0.65□□□□□ -2.51
VMP1Q96GC9 SNORA49-201ENST00000386157 136 ntBASIC-0.65□□□□□ -2.51
VMP1Q96GC9 SNORA40-201ENST00000388090 126 ntBASIC-0.65□□□□□ -2.51
VMP1Q96GC9 SNORD75.1-201ENST00000408373 60 ntBASIC-0.65□□□□□ -2.51
VMP1Q96GC9 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.65□□□□□ -2.51
VMP1Q96GC9 RNU6-86P-201ENST00000606534 107 ntBASIC-0.65□□□□□ -2.51
VMP1Q96GC9 AC093726.3-201ENST00000637588 150 ntBASIC-0.65□□□□□ -2.51
VMP1Q96GC9 SNORD115-25-201ENST00000362619 82 ntBASIC-0.66□□□□□ -2.52
VMP1Q96GC9 RNY3P2-201ENST00000362918 102 ntBASIC-0.66□□□□□ -2.52
VMP1Q96GC9 RNU6-54P-201ENST00000365563 107 ntBASIC-0.66□□□□□ -2.52
VMP1Q96GC9 RNU7-200P-201ENST00000516105 62 ntBASIC-0.66□□□□□ -2.52
VMP1Q96GC9 RNU6-65P-201ENST00000516332 98 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 251.6 ms