Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.81□□□□□ -2.28
SMC1BQ8NDV3 RNA5SP47-201ENST00000517230 109 ntBASIC0.81□□□□□ -2.28
SMC1BQ8NDV3 AL513043.2-201ENST00000573941 143 ntBASIC0.81□□□□□ -2.28
SMC1BQ8NDV3 SNORD116-10-201ENST00000363791 102 ntBASIC0.8□□□□□ -2.28
SMC1BQ8NDV3 RNY1P8-201ENST00000383970 114 ntBASIC0.79□□□□□ -2.28
SMC1BQ8NDV3 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
SMC1BQ8NDV3 RNU7-104P-201ENST00000459398 79 ntBASIC0.79□□□□□ -2.28
SMC1BQ8NDV3 Y_RNA.648-201ENST00000459455 110 ntBASIC0.79□□□□□ -2.28
SMC1BQ8NDV3 AC092634.7-201ENST00000621022 103 ntBASIC0.79□□□□□ -2.28
SMC1BQ8NDV3 RNA5SP403-201ENST00000363598 108 ntBASIC0.78□□□□□ -2.28
SMC1BQ8NDV3 SNORD58A-201ENST00000383875 65 ntBASIC0.78□□□□□ -2.28
SMC1BQ8NDV3 RNA5SP63-201ENST00000391225 112 ntBASIC0.78□□□□□ -2.28
SMC1BQ8NDV3 MIR548L-201ENST00000408303 86 ntBASIC0.78□□□□□ -2.28
SMC1BQ8NDV3 AC067863.3-201ENST00000624172 122 ntBASIC0.78□□□□□ -2.28
SMC1BQ8NDV3 Y_RNA.348-201ENST00000365403 103 ntBASIC0.77□□□□□ -2.29
SMC1BQ8NDV3 RNA5SP89-201ENST00000410300 108 ntBASIC0.77□□□□□ -2.29
SMC1BQ8NDV3 RNA5SP227-201ENST00000516184 113 ntBASIC0.77□□□□□ -2.29
SMC1BQ8NDV3 RNU6-229P-201ENST00000516614 102 ntBASIC0.77□□□□□ -2.29
SMC1BQ8NDV3 RNU7-161P-201ENST00000517289 62 ntBASIC0.77□□□□□ -2.29
SMC1BQ8NDV3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.77□□□□□ -2.29
SMC1BQ8NDV3 U7.3-201ENST00000616123 62 ntBASIC0.77□□□□□ -2.29
SMC1BQ8NDV3 RNU7-13P-201ENST00000516413 62 ntBASIC0.76□□□□□ -2.29
SMC1BQ8NDV3 TRDV1-202ENST00000621643 102 ntBASIC0.76□□□□□ -2.29
SMC1BQ8NDV3 RNA5SP499-201ENST00000363982 119 ntBASIC0.75□□□□□ -2.29
SMC1BQ8NDV3 SNORD71-201ENST00000411292 86 ntBASIC0.75□□□□□ -2.29
SMC1BQ8NDV3 RNU6-162P-201ENST00000516228 103 ntBASIC0.75□□□□□ -2.29
SMC1BQ8NDV3 RNA5SP268-201ENST00000516828 124 ntBASIC0.75□□□□□ -2.29
SMC1BQ8NDV3 AC243829.6-201ENST00000612652 106 ntBASIC0.75□□□□□ -2.29
SMC1BQ8NDV3 MIR6828-201ENST00000636181 60 ntBASIC0.75□□□□□ -2.29
SMC1BQ8NDV3 RNU6-957P-201ENST00000363652 99 ntBASIC0.74□□□□□ -2.29
SMC1BQ8NDV3 Y_RNA.283-201ENST00000364798 112 ntBASIC0.74□□□□□ -2.29
SMC1BQ8NDV3 snoU13.11-201ENST00000459219 104 ntBASIC0.74□□□□□ -2.29
SMC1BQ8NDV3 RNU6-65P-201ENST00000516332 98 ntBASIC0.74□□□□□ -2.29
SMC1BQ8NDV3 RNU6-1265P-201ENST00000516342 103 ntBASIC0.74□□□□□ -2.29
SMC1BQ8NDV3 MIR4514-201ENST00000581410 57 ntBASIC0.74□□□□□ -2.29
SMC1BQ8NDV3 SNORA36.1-201ENST00000363424 132 ntBASIC0.73□□□□□ -2.29
SMC1BQ8NDV3 RNA5SP517-201ENST00000364724 117 ntBASIC0.73□□□□□ -2.29
SMC1BQ8NDV3 SNORD115-44-201ENST00000365391 82 ntBASIC0.73□□□□□ -2.29
SMC1BQ8NDV3 SNORA8.2-201ENST00000384372 139 ntBASIC0.73□□□□□ -2.29
SMC1BQ8NDV3 RNU6-519P-201ENST00000410590 108 ntBASIC0.73□□□□□ -2.29
SMC1BQ8NDV3 MTATP6P29-201ENST00000415057 132 ntBASIC0.73□□□□□ -2.29
SMC1BQ8NDV3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.73□□□□□ -2.29
SMC1BQ8NDV3 AC018659.1-201ENST00000551083 169 ntBASIC0.73□□□□□ -2.29
SMC1BQ8NDV3 MIR4536-1-201ENST00000583537 88 ntBASIC0.73□□□□□ -2.29
SMC1BQ8NDV3 RNU6-905P-201ENST00000384434 107 ntBASIC0.72□□□□□ -2.29
SMC1BQ8NDV3 SNORA40.8-201ENST00000411034 126 ntBASIC0.72□□□□□ -2.29
SMC1BQ8NDV3 MIR6759-201ENST00000638110 65 ntBASIC0.72□□□□□ -2.29
SMC1BQ8NDV3 RNU6-640P-201ENST00000363693 105 ntBASIC0.71□□□□□ -2.3
SMC1BQ8NDV3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
SMC1BQ8NDV3 Y_RNA.596-201ENST00000410462 109 ntBASIC0.71□□□□□ -2.3
SMC1BQ8NDV3 AL161932.1-201ENST00000437408 146 ntBASIC0.71□□□□□ -2.3
SMC1BQ8NDV3 MIR4636-201ENST00000582271 80 ntBASIC0.71□□□□□ -2.3
SMC1BQ8NDV3 MALAT1.1-201ENST00000618249 95 ntBASIC0.71□□□□□ -2.3
SMC1BQ8NDV3 RNU6-726P-201ENST00000364680 107 ntBASIC0.7□□□□□ -2.3
SMC1BQ8NDV3 Y_RNA.290-201ENST00000364879 114 ntBASIC0.7□□□□□ -2.3
SMC1BQ8NDV3 RNU6-945P-201ENST00000383947 107 ntBASIC0.7□□□□□ -2.3
SMC1BQ8NDV3 RNU7-74P-201ENST00000459104 62 ntBASIC0.7□□□□□ -2.3
SMC1BQ8NDV3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.7□□□□□ -2.3
SMC1BQ8NDV3 AC023932.2-201ENST00000603176 175 ntBASIC0.7□□□□□ -2.3
SMC1BQ8NDV3 Y_RNA.220-201ENST00000364244 109 ntBASIC0.69□□□□□ -2.3
SMC1BQ8NDV3 MIR329-2-201ENST00000385029 84 ntBASIC0.68□□□□□ -2.3
SMC1BQ8NDV3 SNORD41.1-201ENST00000391000 69 ntBASIC0.68□□□□□ -2.3
SMC1BQ8NDV3 RN7SKP12-201ENST00000516275 143 ntBASIC0.68□□□□□ -2.3
SMC1BQ8NDV3 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
SMC1BQ8NDV3 Y_RNA.694-201ENST00000516677 117 ntBASIC0.68□□□□□ -2.3
SMC1BQ8NDV3 MIR3920-201ENST00000581751 86 ntBASIC0.68□□□□□ -2.3
SMC1BQ8NDV3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
SMC1BQ8NDV3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SMC1BQ8NDV3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SMC1BQ8NDV3 MIR518A1-201ENST00000385068 85 ntBASIC0.67□□□□□ -2.3
SMC1BQ8NDV3 SNORA25.18-201ENST00000607153 114 ntBASIC0.67□□□□□ -2.3
SMC1BQ8NDV3 MIR7107-201ENST00000611489 80 ntBASIC0.67□□□□□ -2.3
SMC1BQ8NDV3 U6.100-201ENST00000636230 99 ntBASIC0.67□□□□□ -2.3
SMC1BQ8NDV3 SNORD118-201ENST00000363593 134 ntBASIC0.66□□□□□ -2.3
SMC1BQ8NDV3 SNORD101-201ENST00000384027 73 ntBASIC0.66□□□□□ -2.3
SMC1BQ8NDV3 Y_RNA.609-201ENST00000410669 89 ntBASIC0.66□□□□□ -2.3
SMC1BQ8NDV3 RNU7-85P-201ENST00000458851 63 ntBASIC0.66□□□□□ -2.3
SMC1BQ8NDV3 Y_RNA.190-201ENST00000363964 101 ntBASIC0.65□□□□□ -2.31
SMC1BQ8NDV3 MIR548U-201ENST00000390728 81 ntBASIC0.65□□□□□ -2.31
SMC1BQ8NDV3 SNORD4B-201ENST00000459083 72 ntBASIC0.65□□□□□ -2.31
SMC1BQ8NDV3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.65□□□□□ -2.31
SMC1BQ8NDV3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SMC1BQ8NDV3 RNU6-75P-201ENST00000515944 104 ntBASIC0.64□□□□□ -2.31
SMC1BQ8NDV3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.64□□□□□ -2.31
SMC1BQ8NDV3 MTRNR2L2-201ENST00000604882 87 ntBASIC0.64□□□□□ -2.31
SMC1BQ8NDV3 RNU6-664P-201ENST00000362381 107 ntBASIC0.63□□□□□ -2.31
SMC1BQ8NDV3 Y_RNA.239-201ENST00000364444 113 ntBASIC0.63□□□□□ -2.31
SMC1BQ8NDV3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.63□□□□□ -2.31
SMC1BQ8NDV3 RNY4P30-201ENST00000410216 95 ntBASIC0.63□□□□□ -2.31
SMC1BQ8NDV3 AC114737.2-201ENST00000421583 173 ntBASIC0.63□□□□□ -2.31
SMC1BQ8NDV3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.63□□□□□ -2.31
SMC1BQ8NDV3 MIR488-201ENST00000365739 83 ntBASIC0.62□□□□□ -2.31
SMC1BQ8NDV3 MIR617-201ENST00000385030 97 ntBASIC0.62□□□□□ -2.31
SMC1BQ8NDV3 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
SMC1BQ8NDV3 RNU6-287P-201ENST00000516230 98 ntBASIC0.62□□□□□ -2.31
SMC1BQ8NDV3 AC026421.1-201ENST00000519101 163 ntBASIC0.62□□□□□ -2.31
SMC1BQ8NDV3 MIR4696-201ENST00000581431 70 ntBASIC0.62□□□□□ -2.31
SMC1BQ8NDV3 AL162376.1-201ENST00000624117 175 ntBASIC0.62□□□□□ -2.31
SMC1BQ8NDV3 RNU6-509P-201ENST00000363519 107 ntBASIC0.61□□□□□ -2.31
SMC1BQ8NDV3 Y_RNA.207-201ENST00000364142 106 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 238.4 ms