Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR1-1-201ENST00000362147 71 ntBASIC1.9□□□□□ -2.11
CCDC116Q8IYX3 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
CCDC116Q8IYX3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.9□□□□□ -2.11
CCDC116Q8IYX3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.9□□□□□ -2.11
CCDC116Q8IYX3 RNU6-1039P-201ENST00000383931 107 ntBASIC1.9□□□□□ -2.11
CCDC116Q8IYX3 AC110620.1-201ENST00000416042 228 ntBASIC1.9□□□□□ -2.11
CCDC116Q8IYX3 RNU7-104P-201ENST00000459398 79 ntBASIC1.9□□□□□ -2.11
CCDC116Q8IYX3 NAMPTP3-201ENST00000569273 224 ntBASIC1.9□□□□□ -2.11
CCDC116Q8IYX3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.89□□□□□ -2.11
CCDC116Q8IYX3 SNORD79.1-201ENST00000516069 84 ntBASIC1.89□□□□□ -2.11
CCDC116Q8IYX3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC116Q8IYX3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC116Q8IYX3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
CCDC116Q8IYX3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC116Q8IYX3 RNU6-669P-201ENST00000365575 107 ntBASIC1.88□□□□□ -2.11
CCDC116Q8IYX3 MIR617-201ENST00000385030 97 ntBASIC1.88□□□□□ -2.11
CCDC116Q8IYX3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.88□□□□□ -2.11
CCDC116Q8IYX3 MIR6509-201ENST00000614603 85 ntBASIC1.88□□□□□ -2.11
CCDC116Q8IYX3 MTND4LP1-201ENST00000446263 157 ntBASIC1.87□□□□□ -2.11
CCDC116Q8IYX3 AC008834.1-201ENST00000511612 175 ntBASIC1.87□□□□□ -2.11
CCDC116Q8IYX3 MIR548O2-201ENST00000616090 70 ntBASIC1.87□□□□□ -2.11
CCDC116Q8IYX3 MIR203A-201ENST00000384836 110 ntBASIC1.86□□□□□ -2.11
CCDC116Q8IYX3 MIR1287-201ENST00000408492 90 ntBASIC1.86□□□□□ -2.11
CCDC116Q8IYX3 RNU6-902P-201ENST00000517212 91 ntBASIC1.86□□□□□ -2.11
CCDC116Q8IYX3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
CCDC116Q8IYX3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC116Q8IYX3 RNU6-668P-201ENST00000364180 107 ntBASIC1.85□□□□□ -2.11
CCDC116Q8IYX3 MIR519E-201ENST00000385075 84 ntBASIC1.85□□□□□ -2.11
CCDC116Q8IYX3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
CCDC116Q8IYX3 MIR1827-201ENST00000408549 66 ntBASIC1.85□□□□□ -2.11
CCDC116Q8IYX3 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
CCDC116Q8IYX3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC116Q8IYX3 AC067940.1-201ENST00000458411 300 ntBASIC1.85□□□□□ -2.11
CCDC116Q8IYX3 RNU1-123P-201ENST00000458950 160 ntBASIC1.85□□□□□ -2.11
CCDC116Q8IYX3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC116Q8IYX3 RNU6-54P-201ENST00000365563 107 ntBASIC1.84□□□□□ -2.11
CCDC116Q8IYX3 MIR4285-201ENST00000581001 85 ntBASIC1.84□□□□□ -2.11
CCDC116Q8IYX3 MIR4781-201ENST00000585250 76 ntBASIC1.84□□□□□ -2.11
CCDC116Q8IYX3 RMST_2.1-201ENST00000617263 136 ntBASIC1.84□□□□□ -2.11
CCDC116Q8IYX3 AL136317.1-201ENST00000612653 226 ntBASIC1.83□□□□□ -2.12
CCDC116Q8IYX3 AC067863.3-201ENST00000624172 122 ntBASIC1.83□□□□□ -2.12
CCDC116Q8IYX3 AC073869.9-201ENST00000641610 120 ntBASIC1.83□□□□□ -2.12
CCDC116Q8IYX3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.82□□□□□ -2.12
CCDC116Q8IYX3 MIR633-201ENST00000384821 98 ntBASIC1.82□□□□□ -2.12
CCDC116Q8IYX3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.82□□□□□ -2.12
CCDC116Q8IYX3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC116Q8IYX3 SNORA70.22-201ENST00000517160 124 ntBASIC1.81□□□□□ -2.12
CCDC116Q8IYX3 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
CCDC116Q8IYX3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CCDC116Q8IYX3 MIR3657-201ENST00000584818 117 ntBASIC1.8□□□□□ -2.12
CCDC116Q8IYX3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC116Q8IYX3 ZNF355P-201ENST00000427301 3216 ntBASIC1.79□□□□□ -2.12
CCDC116Q8IYX3 RNU6V-201ENST00000384105 107 ntBASIC1.79□□□□□ -2.12
CCDC116Q8IYX3 MIR644A-201ENST00000385262 94 ntBASIC1.79□□□□□ -2.12
CCDC116Q8IYX3 MIR4498-201ENST00000577599 66 ntBASIC1.79□□□□□ -2.12
CCDC116Q8IYX3 Y_RNA.375-201ENST00000365625 101 ntBASIC1.78□□□□□ -2.12
CCDC116Q8IYX3 AC079150.2-201ENST00000443733 78 ntBASIC1.78□□□□□ -2.12
CCDC116Q8IYX3 SNORD42B-201ENST00000458893 67 ntBASIC1.78□□□□□ -2.12
CCDC116Q8IYX3 AC002350.1-201ENST00000490759 375 ntBASIC1.78□□□□□ -2.12
CCDC116Q8IYX3 RNU6-542P-201ENST00000516405 103 ntBASIC1.78□□□□□ -2.12
CCDC116Q8IYX3 RNU6-645P-201ENST00000364649 106 ntBASIC1.77□□□□□ -2.13
CCDC116Q8IYX3 RNA5SP117-201ENST00000365294 118 ntBASIC1.77□□□□□ -2.13
CCDC116Q8IYX3 SNORD12-201ENST00000391002 90 ntBASIC1.77□□□□□ -2.13
CCDC116Q8IYX3 RNU7-74P-201ENST00000459104 62 ntBASIC1.77□□□□□ -2.13
CCDC116Q8IYX3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC116Q8IYX3 RNU6-260P-201ENST00000384092 107 ntBASIC1.76□□□□□ -2.13
CCDC116Q8IYX3 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
CCDC116Q8IYX3 RNU6-135P-201ENST00000516769 101 ntBASIC1.76□□□□□ -2.13
CCDC116Q8IYX3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC116Q8IYX3 MIR7-2-201ENST00000384970 110 ntBASIC1.75□□□□□ -2.13
CCDC116Q8IYX3 MIR222-201ENST00000384992 110 ntBASIC1.75□□□□□ -2.13
CCDC116Q8IYX3 RNU6-141P-201ENST00000410499 105 ntBASIC1.75□□□□□ -2.13
CCDC116Q8IYX3 MIR4639-201ENST00000584938 69 ntBASIC1.75□□□□□ -2.13
CCDC116Q8IYX3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.75□□□□□ -2.13
CCDC116Q8IYX3 AC092634.7-201ENST00000621022 103 ntBASIC1.75□□□□□ -2.13
CCDC116Q8IYX3 SNORA7.1-201ENST00000363750 139 ntBASIC1.74□□□□□ -2.13
CCDC116Q8IYX3 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
CCDC116Q8IYX3 RNU6-614P-201ENST00000384369 107 ntBASIC1.74□□□□□ -2.13
CCDC116Q8IYX3 SNORD41.1-201ENST00000391000 69 ntBASIC1.74□□□□□ -2.13
CCDC116Q8IYX3 U6.59-201ENST00000615686 107 ntBASIC1.74□□□□□ -2.13
CCDC116Q8IYX3 AC244669.1-204ENST00000621564 178 ntBASIC1.74□□□□□ -2.13
CCDC116Q8IYX3 SNORD28-201ENST00000384706 75 ntBASIC1.73□□□□□ -2.13
CCDC116Q8IYX3 AC002429.1-201ENST00000437672 148 ntBASIC1.73□□□□□ -2.13
CCDC116Q8IYX3 AC003989.2-201ENST00000440224 169 ntBASIC1.73□□□□□ -2.13
CCDC116Q8IYX3 RNU6-469P-201ENST00000516253 101 ntBASIC1.73□□□□□ -2.13
CCDC116Q8IYX3 SNORA2.1-201ENST00000363089 137 ntBASIC1.72□□□□□ -2.13
CCDC116Q8IYX3 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
CCDC116Q8IYX3 MIR548L-201ENST00000408303 86 ntBASIC1.72□□□□□ -2.13
CCDC116Q8IYX3 RNU6-295P-201ENST00000516901 104 ntBASIC1.72□□□□□ -2.13
CCDC116Q8IYX3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CCDC116Q8IYX3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
CCDC116Q8IYX3 SNORA25.5-201ENST00000363782 126 ntBASIC1.71□□□□□ -2.14
CCDC116Q8IYX3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.71□□□□□ -2.14
CCDC116Q8IYX3 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
CCDC116Q8IYX3 MIR583-201ENST00000384846 75 ntBASIC1.71□□□□□ -2.14
CCDC116Q8IYX3 MT-TY-201ENST00000387409 66 ntBASIC1.71□□□□□ -2.14
CCDC116Q8IYX3 RNA5SP182-201ENST00000516064 82 ntBASIC1.71□□□□□ -2.14
CCDC116Q8IYX3 RNA5SP147-201ENST00000516493 109 ntBASIC1.71□□□□□ -2.14
CCDC116Q8IYX3 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
CCDC116Q8IYX3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 241.8 ms