Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 RNU6-54P-201ENST00000365563 107 ntBASIC-1.45□□□□□ -2.64
SSX9Q7RTT3 RNU6-476P-201ENST00000384726 107 ntBASIC-1.45□□□□□ -2.64
SSX9Q7RTT3 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.45□□□□□ -2.64
SSX9Q7RTT3 RNU6-918P-201ENST00000391219 106 ntBASIC-1.45□□□□□ -2.64
SSX9Q7RTT3 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.46□□□□□ -2.64
SSX9Q7RTT3 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.46□□□□□ -2.64
SSX9Q7RTT3 RNU6-312P-201ENST00000364629 107 ntBASIC-1.46□□□□□ -2.64
SSX9Q7RTT3 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.46□□□□□ -2.64
SSX9Q7RTT3 MIR517B-201ENST00000385102 67 ntBASIC-1.46□□□□□ -2.64
SSX9Q7RTT3 RNU6-935P-201ENST00000410371 100 ntBASIC-1.46□□□□□ -2.64
SSX9Q7RTT3 AC022137.1-201ENST00000483735 151 ntBASIC-1.46□□□□□ -2.64
SSX9Q7RTT3 MIR6854-201ENST00000614935 69 ntBASIC-1.46□□□□□ -2.64
SSX9Q7RTT3 AL627230.5-201ENST00000619807 58 ntBASIC-1.46□□□□□ -2.64
SSX9Q7RTT3 SNORD114-4-201ENST00000363962 75 ntBASIC-1.47□□□□□ -2.64
SSX9Q7RTT3 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.47□□□□□ -2.64
SSX9Q7RTT3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.47□□□□□ -2.64
SSX9Q7RTT3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.47□□□□□ -2.64
SSX9Q7RTT3 AP000533.3-201ENST00000447704 118 ntBASIC-1.47□□□□□ -2.64
SSX9Q7RTT3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.47□□□□□ -2.64
SSX9Q7RTT3 AP002392.1-201ENST00000537692 208 ntBASIC-1.47□□□□□ -2.64
SSX9Q7RTT3 SNORD38.1-201ENST00000363863 68 ntBASIC-1.48□□□□□ -2.65
SSX9Q7RTT3 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.48□□□□□ -2.65
SSX9Q7RTT3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.48□□□□□ -2.65
SSX9Q7RTT3 RN7SKP19-201ENST00000516016 252 ntBASIC-1.48□□□□□ -2.65
SSX9Q7RTT3 MIR3115-201ENST00000577915 68 ntBASIC-1.48□□□□□ -2.65
SSX9Q7RTT3 MIR3658-201ENST00000636291 56 ntBASIC-1.48□□□□□ -2.65
SSX9Q7RTT3 RNU6-235P-201ENST00000362644 107 ntBASIC-1.49□□□□□ -2.65
SSX9Q7RTT3 MIR451A-201ENST00000385059 72 ntBASIC-1.49□□□□□ -2.65
SSX9Q7RTT3 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.5□□□□□ -2.65
SSX9Q7RTT3 MIR759-201ENST00000390224 91 ntBASIC-1.5□□□□□ -2.65
SSX9Q7RTT3 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.5□□□□□ -2.65
SSX9Q7RTT3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.5□□□□□ -2.65
SSX9Q7RTT3 MIR8068-201ENST00000618032 68 ntBASIC-1.5□□□□□ -2.65
SSX9Q7RTT3 snoR1.1-201ENST00000628177 80 ntBASIC-1.5□□□□□ -2.65
SSX9Q7RTT3 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.51□□□□□ -2.65
SSX9Q7RTT3 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.51□□□□□ -2.65
SSX9Q7RTT3 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.51□□□□□ -2.65
SSX9Q7RTT3 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.52□□□□□ -2.65
SSX9Q7RTT3 SNORD74.6-201ENST00000364796 70 ntBASIC-1.52□□□□□ -2.65
SSX9Q7RTT3 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.52□□□□□ -2.65
SSX9Q7RTT3 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.52□□□□□ -2.65
SSX9Q7RTT3 MIR4306-201ENST00000583390 91 ntBASIC-1.52□□□□□ -2.65
SSX9Q7RTT3 SNORD64-201ENST00000386683 67 ntBASIC-1.53□□□□□ -2.65
SSX9Q7RTT3 RNU6-239P-201ENST00000390990 99 ntBASIC-1.53□□□□□ -2.65
SSX9Q7RTT3 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.53□□□□□ -2.65
SSX9Q7RTT3 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.53□□□□□ -2.65
SSX9Q7RTT3 SNORD58.1-201ENST00000391313 66 ntBASIC-1.54□□□□□ -2.66
SSX9Q7RTT3 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.54□□□□□ -2.66
SSX9Q7RTT3 RNU6-363P-201ENST00000362895 105 ntBASIC-1.55□□□□□ -2.66
SSX9Q7RTT3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.55□□□□□ -2.66
SSX9Q7RTT3 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.55□□□□□ -2.66
SSX9Q7RTT3 U3.27-201ENST00000391237 200 ntBASIC-1.55□□□□□ -2.66
SSX9Q7RTT3 SNORD42B-201ENST00000458893 67 ntBASIC-1.55□□□□□ -2.66
SSX9Q7RTT3 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.55□□□□□ -2.66
SSX9Q7RTT3 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.56□□□□□ -2.66
SSX9Q7RTT3 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.56□□□□□ -2.66
SSX9Q7RTT3 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.56□□□□□ -2.66
SSX9Q7RTT3 MTCYBP6-201ENST00000441810 138 ntBASIC-1.56□□□□□ -2.66
SSX9Q7RTT3 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.56□□□□□ -2.66
SSX9Q7RTT3 MIR382-201ENST00000637119 76 ntBASIC-1.56□□□□□ -2.66
SSX9Q7RTT3 MIR147A-201ENST00000385079 72 ntBASIC-1.57□□□□□ -2.66
SSX9Q7RTT3 RNU4-71P-201ENST00000516258 113 ntBASIC-1.57□□□□□ -2.66
SSX9Q7RTT3 MIR198-201ENST00000637333 62 ntBASIC-1.57□□□□□ -2.66
SSX9Q7RTT3 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 RNU6-905P-201ENST00000384434 107 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 MIR548D2-201ENST00000384955 97 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 AL353813.1-201ENST00000440700 253 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 RNU7-121P-201ENST00000516604 62 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 RNU6-719P-201ENST00000516671 104 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 MIR3121-201ENST00000579680 77 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 AC044792.1-201ENST00000593294 196 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 MIR6773-201ENST00000612812 74 ntBASIC-1.58□□□□□ -2.66
SSX9Q7RTT3 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.59□□□□□ -2.66
SSX9Q7RTT3 RNU6-409P-201ENST00000384114 104 ntBASIC-1.59□□□□□ -2.66
SSX9Q7RTT3 MIR548F4-201ENST00000408515 105 ntBASIC-1.59□□□□□ -2.66
SSX9Q7RTT3 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.59□□□□□ -2.66
SSX9Q7RTT3 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.6□□□□□ -2.67
SSX9Q7RTT3 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.6□□□□□ -2.67
SSX9Q7RTT3 MIR601-201ENST00000385256 79 ntBASIC-1.6□□□□□ -2.67
SSX9Q7RTT3 MIR1263-201ENST00000408324 86 ntBASIC-1.6□□□□□ -2.67
SSX9Q7RTT3 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.61□□□□□ -2.67
SSX9Q7RTT3 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.61□□□□□ -2.67
SSX9Q7RTT3 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.61□□□□□ -2.67
SSX9Q7RTT3 RNU6-592P-201ENST00000411333 103 ntBASIC-1.61□□□□□ -2.67
SSX9Q7RTT3 SNORD18.2-201ENST00000459604 70 ntBASIC-1.61□□□□□ -2.67
SSX9Q7RTT3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.61□□□□□ -2.67
SSX9Q7RTT3 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.61□□□□□ -2.67
SSX9Q7RTT3 AL442128.1-201ENST00000615151 90 ntBASIC-1.61□□□□□ -2.67
SSX9Q7RTT3 MIR1468-201ENST00000410600 86 ntBASIC-1.62□□□□□ -2.67
SSX9Q7RTT3 FGF7P7-201ENST00000514120 227 ntBASIC-1.62□□□□□ -2.67
SSX9Q7RTT3 AC130289.1-201ENST00000577321 73 ntBASIC-1.62□□□□□ -2.67
SSX9Q7RTT3 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.63□□□□□ -2.67
SSX9Q7RTT3 MIRLET7B-201ENST00000385140 83 ntBASIC-1.63□□□□□ -2.67
SSX9Q7RTT3 RNU6-75P-201ENST00000515944 104 ntBASIC-1.63□□□□□ -2.67
SSX9Q7RTT3 AC022559.1-201ENST00000520905 205 ntBASIC-1.63□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 1306 ms