Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNORD115-44-201ENST00000365391 82 ntBASIC1.91□□□□□ -2.1
FOXR1Q6PIV2 Y_RNA.375-201ENST00000365625 101 ntBASIC1.91□□□□□ -2.1
FOXR1Q6PIV2 MIR4287-201ENST00000579398 78 ntBASIC1.91□□□□□ -2.1
FOXR1Q6PIV2 MIR4804-201ENST00000581683 73 ntBASIC1.91□□□□□ -2.1
FOXR1Q6PIV2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
FOXR1Q6PIV2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 RNU7-56P-201ENST00000458744 62 ntBASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 RNU7-24P-201ENST00000458867 62 ntBASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 SNORD42B-201ENST00000458893 67 ntBASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 SNORA31.2-201ENST00000516019 134 ntBASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 SNORA40.17-201ENST00000517256 115 ntBASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 MIR466-201ENST00000580653 84 ntBASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 uc_338.16-201ENST00000621804 95 ntBASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.9□□□□□ -2.11
FOXR1Q6PIV2 SNORD111-201ENST00000408139 94 ntBASIC1.89□□□□□ -2.11
FOXR1Q6PIV2 AC108667.1-201ENST00000428618 249 ntBASIC1.89□□□□□ -2.11
FOXR1Q6PIV2 MTND4LP1-201ENST00000446263 157 ntBASIC1.89□□□□□ -2.11
FOXR1Q6PIV2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.89□□□□□ -2.11
FOXR1Q6PIV2 MIR3657-201ENST00000584818 117 ntBASIC1.89□□□□□ -2.11
FOXR1Q6PIV2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
FOXR1Q6PIV2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
FOXR1Q6PIV2 RNU6-645P-201ENST00000364649 106 ntBASIC1.88□□□□□ -2.11
FOXR1Q6PIV2 RNU6-542P-201ENST00000516405 103 ntBASIC1.88□□□□□ -2.11
FOXR1Q6PIV2 SNORA25.15-201ENST00000516487 89 ntBASIC1.88□□□□□ -2.11
FOXR1Q6PIV2 AC073869.9-201ENST00000641610 120 ntBASIC1.88□□□□□ -2.11
FOXR1Q6PIV2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 SNORA25.5-201ENST00000363782 126 ntBASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 MIR519E-201ENST00000385075 84 ntBASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 MIR4419B-201ENST00000577260 68 ntBASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 MIR8081-201ENST00000611533 95 ntBASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 MIR548O2-201ENST00000616090 70 ntBASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 MIR7978-201ENST00000636158 59 ntBASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
FOXR1Q6PIV2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
FOXR1Q6PIV2 RNU7-104P-201ENST00000459398 79 ntBASIC1.86□□□□□ -2.11
FOXR1Q6PIV2 RNA5SP182-201ENST00000516064 82 ntBASIC1.86□□□□□ -2.11
FOXR1Q6PIV2 RNU6-990P-201ENST00000364385 104 ntBASIC1.85□□□□□ -2.11
FOXR1Q6PIV2 RNU1-123P-201ENST00000458950 160 ntBASIC1.85□□□□□ -2.11
FOXR1Q6PIV2 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
FOXR1Q6PIV2 RNU7-21P-201ENST00000459430 62 ntBASIC1.85□□□□□ -2.11
FOXR1Q6PIV2 RNA5SP147-201ENST00000516493 109 ntBASIC1.85□□□□□ -2.11
FOXR1Q6PIV2 MIR4781-201ENST00000585250 76 ntBASIC1.85□□□□□ -2.11
FOXR1Q6PIV2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 MIR378A-201ENST00000362177 66 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 SNORD113-4-201ENST00000364802 75 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 RNA5SP190-201ENST00000365222 118 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 RNU6V-201ENST00000384105 107 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 MIR617-201ENST00000385030 97 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 AC067940.1-201ENST00000458411 300 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 SCARNA21.1-201ENST00000515996 128 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 RN7SKP88-201ENST00000516847 250 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 7SK.8-201ENST00000612110 250 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 7SK.11-201ENST00000615477 250 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 7SK.13-201ENST00000622040 250 ntBASIC1.84□□□□□ -2.11
FOXR1Q6PIV2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
FOXR1Q6PIV2 RNU6-260P-201ENST00000384092 107 ntBASIC1.83□□□□□ -2.12
FOXR1Q6PIV2 SNORA17.3-201ENST00000391159 129 ntBASIC1.83□□□□□ -2.12
FOXR1Q6PIV2 RNA5SP299-201ENST00000391203 116 ntBASIC1.83□□□□□ -2.12
FOXR1Q6PIV2 MIR4498-201ENST00000577599 66 ntBASIC1.83□□□□□ -2.12
FOXR1Q6PIV2 AC084768.2-201ENST00000622736 221 ntBASIC1.83□□□□□ -2.12
FOXR1Q6PIV2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
FOXR1Q6PIV2 MIR30A-201ENST00000385092 71 ntBASIC1.82□□□□□ -2.12
FOXR1Q6PIV2 MIR100-201ENST00000385259 80 ntBASIC1.82□□□□□ -2.12
FOXR1Q6PIV2 MIR676-201ENST00000390702 67 ntBASIC1.82□□□□□ -2.12
FOXR1Q6PIV2 RNU1-119P-201ENST00000391122 165 ntBASIC1.82□□□□□ -2.12
FOXR1Q6PIV2 RNU6-656P-201ENST00000516785 107 ntBASIC1.82□□□□□ -2.12
FOXR1Q6PIV2 AL136317.1-201ENST00000612653 226 ntBASIC1.82□□□□□ -2.12
FOXR1Q6PIV2 MIR520F-201ENST00000384824 87 ntBASIC1.81□□□□□ -2.12
FOXR1Q6PIV2 RNU6-910P-201ENST00000390844 107 ntBASIC1.81□□□□□ -2.12
FOXR1Q6PIV2 SNORA75.1-201ENST00000391130 148 ntBASIC1.81□□□□□ -2.12
FOXR1Q6PIV2 RNU6-994P-201ENST00000410507 111 ntBASIC1.81□□□□□ -2.12
FOXR1Q6PIV2 ZNF355P-201ENST00000427301 3216 ntBASIC1.8□□□□□ -2.12
FOXR1Q6PIV2 MIR644A-201ENST00000385262 94 ntBASIC1.8□□□□□ -2.12
FOXR1Q6PIV2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.8□□□□□ -2.12
FOXR1Q6PIV2 AL591704.2-201ENST00000421658 181 ntBASIC1.8□□□□□ -2.12
FOXR1Q6PIV2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.79□□□□□ -2.12
FOXR1Q6PIV2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXR1Q6PIV2 RNU6-940P-201ENST00000363433 104 ntBASIC1.78□□□□□ -2.12
FOXR1Q6PIV2 snoU13.31-201ENST00000607291 104 ntBASIC1.78□□□□□ -2.12
FOXR1Q6PIV2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXR1Q6PIV2 SNORD33-201ENST00000362761 85 ntBASIC1.77□□□□□ -2.13
FOXR1Q6PIV2 MIR1287-201ENST00000408492 90 ntBASIC1.77□□□□□ -2.13
FOXR1Q6PIV2 RNU6-902P-201ENST00000517212 91 ntBASIC1.77□□□□□ -2.13
FOXR1Q6PIV2 MIR548V-201ENST00000584165 80 ntBASIC1.77□□□□□ -2.13
FOXR1Q6PIV2 AC067863.3-201ENST00000624172 122 ntBASIC1.77□□□□□ -2.13
FOXR1Q6PIV2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
FOXR1Q6PIV2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
FOXR1Q6PIV2 MIR1-1-201ENST00000362147 71 ntBASIC1.76□□□□□ -2.13
FOXR1Q6PIV2 SNORD79.1-201ENST00000516069 84 ntBASIC1.76□□□□□ -2.13
FOXR1Q6PIV2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
FOXR1Q6PIV2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.75□□□□□ -2.13
FOXR1Q6PIV2 SNORA80D-201ENST00000384488 135 ntBASIC1.75□□□□□ -2.13
FOXR1Q6PIV2 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms