Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 MIR548G-201ENST00000408442 89 ntBASIC-0.54□□□□□ -2.5
ATL3Q6DD88 SNORD38.1-201ENST00000363863 68 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 SNORD114-29-201ENST00000364819 70 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 SNORD14C-201ENST00000365382 88 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 MIR539-201ENST00000365690 78 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 MIR196A2-201ENST00000385189 110 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 MT-TG-201ENST00000387429 68 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 MIR1263-201ENST00000408324 86 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 SPINT5P-201ENST00000448174 155 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 AC007012.1-201ENST00000567192 175 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 AC004792.1-201ENST00000614523 137 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 AL512310.12-203ENST00000640543 90 ntBASIC-0.55□□□□□ -2.5
ATL3Q6DD88 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.56□□□□□ -2.5
ATL3Q6DD88 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.56□□□□□ -2.5
ATL3Q6DD88 RNU6-957P-201ENST00000363652 99 ntBASIC-0.56□□□□□ -2.5
ATL3Q6DD88 MIR1468-201ENST00000410600 86 ntBASIC-0.56□□□□□ -2.5
ATL3Q6DD88 AL158147.1-201ENST00000443970 75 ntBASIC-0.56□□□□□ -2.5
ATL3Q6DD88 SNORD126-201ENST00000459475 77 ntBASIC-0.56□□□□□ -2.5
ATL3Q6DD88 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.56□□□□□ -2.5
ATL3Q6DD88 MIR4263-201ENST00000584745 83 ntBASIC-0.56□□□□□ -2.5
ATL3Q6DD88 RNU4-32P-201ENST00000363404 141 ntBASIC-0.57□□□□□ -2.5
ATL3Q6DD88 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.57□□□□□ -2.5
ATL3Q6DD88 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.57□□□□□ -2.5
ATL3Q6DD88 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.57□□□□□ -2.5
ATL3Q6DD88 RNU6-154P-201ENST00000384306 106 ntBASIC-0.57□□□□□ -2.5
ATL3Q6DD88 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.57□□□□□ -2.5
ATL3Q6DD88 MIR4788-201ENST00000639104 80 ntBASIC-0.57□□□□□ -2.5
ATL3Q6DD88 RNU6-235P-201ENST00000362644 107 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 MT-TQ-201ENST00000387372 72 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 MIR513C-201ENST00000401352 84 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.58□□□□□ -2.5
ATL3Q6DD88 RNU6-781P-201ENST00000516377 101 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 RNU6-388P-201ENST00000517012 105 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 RNU6-389P-201ENST00000517048 105 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 MIR4719-201ENST00000585233 84 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.58□□□□□ -2.5
ATL3Q6DD88 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.59□□□□□ -2.5
ATL3Q6DD88 MIR548X2-201ENST00000579776 100 ntBASIC-0.59□□□□□ -2.5
ATL3Q6DD88 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.6□□□□□ -2.51
ATL3Q6DD88 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.6□□□□□ -2.51
ATL3Q6DD88 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.6□□□□□ -2.51
ATL3Q6DD88 MIR4696-201ENST00000581431 70 ntBASIC-0.6□□□□□ -2.51
ATL3Q6DD88 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.61□□□□□ -2.51
ATL3Q6DD88 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.61□□□□□ -2.51
ATL3Q6DD88 RNU6-409P-201ENST00000384114 104 ntBASIC-0.61□□□□□ -2.51
ATL3Q6DD88 MIR652-201ENST00000385278 98 ntBASIC-0.61□□□□□ -2.51
ATL3Q6DD88 SNX3P1X-201ENST00000414887 175 ntBASIC-0.61□□□□□ -2.51
ATL3Q6DD88 FTX_2.1-201ENST00000618816 94 ntBASIC-0.61□□□□□ -2.51
ATL3Q6DD88 AC099654.10-201ENST00000640395 161 ntBASIC-0.61□□□□□ -2.51
ATL3Q6DD88 MIR20A-201ENST00000362279 71 ntBASIC-0.62□□□□□ -2.51
ATL3Q6DD88 RNU6-664P-201ENST00000362381 107 ntBASIC-0.62□□□□□ -2.51
ATL3Q6DD88 SNORD116-18-201ENST00000383961 92 ntBASIC-0.62□□□□□ -2.51
ATL3Q6DD88 MIR3144-201ENST00000579460 79 ntBASIC-0.62□□□□□ -2.51
ATL3Q6DD88 AL442128.1-201ENST00000615151 90 ntBASIC-0.62□□□□□ -2.51
ATL3Q6DD88 MIR548O2-201ENST00000616090 70 ntBASIC-0.62□□□□□ -2.51
ATL3Q6DD88 RNY4P6-201ENST00000363667 96 ntBASIC-0.63□□□□□ -2.51
ATL3Q6DD88 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.63□□□□□ -2.51
ATL3Q6DD88 RNU6-804P-201ENST00000384286 107 ntBASIC-0.63□□□□□ -2.51
ATL3Q6DD88 U7.2-201ENST00000607576 63 ntBASIC-0.63□□□□□ -2.51
ATL3Q6DD88 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.64□□□□□ -2.51
ATL3Q6DD88 SNORD114-11-201ENST00000363738 75 ntBASIC-0.64□□□□□ -2.51
ATL3Q6DD88 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.64□□□□□ -2.51
ATL3Q6DD88 SNORD101-201ENST00000384027 73 ntBASIC-0.64□□□□□ -2.51
ATL3Q6DD88 MIR569-201ENST00000385228 96 ntBASIC-0.64□□□□□ -2.51
ATL3Q6DD88 RNU6-284P-201ENST00000411105 106 ntBASIC-0.64□□□□□ -2.51
ATL3Q6DD88 AC244090.1-201ENST00000441884 93 ntBASIC-0.64□□□□□ -2.51
ATL3Q6DD88 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.64□□□□□ -2.51
ATL3Q6DD88 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.64□□□□□ -2.51
ATL3Q6DD88 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.65□□□□□ -2.51
ATL3Q6DD88 MIR9-2-201ENST00000384838 87 ntBASIC-0.65□□□□□ -2.51
ATL3Q6DD88 MIR216B-201ENST00000390186 82 ntBASIC-0.65□□□□□ -2.51
ATL3Q6DD88 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.66□□□□□ -2.52
ATL3Q6DD88 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.66□□□□□ -2.52
ATL3Q6DD88 RNU6-455P-201ENST00000384681 107 ntBASIC-0.66□□□□□ -2.52
ATL3Q6DD88 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
ATL3Q6DD88 MIR4320-201ENST00000636981 65 ntBASIC-0.66□□□□□ -2.52
ATL3Q6DD88 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.67□□□□□ -2.52
ATL3Q6DD88 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.67□□□□□ -2.52
ATL3Q6DD88 RNU6-816P-201ENST00000390914 107 ntBASIC-0.67□□□□□ -2.52
ATL3Q6DD88 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.67□□□□□ -2.52
ATL3Q6DD88 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.67□□□□□ -2.52
ATL3Q6DD88 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.67□□□□□ -2.52
ATL3Q6DD88 AC145423.2-201ENST00000610631 239 ntBASIC-0.67□□□□□ -2.52
ATL3Q6DD88 AC025166.1-201ENST00000612411 163 ntBASIC-0.67□□□□□ -2.52
ATL3Q6DD88 MTND5P18-201ENST00000445624 1801 ntBASIC-0.67□□□□□ -2.52
ATL3Q6DD88 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.68□□□□□ -2.52
ATL3Q6DD88 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.68□□□□□ -2.52
ATL3Q6DD88 MIR587-201ENST00000384845 96 ntBASIC-0.68□□□□□ -2.52
ATL3Q6DD88 RNU6-466P-201ENST00000391224 103 ntBASIC-0.68□□□□□ -2.52
ATL3Q6DD88 RNA5SP66-201ENST00000517178 101 ntBASIC-0.68□□□□□ -2.52
ATL3Q6DD88 AL391099.1-201ENST00000624635 187 ntBASIC-0.68□□□□□ -2.52
ATL3Q6DD88 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.68□□□□□ -2.52
ATL3Q6DD88 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.69□□□□□ -2.52
ATL3Q6DD88 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.69□□□□□ -2.52
ATL3Q6DD88 SNORD58C-201ENST00000365223 64 ntBASIC-0.69□□□□□ -2.52
ATL3Q6DD88 RNU6-480P-201ENST00000384332 107 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 796.5 ms