Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-165P-201ENST00000517170 99 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 MIR4676-201ENST00000583078 72 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 AC092634.7-201ENST00000621022 103 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.16□□□□□ -2.06
RC3H1Q5TC82 SNORD1A-201ENST00000364968 72 ntBASIC2.16□□□□□ -2.06
RC3H1Q5TC82 Y_RNA.375-201ENST00000365625 101 ntBASIC2.16□□□□□ -2.06
RC3H1Q5TC82 RNU7-13P-201ENST00000516413 62 ntBASIC2.16□□□□□ -2.06
RC3H1Q5TC82 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RC3H1Q5TC82 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
RC3H1Q5TC82 AC019176.1-201ENST00000518519 225 ntBASIC2.15□□□□□ -2.07
RC3H1Q5TC82 AC012493.3-201ENST00000604494 112 ntBASIC2.15□□□□□ -2.07
RC3H1Q5TC82 MIR6509-201ENST00000614603 85 ntBASIC2.15□□□□□ -2.07
RC3H1Q5TC82 AC027335.2-201ENST00000624030 375 ntBASIC2.15□□□□□ -2.07
RC3H1Q5TC82 AC073869.9-201ENST00000641610 120 ntBASIC2.15□□□□□ -2.07
RC3H1Q5TC82 MIR216B-201ENST00000390186 82 ntBASIC2.14□□□□□ -2.07
RC3H1Q5TC82 MIR938-201ENST00000401216 83 ntBASIC2.14□□□□□ -2.07
RC3H1Q5TC82 SNORD111-201ENST00000408139 94 ntBASIC2.14□□□□□ -2.07
RC3H1Q5TC82 snoU13.9-201ENST00000458927 103 ntBASIC2.14□□□□□ -2.07
RC3H1Q5TC82 AC079140.2-201ENST00000506193 142 ntBASIC2.14□□□□□ -2.07
RC3H1Q5TC82 RNU7-40P-201ENST00000516397 64 ntBASIC2.14□□□□□ -2.07
RC3H1Q5TC82 SNORA44.1-201ENST00000517031 108 ntBASIC2.14□□□□□ -2.07
RC3H1Q5TC82 BX248123.2-201ENST00000606318 124 ntBASIC2.14□□□□□ -2.07
RC3H1Q5TC82 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
RC3H1Q5TC82 SNORD33-201ENST00000362761 85 ntBASIC2.13□□□□□ -2.07
RC3H1Q5TC82 RNU6-392P-201ENST00000364926 101 ntBASIC2.13□□□□□ -2.07
RC3H1Q5TC82 RNU6-1065P-201ENST00000384513 106 ntBASIC2.13□□□□□ -2.07
RC3H1Q5TC82 RNU7-102P-201ENST00000458948 62 ntBASIC2.13□□□□□ -2.07
RC3H1Q5TC82 NAMPTP3-201ENST00000569273 224 ntBASIC2.13□□□□□ -2.07
RC3H1Q5TC82 MIR4419B-201ENST00000577260 68 ntBASIC2.13□□□□□ -2.07
RC3H1Q5TC82 MIR548AG2-201ENST00000581228 64 ntBASIC2.13□□□□□ -2.07
RC3H1Q5TC82 AC106800.4-201ENST00000614905 153 ntBASIC2.13□□□□□ -2.07
RC3H1Q5TC82 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
RC3H1Q5TC82 RNU6-1079P-201ENST00000362861 110 ntBASIC2.12□□□□□ -2.07
RC3H1Q5TC82 SNORA25.5-201ENST00000363782 126 ntBASIC2.12□□□□□ -2.07
RC3H1Q5TC82 RNU6-1126P-201ENST00000384002 107 ntBASIC2.12□□□□□ -2.07
RC3H1Q5TC82 MIR466-201ENST00000580653 84 ntBASIC2.12□□□□□ -2.07
RC3H1Q5TC82 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
RC3H1Q5TC82 MIR203A-201ENST00000384836 110 ntBASIC2.11□□□□□ -2.07
RC3H1Q5TC82 SNORA75.2-201ENST00000391138 150 ntBASIC2.11□□□□□ -2.07
RC3H1Q5TC82 SNORA75.3-201ENST00000391231 150 ntBASIC2.11□□□□□ -2.07
RC3H1Q5TC82 AC048334.1-201ENST00000477975 159 ntBASIC2.11□□□□□ -2.07
RC3H1Q5TC82 RNU6-940P-201ENST00000363433 104 ntBASIC2.1□□□□□ -2.07
RC3H1Q5TC82 RNA5SP403-201ENST00000363598 108 ntBASIC2.1□□□□□ -2.07
RC3H1Q5TC82 RNA5SP192-201ENST00000364404 120 ntBASIC2.1□□□□□ -2.07
RC3H1Q5TC82 MIR1276-201ENST00000408707 83 ntBASIC2.1□□□□□ -2.07
RC3H1Q5TC82 MIR3937-201ENST00000580135 106 ntBASIC2.1□□□□□ -2.07
RC3H1Q5TC82 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
RC3H1Q5TC82 Y_RNA.118-201ENST00000363300 101 ntBASIC2.09□□□□□ -2.07
RC3H1Q5TC82 Y_RNA.327-201ENST00000365201 102 ntBASIC2.09□□□□□ -2.07
RC3H1Q5TC82 AC023827.1-201ENST00000569247 97 ntBASIC2.09□□□□□ -2.07
RC3H1Q5TC82 SNORD53B-201ENST00000577887 78 ntBASIC2.09□□□□□ -2.07
RC3H1Q5TC82 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RC3H1Q5TC82 RNU6-645P-201ENST00000364649 106 ntBASIC2.08□□□□□ -2.08
RC3H1Q5TC82 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RC3H1Q5TC82 AL512310.8-201ENST00000550183 120 ntBASIC2.08□□□□□ -2.08
RC3H1Q5TC82 MIR4804-201ENST00000581683 73 ntBASIC2.08□□□□□ -2.08
RC3H1Q5TC82 MIR548O2-201ENST00000616090 70 ntBASIC2.08□□□□□ -2.08
RC3H1Q5TC82 RNU6-369P-201ENST00000362515 102 ntBASIC2.07□□□□□ -2.08
RC3H1Q5TC82 SNORD115-24-201ENST00000363528 82 ntBASIC2.07□□□□□ -2.08
RC3H1Q5TC82 RNU1-42P-201ENST00000364033 160 ntBASIC2.07□□□□□ -2.08
RC3H1Q5TC82 RNU6-1335P-201ENST00000365426 107 ntBASIC2.07□□□□□ -2.08
RC3H1Q5TC82 MIR617-201ENST00000385030 97 ntBASIC2.07□□□□□ -2.08
RC3H1Q5TC82 SCARNA21.1-201ENST00000515996 128 ntBASIC2.07□□□□□ -2.08
RC3H1Q5TC82 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
RC3H1Q5TC82 MIR3657-201ENST00000584818 117 ntBASIC2.07□□□□□ -2.08
RC3H1Q5TC82 Y_RNA.32-201ENST00000362589 110 ntBASIC2.06□□□□□ -2.08
RC3H1Q5TC82 RNU7-56P-201ENST00000458744 62 ntBASIC2.06□□□□□ -2.08
RC3H1Q5TC82 SNORA31.14-201ENST00000516728 116 ntBASIC2.06□□□□□ -2.08
RC3H1Q5TC82 RNU7-161P-201ENST00000517289 62 ntBASIC2.06□□□□□ -2.08
RC3H1Q5TC82 uc_338.16-201ENST00000621804 95 ntBASIC2.06□□□□□ -2.08
RC3H1Q5TC82 RNU6-260P-201ENST00000384092 107 ntBASIC2.05□□□□□ -2.08
RC3H1Q5TC82 MIR30A-201ENST00000385092 71 ntBASIC2.05□□□□□ -2.08
RC3H1Q5TC82 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RC3H1Q5TC82 RNU1-119P-201ENST00000391122 165 ntBASIC2.05□□□□□ -2.08
RC3H1Q5TC82 AC067940.1-201ENST00000458411 300 ntBASIC2.05□□□□□ -2.08
RC3H1Q5TC82 MIR6504-201ENST00000613520 61 ntBASIC2.05□□□□□ -2.08
RC3H1Q5TC82 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
RC3H1Q5TC82 Y_RNA.174-201ENST00000363781 105 ntBASIC2.04□□□□□ -2.08
RC3H1Q5TC82 Y_RNA.363-201ENST00000365529 113 ntBASIC2.04□□□□□ -2.08
RC3H1Q5TC82 RNU6-54P-201ENST00000365563 107 ntBASIC2.04□□□□□ -2.08
RC3H1Q5TC82 MIR489-201ENST00000384923 84 ntBASIC2.04□□□□□ -2.08
RC3H1Q5TC82 AC008834.1-201ENST00000511612 175 ntBASIC2.04□□□□□ -2.08
RC3H1Q5TC82 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RC3H1Q5TC82 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RC3H1Q5TC82 MIR7-2-201ENST00000384970 110 ntBASIC2.03□□□□□ -2.08
RC3H1Q5TC82 MIR519E-201ENST00000385075 84 ntBASIC2.03□□□□□ -2.08
RC3H1Q5TC82 AL591704.2-201ENST00000421658 181 ntBASIC2.03□□□□□ -2.08
RC3H1Q5TC82 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.03□□□□□ -2.08
RC3H1Q5TC82 SNORA31.2-201ENST00000516019 134 ntBASIC2.03□□□□□ -2.08
RC3H1Q5TC82 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.03□□□□□ -2.08
RC3H1Q5TC82 RNU6-446P-201ENST00000362827 106 ntBASIC2.02□□□□□ -2.09
RC3H1Q5TC82 SNORA7.1-201ENST00000363750 139 ntBASIC2.02□□□□□ -2.09
RC3H1Q5TC82 SNORD48-201ENST00000364953 64 ntBASIC2.02□□□□□ -2.09
RC3H1Q5TC82 MIR517C-201ENST00000385103 95 ntBASIC2.02□□□□□ -2.09
RC3H1Q5TC82 SNORA67.6-201ENST00000391093 99 ntBASIC2.02□□□□□ -2.09
RC3H1Q5TC82 RNA5SP299-201ENST00000391203 116 ntBASIC2.02□□□□□ -2.09
RC3H1Q5TC82 SUMO2P12-201ENST00000405924 140 ntBASIC2.02□□□□□ -2.09
RC3H1Q5TC82 RNU7-21P-201ENST00000459430 62 ntBASIC2.02□□□□□ -2.09
RC3H1Q5TC82 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RC3H1Q5TC82 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms