Protein–RNA interactions for Protein: Q15858

SCN9A, Sodium channel protein type 9 subunit alpha, humanhuman

Predictions only

Length 1,988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9AQ15858 YWHAEP3-201ENST00000582767 121 ntBASIC-1.09□□□□□ -2.58
SCN9AQ15858 AC138207.3-201ENST00000585289 166 ntBASIC-1.09□□□□□ -2.58
SCN9AQ15858 MIR6773-201ENST00000612812 74 ntBASIC-1.09□□□□□ -2.58
SCN9AQ15858 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.1□□□□□ -2.59
SCN9AQ15858 RNU6-312P-201ENST00000364629 107 ntBASIC-1.1□□□□□ -2.59
SCN9AQ15858 MIR601-201ENST00000385256 79 ntBASIC-1.1□□□□□ -2.59
SCN9AQ15858 RNU7-6P-201ENST00000516845 62 ntBASIC-1.1□□□□□ -2.59
SCN9AQ15858 MIR5704-201ENST00000584029 77 ntBASIC-1.1□□□□□ -2.59
SCN9AQ15858 RNU6-639P-201ENST00000384074 107 ntBASIC-1.1□□□□□ -2.59
SCN9AQ15858 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.1□□□□□ -2.59
SCN9AQ15858 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.1□□□□□ -2.59
SCN9AQ15858 SNORD58.1-201ENST00000391313 66 ntBASIC-1.1□□□□□ -2.59
SCN9AQ15858 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.1□□□□□ -2.59
SCN9AQ15858 RNU6-238P-201ENST00000363313 106 ntBASIC-1.11□□□□□ -2.59
SCN9AQ15858 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.11□□□□□ -2.59
SCN9AQ15858 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.11□□□□□ -2.59
SCN9AQ15858 RNU6-75P-201ENST00000515944 104 ntBASIC-1.11□□□□□ -2.59
SCN9AQ15858 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.11□□□□□ -2.59
SCN9AQ15858 AC140658.3-201ENST00000567603 271 ntBASIC-1.11□□□□□ -2.59
SCN9AQ15858 MIR8062-201ENST00000621515 85 ntBASIC-1.11□□□□□ -2.59
SCN9AQ15858 MIR548G-201ENST00000408442 89 ntBASIC-1.12□□□□□ -2.59
SCN9AQ15858 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.12□□□□□ -2.59
SCN9AQ15858 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.12□□□□□ -2.59
SCN9AQ15858 RNU6-495P-201ENST00000362995 107 ntBASIC-1.12□□□□□ -2.59
SCN9AQ15858 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.12□□□□□ -2.59
SCN9AQ15858 AC097510.1-201ENST00000510945 133 ntBASIC-1.12□□□□□ -2.59
SCN9AQ15858 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.12□□□□□ -2.59
SCN9AQ15858 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.13□□□□□ -2.59
SCN9AQ15858 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.13□□□□□ -2.59
SCN9AQ15858 RNU6-337P-201ENST00000391243 106 ntBASIC-1.13□□□□□ -2.59
SCN9AQ15858 MIR548H3-201ENST00000408771 118 ntBASIC-1.13□□□□□ -2.59
SCN9AQ15858 RNU7-24P-201ENST00000458867 62 ntBASIC-1.13□□□□□ -2.59
SCN9AQ15858 SNORD127-201ENST00000458892 86 ntBASIC-1.13□□□□□ -2.59
SCN9AQ15858 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 SNORD64-201ENST00000386683 67 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 RNU6-239P-201ENST00000390990 99 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 SNORD115-23-201ENST00000364461 82 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 RNU6-54P-201ENST00000365563 107 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 RNU6-918P-201ENST00000391219 106 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 MTND2P23-201ENST00000422990 651 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 AC020661.2-201ENST00000560114 134 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 AC130289.1-201ENST00000577321 73 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 MIR4801-201ENST00000582704 82 ntBASIC-1.14□□□□□ -2.59
SCN9AQ15858 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.15□□□□□ -2.59
SCN9AQ15858 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.15□□□□□ -2.59
SCN9AQ15858 RNU6-409P-201ENST00000384114 104 ntBASIC-1.15□□□□□ -2.59
SCN9AQ15858 RNU6-65P-201ENST00000516332 98 ntBASIC-1.15□□□□□ -2.59
SCN9AQ15858 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.15□□□□□ -2.59
SCN9AQ15858 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.16□□□□□ -2.59
SCN9AQ15858 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.16□□□□□ -2.59
SCN9AQ15858 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.16□□□□□ -2.59
SCN9AQ15858 RNA5SP136-201ENST00000410906 107 ntBASIC-1.16□□□□□ -2.59
SCN9AQ15858 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.16□□□□□ -2.59
SCN9AQ15858 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.16□□□□□ -2.6
SCN9AQ15858 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.16□□□□□ -2.6
SCN9AQ15858 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.16□□□□□ -2.6
SCN9AQ15858 MIR1468-201ENST00000410600 86 ntBASIC-1.16□□□□□ -2.6
SCN9AQ15858 RNU6-647P-201ENST00000364243 107 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 SNORA62.4-201ENST00000365504 151 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 RNU6-431P-201ENST00000383874 107 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 MIR587-201ENST00000384845 96 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 RNA5SP470-201ENST00000516463 106 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 AC026421.1-201ENST00000519101 163 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 MIR4324-201ENST00000584846 72 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 MIR198-201ENST00000637333 62 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 RNU4-32P-201ENST00000363404 141 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 MIR4723-201ENST00000585070 81 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 MIR382-201ENST00000637119 76 ntBASIC-1.17□□□□□ -2.6
SCN9AQ15858 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.18□□□□□ -2.6
SCN9AQ15858 RNU2-38P-201ENST00000410856 79 ntBASIC-1.18□□□□□ -2.6
SCN9AQ15858 SNX3P1X-201ENST00000414887 175 ntBASIC-1.18□□□□□ -2.6
SCN9AQ15858 SCARNA18B-201ENST00000458806 135 ntBASIC-1.18□□□□□ -2.6
SCN9AQ15858 snoU83B.1-201ENST00000517136 88 ntBASIC-1.18□□□□□ -2.6
SCN9AQ15858 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 MIR582-201ENST00000365731 98 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 MTATP6P29-201ENST00000415057 132 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 RNU6-762P-201ENST00000517107 102 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 SNORA63.2-201ENST00000362603 126 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 MIR577-201ENST00000385196 96 ntBASIC-1.19□□□□□ -2.6
SCN9AQ15858 RNU6-832P-201ENST00000363319 107 ntBASIC-1.2□□□□□ -2.6
SCN9AQ15858 SNORD50.2-201ENST00000365465 70 ntBASIC-1.2□□□□□ -2.6
SCN9AQ15858 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.2□□□□□ -2.6
SCN9AQ15858 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.2□□□□□ -2.6
SCN9AQ15858 MIR548D2-201ENST00000384955 97 ntBASIC-1.2□□□□□ -2.6
SCN9AQ15858 MIR548U-201ENST00000390728 81 ntBASIC-1.2□□□□□ -2.6
SCN9AQ15858 RNU6-592P-201ENST00000411333 103 ntBASIC-1.2□□□□□ -2.6
SCN9AQ15858 MIR124-2-201ENST00000385081 109 ntBASIC-1.21□□□□□ -2.6
SCN9AQ15858 RNU7-121P-201ENST00000516604 62 ntBASIC-1.21□□□□□ -2.6
SCN9AQ15858 uc_338.19-201ENST00000616808 99 ntBASIC-1.21□□□□□ -2.6
SCN9AQ15858 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms