Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 Y_RNA.290-201ENST00000364879 114 ntBASIC0.42□□□□□ -2.34
CDH12P55289 SNORD115-44-201ENST00000365391 82 ntBASIC0.42□□□□□ -2.34
CDH12P55289 RNU6-905P-201ENST00000384434 107 ntBASIC0.42□□□□□ -2.34
CDH12P55289 Y_RNA.596-201ENST00000410462 109 ntBASIC0.42□□□□□ -2.34
CDH12P55289 RNU2-59P-201ENST00000410482 191 ntBASIC0.42□□□□□ -2.34
CDH12P55289 RNU6-287P-201ENST00000516230 98 ntBASIC0.42□□□□□ -2.34
CDH12P55289 SNORA40.13-201ENST00000516379 120 ntBASIC0.42□□□□□ -2.34
CDH12P55289 RNU1-29P-201ENST00000606574 126 ntBASIC0.42□□□□□ -2.34
CDH12P55289 MIR103A1-201ENST00000362165 78 ntBASIC0.41□□□□□ -2.34
CDH12P55289 RNU6-42P-201ENST00000384165 107 ntBASIC0.41□□□□□ -2.34
CDH12P55289 MIR6755-201ENST00000619993 66 ntBASIC0.41□□□□□ -2.34
CDH12P55289 MIR2052-201ENST00000636055 55 ntBASIC0.41□□□□□ -2.34
CDH12P55289 SNORD116-10-201ENST00000363791 102 ntBASIC0.4□□□□□ -2.35
CDH12P55289 Y_RNA.190-201ENST00000363964 101 ntBASIC0.4□□□□□ -2.35
CDH12P55289 Y_RNA.207-201ENST00000364142 106 ntBASIC0.4□□□□□ -2.35
CDH12P55289 RNA5SP89-201ENST00000410300 108 ntBASIC0.4□□□□□ -2.35
CDH12P55289 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
CDH12P55289 MIR2113-201ENST00000459007 91 ntBASIC0.4□□□□□ -2.35
CDH12P55289 SNORD4B-201ENST00000459083 72 ntBASIC0.4□□□□□ -2.35
CDH12P55289 RNU6-168P-201ENST00000516189 101 ntBASIC0.4□□□□□ -2.35
CDH12P55289 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
CDH12P55289 MIR4696-201ENST00000581431 70 ntBASIC0.4□□□□□ -2.35
CDH12P55289 MIR4536-1-201ENST00000583537 88 ntBASIC0.4□□□□□ -2.35
CDH12P55289 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
CDH12P55289 RNU6-664P-201ENST00000362381 107 ntBASIC0.39□□□□□ -2.35
CDH12P55289 SNORD101-201ENST00000384027 73 ntBASIC0.39□□□□□ -2.35
CDH12P55289 MIR519E-201ENST00000385075 84 ntBASIC0.39□□□□□ -2.35
CDH12P55289 RNU6-65P-201ENST00000516332 98 ntBASIC0.39□□□□□ -2.35
CDH12P55289 Y_RNA.677-201ENST00000516401 85 ntBASIC0.39□□□□□ -2.35
CDH12P55289 Y_RNA.423-201ENST00000384057 113 ntBASIC0.38□□□□□ -2.35
CDH12P55289 MIR617-201ENST00000385030 97 ntBASIC0.38□□□□□ -2.35
CDH12P55289 MIR518E-201ENST00000385252 88 ntBASIC0.38□□□□□ -2.35
CDH12P55289 RNU6-519P-201ENST00000410590 108 ntBASIC0.38□□□□□ -2.35
CDH12P55289 AC026421.1-201ENST00000519101 163 ntBASIC0.38□□□□□ -2.35
CDH12P55289 SNORA70.25-201ENST00000612741 95 ntBASIC0.38□□□□□ -2.35
CDH12P55289 MIRLET7F1-201ENST00000362202 87 ntBASIC0.37□□□□□ -2.35
CDH12P55289 MIR488-201ENST00000365739 83 ntBASIC0.37□□□□□ -2.35
CDH12P55289 RNU6-132P-201ENST00000383863 107 ntBASIC0.37□□□□□ -2.35
CDH12P55289 RNA5SP484-201ENST00000458857 111 ntBASIC0.37□□□□□ -2.35
CDH12P55289 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.37□□□□□ -2.35
CDH12P55289 MALAT1.1-201ENST00000618249 95 ntBASIC0.37□□□□□ -2.35
CDH12P55289 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
CDH12P55289 MIR216A-201ENST00000385063 110 ntBASIC0.36□□□□□ -2.35
CDH12P55289 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.36□□□□□ -2.35
CDH12P55289 Y_RNA.609-201ENST00000410669 89 ntBASIC0.36□□□□□ -2.35
CDH12P55289 RNU7-74P-201ENST00000459104 62 ntBASIC0.36□□□□□ -2.35
CDH12P55289 RNU6-863P-201ENST00000515989 104 ntBASIC0.36□□□□□ -2.35
CDH12P55289 RNU6-509P-201ENST00000363519 107 ntBASIC0.35□□□□□ -2.35
CDH12P55289 AC093423.1-201ENST00000440817 142 ntBASIC0.35□□□□□ -2.35
CDH12P55289 RNU6-1232P-201ENST00000516299 86 ntBASIC0.35□□□□□ -2.35
CDH12P55289 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.35□□□□□ -2.35
CDH12P55289 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
CDH12P55289 RNU1-141P-201ENST00000364623 158 ntBASIC0.34□□□□□ -2.36
CDH12P55289 NAMPTP3-201ENST00000569273 224 ntBASIC0.34□□□□□ -2.36
CDH12P55289 MIR3064-201ENST00000581130 66 ntBASIC0.34□□□□□ -2.36
CDH12P55289 MIR6513-201ENST00000621188 64 ntBASIC0.34□□□□□ -2.36
CDH12P55289 AC073869.9-201ENST00000641610 120 ntBASIC0.34□□□□□ -2.36
CDH12P55289 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
CDH12P55289 Y_RNA.239-201ENST00000364444 113 ntBASIC0.33□□□□□ -2.36
CDH12P55289 SNORA2A-201ENST00000383885 135 ntBASIC0.33□□□□□ -2.36
CDH12P55289 RNU6-935P-201ENST00000410371 100 ntBASIC0.33□□□□□ -2.36
CDH12P55289 snoU13.18-201ENST00000459483 104 ntBASIC0.33□□□□□ -2.36
CDH12P55289 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CDH12P55289 RNU6-815P-201ENST00000384080 113 ntBASIC0.32□□□□□ -2.36
CDH12P55289 Y_RNA.508-201ENST00000384502 114 ntBASIC0.32□□□□□ -2.36
CDH12P55289 MIR760-201ENST00000390220 80 ntBASIC0.32□□□□□ -2.36
CDH12P55289 RNU6-848P-201ENST00000515948 107 ntBASIC0.32□□□□□ -2.36
CDH12P55289 RNU6-617P-201ENST00000516147 107 ntBASIC0.32□□□□□ -2.36
CDH12P55289 RNU6-473P-201ENST00000516164 107 ntBASIC0.32□□□□□ -2.36
CDH12P55289 RNU6-1049P-201ENST00000516414 107 ntBASIC0.32□□□□□ -2.36
CDH12P55289 AC104996.3-201ENST00000590718 94 ntBASIC0.32□□□□□ -2.36
CDH12P55289 MIR6515-201ENST00000619843 57 ntBASIC0.32□□□□□ -2.36
CDH12P55289 RNA5SP62-201ENST00000363457 110 ntBASIC0.31□□□□□ -2.36
CDH12P55289 RNU6-811P-201ENST00000384069 107 ntBASIC0.31□□□□□ -2.36
CDH12P55289 RNY1P7-201ENST00000384743 110 ntBASIC0.31□□□□□ -2.36
CDH12P55289 RNA5SP292-201ENST00000390974 118 ntBASIC0.31□□□□□ -2.36
CDH12P55289 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CDH12P55289 AC108740.1-201ENST00000498629 225 ntBASIC0.31□□□□□ -2.36
CDH12P55289 RNU4-32P-201ENST00000363404 141 ntBASIC0.3□□□□□ -2.36
CDH12P55289 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
CDH12P55289 MIR451A-201ENST00000385059 72 ntBASIC0.3□□□□□ -2.36
CDH12P55289 MIR548U-201ENST00000390728 81 ntBASIC0.3□□□□□ -2.36
CDH12P55289 SNORD110-201ENST00000408189 75 ntBASIC0.3□□□□□ -2.36
CDH12P55289 AC006210.1-201ENST00000424882 111 ntBASIC0.3□□□□□ -2.36
CDH12P55289 AC073261.1-201ENST00000429409 121 ntBASIC0.3□□□□□ -2.36
CDH12P55289 MIR5706-201ENST00000579841 80 ntBASIC0.3□□□□□ -2.36
CDH12P55289 AC243829.6-201ENST00000612652 106 ntBASIC0.3□□□□□ -2.36
CDH12P55289 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.3□□□□□ -2.36
CDH12P55289 RNU6-1057P-201ENST00000517162 102 ntBASIC0.29□□□□□ -2.36
CDH12P55289 AC022709.1-201ENST00000615967 87 ntBASIC0.29□□□□□ -2.36
CDH12P55289 RNU6-1131P-201ENST00000364955 107 ntBASIC0.28□□□□□ -2.36
CDH12P55289 RNA5SP128-201ENST00000365305 116 ntBASIC0.28□□□□□ -2.36
CDH12P55289 Y_RNA.491-201ENST00000384417 107 ntBASIC0.28□□□□□ -2.36
CDH12P55289 AC069113.3-201ENST00000521019 150 ntBASIC0.28□□□□□ -2.36
CDH12P55289 MIR4460-201ENST00000577862 86 ntBASIC0.28□□□□□ -2.36
CDH12P55289 Y_RNA.220-201ENST00000364244 109 ntBASIC0.27□□□□□ -2.37
CDH12P55289 RNU6-49P-201ENST00000384256 107 ntBASIC0.27□□□□□ -2.37
CDH12P55289 RNY1P4-201ENST00000384595 115 ntBASIC0.27□□□□□ -2.37
CDH12P55289 MT-TY-201ENST00000387409 66 ntBASIC0.27□□□□□ -2.37
CDH12P55289 MIR501-201ENST00000390204 84 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 247.2 ms