Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.53□□□□□ -2.49
SHMT2P34897 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.53□□□□□ -2.49
SHMT2P34897 RPS29P8-201ENST00000445109 171 ntBASIC-0.53□□□□□ -2.49
SHMT2P34897 AC097510.1-201ENST00000510945 133 ntBASIC-0.53□□□□□ -2.49
SHMT2P34897 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.53□□□□□ -2.49
SHMT2P34897 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU6-900P-201ENST00000384498 102 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU6-394P-201ENST00000410735 107 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU7-55P-201ENST00000459426 62 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU6-781P-201ENST00000516377 101 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 AP000676.1-201ENST00000533307 52 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 MIR4696-201ENST00000581431 70 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU6-90P-201ENST00000606352 106 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 AC004792.1-201ENST00000614523 137 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 MIR548O2-201ENST00000616090 70 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 AC099654.10-201ENST00000640395 161 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 MIR20A-201ENST00000362279 71 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 SNORD114-14-201ENST00000362723 75 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 MT-TG-201ENST00000387429 68 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 AC244090.1-201ENST00000441884 93 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 AL158147.1-201ENST00000443970 75 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 snoU13.13-201ENST00000458842 104 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.55□□□□□ -2.5
SHMT2P34897 MIR548X2-201ENST00000579776 100 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 RNU6-86P-201ENST00000606534 107 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 RNU6-409P-201ENST00000384114 104 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 SNORA3B-201ENST00000391305 131 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 AL445193.1-201ENST00000441183 141 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 SNORD38.3-201ENST00000516599 73 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 U7.2-201ENST00000607576 63 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 AC093726.3-201ENST00000637588 150 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 MIR548E-201ENST00000408287 88 ntBASIC-0.57□□□□□ -2.5
SHMT2P34897 SNORD75.1-201ENST00000408373 60 ntBASIC-0.57□□□□□ -2.5
SHMT2P34897 snoU13.11-201ENST00000459219 104 ntBASIC-0.57□□□□□ -2.5
SHMT2P34897 MIR6851-201ENST00000617060 67 ntBASIC-0.57□□□□□ -2.5
SHMT2P34897 RNU6-664P-201ENST00000362381 107 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 RNU6-54P-201ENST00000365563 107 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 RNU6-804P-201ENST00000384286 107 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 RNU6-476P-201ENST00000384726 107 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 MIR569-201ENST00000385228 96 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 RNU6-466P-201ENST00000391224 103 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 SNORD42B-201ENST00000458893 67 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 RNU6-75P-201ENST00000515944 104 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 SNORD115-25-201ENST00000362619 82 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 SNORD101-201ENST00000384027 73 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 RNA5SP451-201ENST00000410588 110 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 AL442128.1-201ENST00000615151 90 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 RNU6-721P-201ENST00000410155 105 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 MIR1912-201ENST00000410389 80 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 MIR3144-201ENST00000579460 79 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 MIR5704-201ENST00000584029 77 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 AP001180.6-201ENST00000584918 159 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 MIR8068-201ENST00000618032 68 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 RNU6-502P-201ENST00000362419 108 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 RNY4P6-201ENST00000363667 96 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 RNU6-816P-201ENST00000390914 107 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 RNU6-762P-201ENST00000517107 102 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 MIR5589-201ENST00000579442 60 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 SNORD58C-201ENST00000365223 64 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 MIR3681-201ENST00000580089 72 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 MIR4802-201ENST00000581881 80 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 AC025166.1-201ENST00000612411 163 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.63□□□□□ -2.51
SHMT2P34897 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.63□□□□□ -2.51
SHMT2P34897 MIR216B-201ENST00000390186 82 ntBASIC-0.63□□□□□ -2.51
SHMT2P34897 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
SHMT2P34897 RNU6-935P-201ENST00000410371 100 ntBASIC-0.63□□□□□ -2.51
SHMT2P34897 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.63□□□□□ -2.51
SHMT2P34897 RNU6-973P-201ENST00000364690 107 ntBASIC-0.64□□□□□ -2.51
SHMT2P34897 RNU6-901P-201ENST00000384593 106 ntBASIC-0.64□□□□□ -2.51
SHMT2P34897 MTND5P18-201ENST00000445624 1801 ntBASIC-0.64□□□□□ -2.51
SHMT2P34897 MIR101-1-201ENST00000362265 75 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 MIR451A-201ENST00000385059 72 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 RNU6-337P-201ENST00000391243 106 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 RNA5SP272-201ENST00000516095 111 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 AC025521.1-201ENST00000621624 286 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.66□□□□□ -2.52
SHMT2P34897 MIR204-201ENST00000385200 110 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms