Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 Y_RNA.290-201ENST00000364879 114 ntBASIC0.62□□□□□ -2.31
CIITAP33076 MIR488-201ENST00000365739 83 ntBASIC0.62□□□□□ -2.31
CIITAP33076 RNU6-972P-201ENST00000391208 107 ntBASIC0.62□□□□□ -2.31
CIITAP33076 RNU7-85P-201ENST00000458851 63 ntBASIC0.62□□□□□ -2.31
CIITAP33076 RNU6-75P-201ENST00000515944 104 ntBASIC0.62□□□□□ -2.31
CIITAP33076 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.62□□□□□ -2.31
CIITAP33076 Y_RNA.190-201ENST00000363964 101 ntBASIC0.61□□□□□ -2.31
CIITAP33076 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
CIITAP33076 Y_RNA.648-201ENST00000459455 110 ntBASIC0.61□□□□□ -2.31
CIITAP33076 RNU6-162P-201ENST00000516228 103 ntBASIC0.61□□□□□ -2.31
CIITAP33076 SNORA40.13-201ENST00000516379 120 ntBASIC0.61□□□□□ -2.31
CIITAP33076 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CIITAP33076 RNA5SP62-201ENST00000363457 110 ntBASIC0.6□□□□□ -2.31
CIITAP33076 RNU6-726P-201ENST00000364680 107 ntBASIC0.6□□□□□ -2.31
CIITAP33076 Y_RNA.677-201ENST00000516401 85 ntBASIC0.6□□□□□ -2.31
CIITAP33076 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
CIITAP33076 RNA5SP395-201ENST00000516567 118 ntBASIC0.6□□□□□ -2.31
CIITAP33076 U6.100-201ENST00000636230 99 ntBASIC0.6□□□□□ -2.31
CIITAP33076 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
CIITAP33076 Y_RNA.283-201ENST00000364798 112 ntBASIC0.59□□□□□ -2.31
CIITAP33076 SNORA8.2-201ENST00000384372 139 ntBASIC0.59□□□□□ -2.31
CIITAP33076 RNU7-104P-201ENST00000459398 79 ntBASIC0.59□□□□□ -2.31
CIITAP33076 RNA5SP268-201ENST00000516828 124 ntBASIC0.59□□□□□ -2.31
CIITAP33076 MIR4711-201ENST00000578274 70 ntBASIC0.59□□□□□ -2.31
CIITAP33076 MIR3920-201ENST00000581751 86 ntBASIC0.59□□□□□ -2.31
CIITAP33076 MTRNR2L2-201ENST00000604882 87 ntBASIC0.59□□□□□ -2.31
CIITAP33076 MIR7107-201ENST00000611489 80 ntBASIC0.59□□□□□ -2.31
CIITAP33076 TRDV1-202ENST00000621643 102 ntBASIC0.59□□□□□ -2.31
CIITAP33076 MIR2052-201ENST00000636055 55 ntBASIC0.59□□□□□ -2.31
CIITAP33076 SNORD118-201ENST00000363593 134 ntBASIC0.58□□□□□ -2.32
CIITAP33076 RNU6-1229P-201ENST00000364295 107 ntBASIC0.58□□□□□ -2.32
CIITAP33076 SNORD41.1-201ENST00000391000 69 ntBASIC0.58□□□□□ -2.32
CIITAP33076 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
CIITAP33076 AC243829.3-201ENST00000622177 108 ntBASIC0.58□□□□□ -2.32
CIITAP33076 Y_RNA.96-201ENST00000363092 109 ntBASIC0.57□□□□□ -2.32
CIITAP33076 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
CIITAP33076 AC098934.3-201ENST00000430450 190 ntBASIC0.57□□□□□ -2.32
CIITAP33076 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.57□□□□□ -2.32
CIITAP33076 RN7SKP12-201ENST00000516275 143 ntBASIC0.57□□□□□ -2.32
CIITAP33076 MIR548AG2-201ENST00000581228 64 ntBASIC0.57□□□□□ -2.32
CIITAP33076 SNORA25.18-201ENST00000607153 114 ntBASIC0.57□□□□□ -2.32
CIITAP33076 MALAT1.1-201ENST00000618249 95 ntBASIC0.57□□□□□ -2.32
CIITAP33076 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
CIITAP33076 AC092634.7-201ENST00000621022 103 ntBASIC0.57□□□□□ -2.32
CIITAP33076 SNORD116-10-201ENST00000363791 102 ntBASIC0.56□□□□□ -2.32
CIITAP33076 Y_RNA.258-201ENST00000364613 105 ntBASIC0.56□□□□□ -2.32
CIITAP33076 SNORD4B-201ENST00000459083 72 ntBASIC0.56□□□□□ -2.32
CIITAP33076 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.56□□□□□ -2.32
CIITAP33076 AC067863.3-201ENST00000624172 122 ntBASIC0.56□□□□□ -2.32
CIITAP33076 RNA5SP193-201ENST00000410353 107 ntBASIC0.55□□□□□ -2.32
CIITAP33076 RNU6-1126P-201ENST00000384002 107 ntBASIC0.54□□□□□ -2.32
CIITAP33076 MIR518A1-201ENST00000385068 85 ntBASIC0.54□□□□□ -2.32
CIITAP33076 RNU6-466P-201ENST00000391224 103 ntBASIC0.54□□□□□ -2.32
CIITAP33076 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
CIITAP33076 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
CIITAP33076 RNA5SP227-201ENST00000516184 113 ntBASIC0.54□□□□□ -2.32
CIITAP33076 RNU6-229P-201ENST00000516614 102 ntBASIC0.54□□□□□ -2.32
CIITAP33076 SNORA62.5-201ENST00000516634 120 ntBASIC0.54□□□□□ -2.32
CIITAP33076 AC026421.1-201ENST00000519101 163 ntBASIC0.54□□□□□ -2.32
CIITAP33076 MIR4696-201ENST00000581431 70 ntBASIC0.54□□□□□ -2.32
CIITAP33076 AL162376.1-201ENST00000624117 175 ntBASIC0.54□□□□□ -2.32
CIITAP33076 RNU6-49P-201ENST00000384256 107 ntBASIC0.53□□□□□ -2.32
CIITAP33076 RNY1P7-201ENST00000384743 110 ntBASIC0.53□□□□□ -2.32
CIITAP33076 RNU6-287P-201ENST00000516230 98 ntBASIC0.53□□□□□ -2.32
CIITAP33076 RNU7-13P-201ENST00000516413 62 ntBASIC0.53□□□□□ -2.32
CIITAP33076 RNU1-29P-201ENST00000606574 126 ntBASIC0.53□□□□□ -2.32
CIITAP33076 RNU6-1298P-201ENST00000362456 101 ntBASIC0.52□□□□□ -2.33
CIITAP33076 Y_RNA.207-201ENST00000364142 106 ntBASIC0.52□□□□□ -2.33
CIITAP33076 RNU6-132P-201ENST00000383863 107 ntBASIC0.52□□□□□ -2.33
CIITAP33076 RNU6-269P-201ENST00000391077 97 ntBASIC0.52□□□□□ -2.33
CIITAP33076 Y_RNA.596-201ENST00000410462 109 ntBASIC0.52□□□□□ -2.33
CIITAP33076 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
CIITAP33076 AC069271.1-201ENST00000445577 156 ntBASIC0.52□□□□□ -2.33
CIITAP33076 RNU6-664P-201ENST00000362381 107 ntBASIC0.51□□□□□ -2.33
CIITAP33076 Y_RNA.609-201ENST00000410669 89 ntBASIC0.51□□□□□ -2.33
CIITAP33076 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
CIITAP33076 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
CIITAP33076 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.51□□□□□ -2.33
CIITAP33076 MIR4536-1-201ENST00000583537 88 ntBASIC0.51□□□□□ -2.33
CIITAP33076 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
CIITAP33076 MIR1197-201ENST00000408818 88 ntBASIC0.5□□□□□ -2.33
CIITAP33076 RNU6-519P-201ENST00000410590 108 ntBASIC0.5□□□□□ -2.33
CIITAP33076 MIR2113-201ENST00000459007 91 ntBASIC0.5□□□□□ -2.33
CIITAP33076 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
CIITAP33076 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.5□□□□□ -2.33
CIITAP33076 MIRLET7F1-201ENST00000362202 87 ntBASIC0.49□□□□□ -2.33
CIITAP33076 SNORD44.1-201ENST00000363202 61 ntBASIC0.49□□□□□ -2.33
CIITAP33076 RNU6-1131P-201ENST00000364955 107 ntBASIC0.49□□□□□ -2.33
CIITAP33076 SNORD115-44-201ENST00000365391 82 ntBASIC0.49□□□□□ -2.33
CIITAP33076 SNORD101-201ENST00000384027 73 ntBASIC0.49□□□□□ -2.33
CIITAP33076 MIR519E-201ENST00000385075 84 ntBASIC0.49□□□□□ -2.33
CIITAP33076 AC093423.1-201ENST00000440817 142 ntBASIC0.49□□□□□ -2.33
CIITAP33076 RNU6-65P-201ENST00000516332 98 ntBASIC0.49□□□□□ -2.33
CIITAP33076 MIR4752-201ENST00000579672 72 ntBASIC0.49□□□□□ -2.33
CIITAP33076 Y_RNA.694-201ENST00000516677 117 ntBASIC0.48□□□□□ -2.33
CIITAP33076 MIR3064-201ENST00000581130 66 ntBASIC0.48□□□□□ -2.33
CIITAP33076 MIR6755-201ENST00000619993 66 ntBASIC0.48□□□□□ -2.33
CIITAP33076 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
CIITAP33076 MIR617-201ENST00000385030 97 ntBASIC0.47□□□□□ -2.33
CIITAP33076 RNA5SP292-201ENST00000390974 118 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms