Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 MIR216B-201ENST00000390186 82 ntBASIC-1.17□□□□□ -2.6
HOXA6P31267 MIR1255B2-201ENST00000408618 67 ntBASIC-1.17□□□□□ -2.6
HOXA6P31267 RNU4-61P-201ENST00000411243 107 ntBASIC-1.17□□□□□ -2.6
HOXA6P31267 SNORD127-201ENST00000458892 86 ntBASIC-1.17□□□□□ -2.6
HOXA6P31267 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.17□□□□□ -2.6
HOXA6P31267 RNU6-412P-201ENST00000516434 106 ntBASIC-1.17□□□□□ -2.6
HOXA6P31267 AP002795.1-201ENST00000534879 84 ntBASIC-1.17□□□□□ -2.6
HOXA6P31267 RNU6-90P-201ENST00000606352 106 ntBASIC-1.17□□□□□ -2.6
HOXA6P31267 AL137067.1-201ENST00000615933 120 ntBASIC-1.17□□□□□ -2.6
HOXA6P31267 RNA5SP26-201ENST00000362406 119 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 RNU6-495P-201ENST00000362995 107 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 MT-TW-201ENST00000387382 68 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 SNORA26.4-201ENST00000391188 123 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
HOXA6P31267 RPL35AP4-201ENST00000412007 102 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 HLA-S-202ENST00000425174 53 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.18□□□□□ -2.6
HOXA6P31267 RNU7-85P-201ENST00000458851 63 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 MIR4282-201ENST00000583613 67 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.18□□□□□ -2.6
HOXA6P31267 U6.106-201ENST00000636360 105 ntBASIC-1.18□□□□□ -2.6
HOXA6P31267 SNORA2.1-201ENST00000363089 137 ntBASIC-1.19□□□□□ -2.6
HOXA6P31267 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.19□□□□□ -2.6
HOXA6P31267 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.19□□□□□ -2.6
HOXA6P31267 RNU6-576P-201ENST00000390854 102 ntBASIC-1.19□□□□□ -2.6
HOXA6P31267 RNU6-101P-201ENST00000410323 104 ntBASIC-1.19□□□□□ -2.6
HOXA6P31267 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.19□□□□□ -2.6
HOXA6P31267 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.19□□□□□ -2.6
HOXA6P31267 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.19□□□□□ -2.6
HOXA6P31267 MIR3658-201ENST00000636291 56 ntBASIC-1.19□□□□□ -2.6
HOXA6P31267 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.2□□□□□ -2.6
HOXA6P31267 SNORD38.1-201ENST00000363863 68 ntBASIC-1.2□□□□□ -2.6
HOXA6P31267 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.2□□□□□ -2.6
HOXA6P31267 SNORA24B-201ENST00000384176 131 ntBASIC-1.2□□□□□ -2.6
HOXA6P31267 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.2□□□□□ -2.6
HOXA6P31267 MIR548H3-201ENST00000408771 118 ntBASIC-1.2□□□□□ -2.6
HOXA6P31267 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.2□□□□□ -2.6
HOXA6P31267 snoU13.17-201ENST00000458802 104 ntBASIC-1.2□□□□□ -2.6
HOXA6P31267 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.2□□□□□ -2.6
HOXA6P31267 MTND3P22-201ENST00000510932 243 ntBASIC-1.2□□□□□ -2.6
HOXA6P31267 AL160413.1-201ENST00000622780 310 ntBASIC-1.2□□□□□ -2.6
HOXA6P31267 RNU6-151P-201ENST00000364158 107 ntBASIC-1.21□□□□□ -2.6
HOXA6P31267 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.21□□□□□ -2.6
HOXA6P31267 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.21□□□□□ -2.6
HOXA6P31267 AC026407.1-201ENST00000518369 204 ntBASIC-1.21□□□□□ -2.6
HOXA6P31267 MIR548AG1-201ENST00000579932 66 ntBASIC-1.21□□□□□ -2.6
HOXA6P31267 MIR3149-201ENST00000584629 83 ntBASIC-1.21□□□□□ -2.6
HOXA6P31267 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.22□□□□□ -2.6
HOXA6P31267 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.22□□□□□ -2.6
HOXA6P31267 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.22□□□□□ -2.6
HOXA6P31267 RNU6-275P-201ENST00000364910 107 ntBASIC-1.22□□□□□ -2.6
HOXA6P31267 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.22□□□□□ -2.6
HOXA6P31267 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.22□□□□□ -2.6
HOXA6P31267 RNU7-88P-201ENST00000458752 63 ntBASIC-1.22□□□□□ -2.6
HOXA6P31267 AC026421.1-201ENST00000519101 163 ntBASIC-1.22□□□□□ -2.6
HOXA6P31267 MIR5591-201ENST00000578248 65 ntBASIC-1.22□□□□□ -2.6
HOXA6P31267 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.23□□□□□ -2.61
HOXA6P31267 RNU6-382P-201ENST00000365181 106 ntBASIC-1.23□□□□□ -2.61
HOXA6P31267 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.23□□□□□ -2.61
HOXA6P31267 MIR29B1-201ENST00000385015 81 ntBASIC-1.23□□□□□ -2.61
HOXA6P31267 U3.27-201ENST00000391237 200 ntBASIC-1.23□□□□□ -2.61
HOXA6P31267 MTATP6P21-201ENST00000440681 189 ntBASIC-1.23□□□□□ -2.61
HOXA6P31267 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.23□□□□□ -2.61
HOXA6P31267 RNU6-65P-201ENST00000516332 98 ntBASIC-1.23□□□□□ -2.61
HOXA6P31267 AC113195.1-201ENST00000579952 141 ntBASIC-1.23□□□□□ -2.61
HOXA6P31267 MIR3163-201ENST00000581592 73 ntBASIC-1.23□□□□□ -2.61
HOXA6P31267 SNORA63.2-201ENST00000362603 126 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 RNA5SP292-201ENST00000390974 118 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 SNORD75.2-201ENST00000408784 58 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 MIR4536-1-201ENST00000583537 88 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 AC139792.2-201ENST00000624218 587 ntBASIC-1.24□□□□□ -2.61
HOXA6P31267 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.25□□□□□ -2.61
HOXA6P31267 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.25□□□□□ -2.61
HOXA6P31267 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.25□□□□□ -2.61
HOXA6P31267 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.25□□□□□ -2.61
HOXA6P31267 MIR548A1-201ENST00000385041 97 ntBASIC-1.25□□□□□ -2.61
HOXA6P31267 SNORA75.5-201ENST00000391291 81 ntBASIC-1.25□□□□□ -2.61
HOXA6P31267 MIR3064-201ENST00000581130 66 ntBASIC-1.25□□□□□ -2.61
HOXA6P31267 SNORD115-33-201ENST00000363723 82 ntBASIC-1.26□□□□□ -2.61
HOXA6P31267 SNORD50.2-201ENST00000365465 70 ntBASIC-1.26□□□□□ -2.61
HOXA6P31267 RNA5SP461-201ENST00000516451 104 ntBASIC-1.26□□□□□ -2.61
HOXA6P31267 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.26□□□□□ -2.61
HOXA6P31267 CYP3A54P-201ENST00000566950 75 ntBASIC-1.26□□□□□ -2.61
HOXA6P31267 AL513043.2-201ENST00000573941 143 ntBASIC-1.26□□□□□ -2.61
HOXA6P31267 AL442128.1-201ENST00000615151 90 ntBASIC-1.26□□□□□ -2.61
HOXA6P31267 AC090971.5-201ENST00000621102 293 ntBASIC-1.26□□□□□ -2.61
HOXA6P31267 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.26□□□□□ -2.61
HOXA6P31267 RNU6-924P-201ENST00000362926 108 ntBASIC-1.27□□□□□ -2.61
HOXA6P31267 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 227 ms