Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.54□□□□□ -2.66
HLA-DMBP28068 MIR124-2-201ENST00000385081 109 ntBASIC-1.54□□□□□ -2.66
HLA-DMBP28068 RNU6-493P-201ENST00000391321 108 ntBASIC-1.54□□□□□ -2.66
HLA-DMBP28068 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.54□□□□□ -2.66
HLA-DMBP28068 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.54□□□□□ -2.66
HLA-DMBP28068 RNU6-875P-201ENST00000516488 106 ntBASIC-1.54□□□□□ -2.66
HLA-DMBP28068 RNU6-988P-201ENST00000519081 107 ntBASIC-1.54□□□□□ -2.66
HLA-DMBP28068 MIR3163-201ENST00000581592 73 ntBASIC-1.54□□□□□ -2.66
HLA-DMBP28068 RNU6-309P-201ENST00000364573 106 ntBASIC-1.55□□□□□ -2.66
HLA-DMBP28068 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.55□□□□□ -2.66
HLA-DMBP28068 MT-TI-201ENST00000387365 69 ntBASIC-1.55□□□□□ -2.66
HLA-DMBP28068 YWHAEP3-201ENST00000582767 121 ntBASIC-1.55□□□□□ -2.66
HLA-DMBP28068 MIR1255B1-201ENST00000636325 63 ntBASIC-1.55□□□□□ -2.66
HLA-DMBP28068 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.56□□□□□ -2.66
HLA-DMBP28068 SNORD18B-201ENST00000365659 72 ntBASIC-1.56□□□□□ -2.66
HLA-DMBP28068 MIR1207-201ENST00000408249 87 ntBASIC-1.56□□□□□ -2.66
HLA-DMBP28068 RBMX2P4-201ENST00000441256 376 ntBASIC-1.56□□□□□ -2.66
HLA-DMBP28068 AC026421.1-201ENST00000519101 163 ntBASIC-1.56□□□□□ -2.66
HLA-DMBP28068 AC108081.1-201ENST00000604358 221 ntBASIC-1.56□□□□□ -2.66
HLA-DMBP28068 RNU6-647P-201ENST00000364243 107 ntBASIC-1.57□□□□□ -2.66
HLA-DMBP28068 RNU7-134P-201ENST00000458997 64 ntBASIC-1.57□□□□□ -2.66
HLA-DMBP28068 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.57□□□□□ -2.66
HLA-DMBP28068 MIR4308-201ENST00000580634 81 ntBASIC-1.57□□□□□ -2.66
HLA-DMBP28068 U6.106-201ENST00000636360 105 ntBASIC-1.57□□□□□ -2.66
HLA-DMBP28068 AL512310.12-203ENST00000640543 90 ntBASIC-1.57□□□□□ -2.66
HLA-DMBP28068 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.58□□□□□ -2.66
HLA-DMBP28068 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.58□□□□□ -2.66
HLA-DMBP28068 RNY4P28-201ENST00000365281 93 ntBASIC-1.58□□□□□ -2.66
HLA-DMBP28068 RNU6-75P-201ENST00000515944 104 ntBASIC-1.58□□□□□ -2.66
HLA-DMBP28068 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.58□□□□□ -2.66
HLA-DMBP28068 MIR3646-201ENST00000578301 84 ntBASIC-1.58□□□□□ -2.66
HLA-DMBP28068 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.58□□□□□ -2.66
HLA-DMBP28068 MIR29B1-201ENST00000385015 81 ntBASIC-1.59□□□□□ -2.66
HLA-DMBP28068 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.59□□□□□ -2.66
HLA-DMBP28068 SNORA7.5-201ENST00000410672 110 ntBASIC-1.59□□□□□ -2.66
HLA-DMBP28068 RNU6-158P-201ENST00000517104 100 ntBASIC-1.59□□□□□ -2.66
HLA-DMBP28068 MIR4795-201ENST00000584182 89 ntBASIC-1.59□□□□□ -2.66
HLA-DMBP28068 MIR6844-201ENST00000637122 62 ntBASIC-1.59□□□□□ -2.66
HLA-DMBP28068 RNU6-208P-201ENST00000362431 107 ntBASIC-1.6□□□□□ -2.67
HLA-DMBP28068 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.6□□□□□ -2.67
HLA-DMBP28068 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.6□□□□□ -2.67
HLA-DMBP28068 RNU6-474P-201ENST00000384243 107 ntBASIC-1.6□□□□□ -2.67
HLA-DMBP28068 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.6□□□□□ -2.67
HLA-DMBP28068 MIR4464-201ENST00000580818 92 ntBASIC-1.6□□□□□ -2.67
HLA-DMBP28068 MIR4680-201ENST00000580906 66 ntBASIC-1.6□□□□□ -2.67
HLA-DMBP28068 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.6□□□□□ -2.67
HLA-DMBP28068 AC021753.1-201ENST00000635724 168 ntBASIC-1.6□□□□□ -2.67
HLA-DMBP28068 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.61□□□□□ -2.67
HLA-DMBP28068 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.61□□□□□ -2.67
HLA-DMBP28068 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.61□□□□□ -2.67
HLA-DMBP28068 AC107027.2-201ENST00000512197 115 ntBASIC-1.61□□□□□ -2.67
HLA-DMBP28068 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.62□□□□□ -2.67
HLA-DMBP28068 RNU6-363P-201ENST00000362895 105 ntBASIC-1.62□□□□□ -2.67
HLA-DMBP28068 RNU6-495P-201ENST00000362995 107 ntBASIC-1.62□□□□□ -2.67
HLA-DMBP28068 MIR527-201ENST00000385244 85 ntBASIC-1.62□□□□□ -2.67
HLA-DMBP28068 RNU6-576P-201ENST00000390854 102 ntBASIC-1.62□□□□□ -2.67
HLA-DMBP28068 MIR8485-201ENST00000401372 91 ntBASIC-1.62□□□□□ -2.67
HLA-DMBP28068 MIR5591-201ENST00000578248 65 ntBASIC-1.62□□□□□ -2.67
HLA-DMBP28068 MIR6818-201ENST00000621576 65 ntBASIC-1.62□□□□□ -2.67
HLA-DMBP28068 RNY4P6-201ENST00000363667 96 ntBASIC-1.63□□□□□ -2.67
HLA-DMBP28068 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.63□□□□□ -2.67
HLA-DMBP28068 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.63□□□□□ -2.67
HLA-DMBP28068 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.63□□□□□ -2.67
HLA-DMBP28068 AC068339.1-201ENST00000526965 141 ntBASIC-1.63□□□□□ -2.67
HLA-DMBP28068 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.64□□□□□ -2.67
HLA-DMBP28068 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.64□□□□□ -2.67
HLA-DMBP28068 RNY1P11-201ENST00000363759 113 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 RNU6-713P-201ENST00000384761 107 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 FGF7P7-201ENST00000514120 227 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 RNU6-719P-201ENST00000516671 104 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 AL353803.5-201ENST00000599815 141 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 AL445584.3-201ENST00000617173 78 ntBASIC-1.65□□□□□ -2.67
HLA-DMBP28068 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.66□□□□□ -2.68
HLA-DMBP28068 RNU6-226P-201ENST00000363778 107 ntBASIC-1.66□□□□□ -2.68
HLA-DMBP28068 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.66□□□□□ -2.68
HLA-DMBP28068 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.66□□□□□ -2.68
HLA-DMBP28068 MT-TW-201ENST00000387382 68 ntBASIC-1.66□□□□□ -2.68
HLA-DMBP28068 AC021146.9-201ENST00000512503 156 ntBASIC-1.66□□□□□ -2.68
HLA-DMBP28068 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.66□□□□□ -2.68
HLA-DMBP28068 U6.96-201ENST00000636425 70 ntBASIC-1.66□□□□□ -2.68
HLA-DMBP28068 U6.104-201ENST00000637979 90 ntBASIC-1.66□□□□□ -2.68
HLA-DMBP28068 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.67□□□□□ -2.68
HLA-DMBP28068 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.67□□□□□ -2.68
HLA-DMBP28068 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.67□□□□□ -2.68
HLA-DMBP28068 MIR889-201ENST00000401280 79 ntBASIC-1.67□□□□□ -2.68
HLA-DMBP28068 MIR4770-201ENST00000579149 58 ntBASIC-1.67□□□□□ -2.68
HLA-DMBP28068 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.67□□□□□ -2.68
HLA-DMBP28068 MIR6129-201ENST00000616087 109 ntBASIC-1.67□□□□□ -2.68
HLA-DMBP28068 MIR6888-201ENST00000621977 67 ntBASIC-1.67□□□□□ -2.68
HLA-DMBP28068 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.68□□□□□ -2.68
HLA-DMBP28068 SNORA63.2-201ENST00000362603 126 ntBASIC-1.68□□□□□ -2.68
HLA-DMBP28068 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.68□□□□□ -2.68
HLA-DMBP28068 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.68□□□□□ -2.68
HLA-DMBP28068 RNU6-990P-201ENST00000364385 104 ntBASIC-1.68□□□□□ -2.68
HLA-DMBP28068 MIR759-201ENST00000390224 91 ntBASIC-1.68□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms