Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.96□□□□□ -2.56
USF1P22415 SNORD101-201ENST00000384027 73 ntBASIC-0.96□□□□□ -2.56
USF1P22415 SNORD37.2-201ENST00000391075 66 ntBASIC-0.96□□□□□ -2.56
USF1P22415 SNORD2-201ENST00000459163 69 ntBASIC-0.96□□□□□ -2.56
USF1P22415 RNU4-71P-201ENST00000516258 113 ntBASIC-0.96□□□□□ -2.56
USF1P22415 MIR8068-201ENST00000618032 68 ntBASIC-0.96□□□□□ -2.56
USF1P22415 MIR1255B1-201ENST00000636325 63 ntBASIC-0.96□□□□□ -2.56
USF1P22415 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.97□□□□□ -2.56
USF1P22415 RNU6-54P-201ENST00000365563 107 ntBASIC-0.97□□□□□ -2.56
USF1P22415 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.97□□□□□ -2.56
USF1P22415 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.97□□□□□ -2.56
USF1P22415 MIR517B-201ENST00000385102 67 ntBASIC-0.97□□□□□ -2.56
USF1P22415 RNU6-274P-201ENST00000459566 107 ntBASIC-0.97□□□□□ -2.56
USF1P22415 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.97□□□□□ -2.56
USF1P22415 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.98□□□□□ -2.57
USF1P22415 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.98□□□□□ -2.57
USF1P22415 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.98□□□□□ -2.57
USF1P22415 RNU6-431P-201ENST00000383874 107 ntBASIC-0.98□□□□□ -2.57
USF1P22415 SNORD64-201ENST00000386683 67 ntBASIC-0.98□□□□□ -2.57
USF1P22415 RNU6-239P-201ENST00000390990 99 ntBASIC-0.98□□□□□ -2.57
USF1P22415 RNU6-935P-201ENST00000410371 100 ntBASIC-0.98□□□□□ -2.57
USF1P22415 SCARNA18B-201ENST00000458806 135 ntBASIC-0.98□□□□□ -2.57
USF1P22415 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.98□□□□□ -2.57
USF1P22415 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.98□□□□□ -2.57
USF1P22415 AP002392.1-201ENST00000537692 208 ntBASIC-0.98□□□□□ -2.57
USF1P22415 MIR6854-201ENST00000614935 69 ntBASIC-0.98□□□□□ -2.57
USF1P22415 MIR4320-201ENST00000636981 65 ntBASIC-0.98□□□□□ -2.57
USF1P22415 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.99□□□□□ -2.57
USF1P22415 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.99□□□□□ -2.57
USF1P22415 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.99□□□□□ -2.57
USF1P22415 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.99□□□□□ -2.57
USF1P22415 MIR548G-201ENST00000408442 89 ntBASIC-0.99□□□□□ -2.57
USF1P22415 AC022137.1-201ENST00000483735 151 ntBASIC-0.99□□□□□ -2.57
USF1P22415 RNU6-762P-201ENST00000517107 102 ntBASIC-0.99□□□□□ -2.57
USF1P22415 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.99□□□□□ -2.57
USF1P22415 AL117187.1-201ENST00000555482 181 ntBASIC-0.99□□□□□ -2.57
USF1P22415 AC021753.1-201ENST00000635724 168 ntBASIC-0.99□□□□□ -2.57
USF1P22415 RNU6-1313P-201ENST00000362622 102 ntBASIC-1□□□□□ -2.57
USF1P22415 RNU6-867P-201ENST00000364956 107 ntBASIC-1□□□□□ -2.57
USF1P22415 RNU6-1160P-201ENST00000384546 104 ntBASIC-1□□□□□ -2.57
USF1P22415 RNU6-592P-201ENST00000411333 103 ntBASIC-1□□□□□ -2.57
USF1P22415 AL353813.1-201ENST00000440700 253 ntBASIC-1□□□□□ -2.57
USF1P22415 AP000533.3-201ENST00000447704 118 ntBASIC-1□□□□□ -2.57
USF1P22415 SNORD42B-201ENST00000458893 67 ntBASIC-1□□□□□ -2.57
USF1P22415 RN7SKP19-201ENST00000516016 252 ntBASIC-1□□□□□ -2.57
USF1P22415 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1□□□□□ -2.57
USF1P22415 AC140658.3-201ENST00000567603 271 ntBASIC-1□□□□□ -2.57
USF1P22415 DNAJC19P2-201ENST00000593340 302 ntBASIC-1□□□□□ -2.57
USF1P22415 RNU6-90P-201ENST00000606352 106 ntBASIC-1□□□□□ -2.57
USF1P22415 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.01□□□□□ -2.57
USF1P22415 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.01□□□□□ -2.57
USF1P22415 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.01□□□□□ -2.57
USF1P22415 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.01□□□□□ -2.57
USF1P22415 SNORD74.6-201ENST00000364796 70 ntBASIC-1.01□□□□□ -2.57
USF1P22415 MIR759-201ENST00000390224 91 ntBASIC-1.01□□□□□ -2.57
USF1P22415 RNU6-466P-201ENST00000391224 103 ntBASIC-1.01□□□□□ -2.57
USF1P22415 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.01□□□□□ -2.57
USF1P22415 RNU7-121P-201ENST00000516604 62 ntBASIC-1.01□□□□□ -2.57
USF1P22415 AL512310.12-203ENST00000640543 90 ntBASIC-1.01□□□□□ -2.57
USF1P22415 SNORD38.1-201ENST00000363863 68 ntBASIC-1.02□□□□□ -2.57
USF1P22415 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.02□□□□□ -2.57
USF1P22415 RNU6-905P-201ENST00000384434 107 ntBASIC-1.02□□□□□ -2.57
USF1P22415 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.02□□□□□ -2.57
USF1P22415 MIR3658-201ENST00000636291 56 ntBASIC-1.02□□□□□ -2.57
USF1P22415 MIR382-201ENST00000637119 76 ntBASIC-1.02□□□□□ -2.57
USF1P22415 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.03□□□□□ -2.57
USF1P22415 SNORD115-23-201ENST00000364461 82 ntBASIC-1.03□□□□□ -2.57
USF1P22415 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.03□□□□□ -2.57
USF1P22415 RNU6-24P-201ENST00000384440 107 ntBASIC-1.03□□□□□ -2.57
USF1P22415 MIR451A-201ENST00000385059 72 ntBASIC-1.03□□□□□ -2.57
USF1P22415 MIR1468-201ENST00000410600 86 ntBASIC-1.03□□□□□ -2.57
USF1P22415 SNORA7.5-201ENST00000410672 110 ntBASIC-1.03□□□□□ -2.57
USF1P22415 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.03□□□□□ -2.57
USF1P22415 MIR6773-201ENST00000612812 74 ntBASIC-1.03□□□□□ -2.57
USF1P22415 RNU6-797P-201ENST00000363101 109 ntBASIC-1.04□□□□□ -2.58
USF1P22415 SNORD114-4-201ENST00000363962 75 ntBASIC-1.04□□□□□ -2.58
USF1P22415 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.04□□□□□ -2.58
USF1P22415 AL117351.2-201ENST00000513571 157 ntBASIC-1.04□□□□□ -2.58
USF1P22415 RNU6-75P-201ENST00000515944 104 ntBASIC-1.04□□□□□ -2.58
USF1P22415 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.05□□□□□ -2.58
USF1P22415 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.05□□□□□ -2.58
USF1P22415 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.05□□□□□ -2.58
USF1P22415 MIR147A-201ENST00000385079 72 ntBASIC-1.05□□□□□ -2.58
USF1P22415 U3.27-201ENST00000391237 200 ntBASIC-1.05□□□□□ -2.58
USF1P22415 RNU6-337P-201ENST00000391243 106 ntBASIC-1.05□□□□□ -2.58
USF1P22415 AP001094.1-201ENST00000579805 193 ntBASIC-1.05□□□□□ -2.58
USF1P22415 RNU6-363P-201ENST00000362895 105 ntBASIC-1.06□□□□□ -2.58
USF1P22415 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.06□□□□□ -2.58
USF1P22415 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.06□□□□□ -2.58
USF1P22415 MIRLET7B-201ENST00000385140 83 ntBASIC-1.06□□□□□ -2.58
USF1P22415 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.06□□□□□ -2.58
USF1P22415 AC130289.1-201ENST00000577321 73 ntBASIC-1.06□□□□□ -2.58
USF1P22415 MIR3121-201ENST00000579680 77 ntBASIC-1.06□□□□□ -2.58
USF1P22415 MIR4306-201ENST00000583390 91 ntBASIC-1.06□□□□□ -2.58
USF1P22415 AC008737.2-201ENST00000599446 118 ntBASIC-1.06□□□□□ -2.58
USF1P22415 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.07□□□□□ -2.58
USF1P22415 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.07□□□□□ -2.58
USF1P22415 MIR3128-201ENST00000581957 66 ntBASIC-1.07□□□□□ -2.58
USF1P22415 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.08□□□□□ -2.58
USF1P22415 MIR3115-201ENST00000577915 68 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms