Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RNU6-42P-201ENST00000384165 107 ntBASIC2.38□□□□□ -2.03
CHGAP10645 RNU4-52P-201ENST00000384209 138 ntBASIC2.38□□□□□ -2.03
CHGAP10645 RNU7-13P-201ENST00000516413 62 ntBASIC2.38□□□□□ -2.03
CHGAP10645 MIR664A-201ENST00000626086 82 ntBASIC2.38□□□□□ -2.03
CHGAP10645 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.37□□□□□ -2.03
CHGAP10645 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CHGAP10645 RNU6-1052P-201ENST00000411398 104 ntBASIC2.37□□□□□ -2.03
CHGAP10645 RNU6-719P-201ENST00000516671 104 ntBASIC2.37□□□□□ -2.03
CHGAP10645 U6.81-201ENST00000612550 106 ntBASIC2.37□□□□□ -2.03
CHGAP10645 SNORD115-24-201ENST00000363528 82 ntBASIC2.36□□□□□ -2.03
CHGAP10645 MIR222-201ENST00000384992 110 ntBASIC2.36□□□□□ -2.03
CHGAP10645 AC002429.1-201ENST00000437672 148 ntBASIC2.36□□□□□ -2.03
CHGAP10645 MIR4285-201ENST00000581001 85 ntBASIC2.36□□□□□ -2.03
CHGAP10645 MIR4452-201ENST00000583004 71 ntBASIC2.36□□□□□ -2.03
CHGAP10645 MIR4448-201ENST00000584360 86 ntBASIC2.36□□□□□ -2.03
CHGAP10645 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.36□□□□□ -2.03
CHGAP10645 RNA5SP403-201ENST00000363598 108 ntBASIC2.35□□□□□ -2.03
CHGAP10645 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CHGAP10645 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.34□□□□□ -2.03
CHGAP10645 AL136317.1-201ENST00000612653 226 ntBASIC2.34□□□□□ -2.03
CHGAP10645 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.34□□□□□ -2.03
CHGAP10645 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CHGAP10645 RNU6-330P-201ENST00000363015 107 ntBASIC2.33□□□□□ -2.04
CHGAP10645 RNU6-1241P-201ENST00000384536 107 ntBASIC2.33□□□□□ -2.04
CHGAP10645 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CHGAP10645 AL078603.1-201ENST00000603824 313 ntBASIC2.33□□□□□ -2.04
CHGAP10645 RNU6-824P-201ENST00000363724 104 ntBASIC2.32□□□□□ -2.04
CHGAP10645 SNORA25-201ENST00000384384 134 ntBASIC2.32□□□□□ -2.04
CHGAP10645 MIR154-201ENST00000385243 84 ntBASIC2.32□□□□□ -2.04
CHGAP10645 RNU6-1177P-201ENST00000391058 104 ntBASIC2.32□□□□□ -2.04
CHGAP10645 MIR3675-201ENST00000583661 73 ntBASIC2.32□□□□□ -2.04
CHGAP10645 MIR6779-201ENST00000617283 64 ntBASIC2.32□□□□□ -2.04
CHGAP10645 MIR6734-201ENST00000621166 68 ntBASIC2.32□□□□□ -2.04
CHGAP10645 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CHGAP10645 MIR216B-201ENST00000390186 82 ntBASIC2.31□□□□□ -2.04
CHGAP10645 SNORA67.6-201ENST00000391093 99 ntBASIC2.31□□□□□ -2.04
CHGAP10645 MIR1323-201ENST00000408090 73 ntBASIC2.31□□□□□ -2.04
CHGAP10645 MIR2113-201ENST00000459007 91 ntBASIC2.31□□□□□ -2.04
CHGAP10645 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.31□□□□□ -2.04
CHGAP10645 RNA5SP220-201ENST00000516298 104 ntBASIC2.3□□□□□ -2.04
CHGAP10645 RNU1-92P-201ENST00000517017 135 ntBASIC2.3□□□□□ -2.04
CHGAP10645 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CHGAP10645 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHGAP10645 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CHGAP10645 RNU6-1126P-201ENST00000384002 107 ntBASIC2.29□□□□□ -2.04
CHGAP10645 RNU6-1110P-201ENST00000516462 101 ntBASIC2.29□□□□□ -2.04
CHGAP10645 RNU6-135P-201ENST00000516769 101 ntBASIC2.29□□□□□ -2.04
CHGAP10645 RNU7-161P-201ENST00000517289 62 ntBASIC2.29□□□□□ -2.04
CHGAP10645 RNA5SP102-201ENST00000516865 106 ntBASIC2.28□□□□□ -2.04
CHGAP10645 MIR3920-201ENST00000581751 86 ntBASIC2.28□□□□□ -2.04
CHGAP10645 SNORD114-26-201ENST00000363543 72 ntBASIC2.27□□□□□ -2.05
CHGAP10645 SNORA7.1-201ENST00000363750 139 ntBASIC2.27□□□□□ -2.05
CHGAP10645 RNA5SP117-201ENST00000365294 118 ntBASIC2.27□□□□□ -2.05
CHGAP10645 RNU6-649P-201ENST00000384463 107 ntBASIC2.27□□□□□ -2.05
CHGAP10645 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CHGAP10645 AC002350.1-201ENST00000490759 375 ntBASIC2.27□□□□□ -2.05
CHGAP10645 uc_338.20-201ENST00000621563 178 ntBASIC2.27□□□□□ -2.05
CHGAP10645 FABP5P4-201ENST00000437203 171 ntBASIC2.26□□□□□ -2.05
CHGAP10645 RNA5SP364-201ENST00000516938 78 ntBASIC2.26□□□□□ -2.05
CHGAP10645 RNU1-123P-201ENST00000458950 160 ntBASIC2.25□□□□□ -2.05
CHGAP10645 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.25□□□□□ -2.05
CHGAP10645 RNA5SP327-201ENST00000362494 101 ntBASIC2.24□□□□□ -2.05
CHGAP10645 SNORD48-201ENST00000364953 64 ntBASIC2.24□□□□□ -2.05
CHGAP10645 RNU6-540P-201ENST00000384622 101 ntBASIC2.24□□□□□ -2.05
CHGAP10645 MIR617-201ENST00000385030 97 ntBASIC2.24□□□□□ -2.05
CHGAP10645 SUMO2P12-201ENST00000405924 140 ntBASIC2.24□□□□□ -2.05
CHGAP10645 U7.7-201ENST00000459276 60 ntBASIC2.24□□□□□ -2.05
CHGAP10645 RNU7-104P-201ENST00000459398 79 ntBASIC2.24□□□□□ -2.05
CHGAP10645 RNU6-752P-201ENST00000516376 102 ntBASIC2.24□□□□□ -2.05
CHGAP10645 MIR548AG2-201ENST00000581228 64 ntBASIC2.24□□□□□ -2.05
CHGAP10645 AC067863.3-201ENST00000624172 122 ntBASIC2.24□□□□□ -2.05
CHGAP10645 SNORD114-22-201ENST00000365423 72 ntBASIC2.23□□□□□ -2.05
CHGAP10645 RNU6-274P-201ENST00000459566 107 ntBASIC2.23□□□□□ -2.05
CHGAP10645 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.23□□□□□ -2.05
CHGAP10645 SNORD89-201ENST00000390981 114 ntBASIC2.22□□□□□ -2.05
CHGAP10645 SNORD30.1-201ENST00000391309 70 ntBASIC2.22□□□□□ -2.05
CHGAP10645 MIR4421-201ENST00000578133 69 ntBASIC2.22□□□□□ -2.05
CHGAP10645 MIR4773-1-201ENST00000637203 78 ntBASIC2.22□□□□□ -2.05
CHGAP10645 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CHGAP10645 MIR517C-201ENST00000385103 95 ntBASIC2.21□□□□□ -2.06
CHGAP10645 MIR8053-201ENST00000613344 75 ntBASIC2.21□□□□□ -2.06
CHGAP10645 RNU6-382P-201ENST00000365181 106 ntBASIC2.2□□□□□ -2.06
CHGAP10645 MIR19B1-201ENST00000384829 87 ntBASIC2.2□□□□□ -2.06
CHGAP10645 SNORD105-201ENST00000386910 85 ntBASIC2.2□□□□□ -2.06
CHGAP10645 RNU6-469P-201ENST00000516253 101 ntBASIC2.2□□□□□ -2.06
CHGAP10645 SNORA31.24-201ENST00000517232 57 ntBASIC2.2□□□□□ -2.06
CHGAP10645 MIR4639-201ENST00000584938 69 ntBASIC2.2□□□□□ -2.06
CHGAP10645 SNORD115-31-201ENST00000365318 82 ntBASIC2.19□□□□□ -2.06
CHGAP10645 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CHGAP10645 AL354695.1-201ENST00000427935 228 ntBASIC2.19□□□□□ -2.06
CHGAP10645 MIR644A-201ENST00000385262 94 ntBASIC2.18□□□□□ -2.06
CHGAP10645 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.18□□□□□ -2.06
CHGAP10645 RNU7-74P-201ENST00000459104 62 ntBASIC2.18□□□□□ -2.06
CHGAP10645 AC125388.1-201ENST00000459631 156 ntBASIC2.18□□□□□ -2.06
CHGAP10645 AC022709.1-201ENST00000615967 87 ntBASIC2.18□□□□□ -2.06
CHGAP10645 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.18□□□□□ -2.06
CHGAP10645 Y_RNA.258-201ENST00000364613 105 ntBASIC2.17□□□□□ -2.06
CHGAP10645 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CHGAP10645 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
CHGAP10645 SNORD45.1-201ENST00000363181 77 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 256.7 ms