Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC069271.1-201ENST00000445577 156 ntBASIC0.48□□□□□ -2.33
MMP3P08254 AL513043.2-201ENST00000573941 143 ntBASIC0.48□□□□□ -2.33
MMP3P08254 MIR4752-201ENST00000579672 72 ntBASIC0.48□□□□□ -2.33
MMP3P08254 TRDV1-202ENST00000621643 102 ntBASIC0.48□□□□□ -2.33
MMP3P08254 AC067863.3-201ENST00000624172 122 ntBASIC0.48□□□□□ -2.33
MMP3P08254 RNU6-726P-201ENST00000364680 107 ntBASIC0.47□□□□□ -2.33
MMP3P08254 RNU6-644P-201ENST00000391155 98 ntBASIC0.47□□□□□ -2.33
MMP3P08254 RNU7-61P-201ENST00000515897 61 ntBASIC0.47□□□□□ -2.33
MMP3P08254 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
MMP3P08254 RNU6-1265P-201ENST00000516342 103 ntBASIC0.47□□□□□ -2.33
MMP3P08254 RNA5SP62-201ENST00000363457 110 ntBASIC0.46□□□□□ -2.34
MMP3P08254 RNU7-13P-201ENST00000516413 62 ntBASIC0.46□□□□□ -2.34
MMP3P08254 MIR4514-201ENST00000581410 57 ntBASIC0.46□□□□□ -2.34
MMP3P08254 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
MMP3P08254 U6.100-201ENST00000636230 99 ntBASIC0.46□□□□□ -2.34
MMP3P08254 MIR103A1-201ENST00000362165 78 ntBASIC0.45□□□□□ -2.34
MMP3P08254 Y_RNA.107-201ENST00000363190 121 ntBASIC0.45□□□□□ -2.34
MMP3P08254 RNU6-755P-201ENST00000364400 103 ntBASIC0.45□□□□□ -2.34
MMP3P08254 RNU6-1113P-201ENST00000384348 107 ntBASIC0.45□□□□□ -2.34
MMP3P08254 RNU6-162P-201ENST00000516228 103 ntBASIC0.45□□□□□ -2.34
MMP3P08254 MIR4439-201ENST00000583746 80 ntBASIC0.45□□□□□ -2.34
MMP3P08254 MIR2909-201ENST00000617113 69 ntBASIC0.45□□□□□ -2.34
MMP3P08254 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
MMP3P08254 RNU6-147P-201ENST00000383983 107 ntBASIC0.44□□□□□ -2.34
MMP3P08254 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
MMP3P08254 RNU6-466P-201ENST00000391224 103 ntBASIC0.44□□□□□ -2.34
MMP3P08254 SNORA62.5-201ENST00000516634 120 ntBASIC0.44□□□□□ -2.34
MMP3P08254 MIR3920-201ENST00000581751 86 ntBASIC0.44□□□□□ -2.34
MMP3P08254 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
MMP3P08254 Y_RNA.283-201ENST00000364798 112 ntBASIC0.43□□□□□ -2.34
MMP3P08254 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.43□□□□□ -2.34
MMP3P08254 Y_RNA.423-201ENST00000384057 113 ntBASIC0.42□□□□□ -2.34
MMP3P08254 RNU6-269P-201ENST00000391077 97 ntBASIC0.42□□□□□ -2.34
MMP3P08254 Y_RNA.705-201ENST00000516862 110 ntBASIC0.42□□□□□ -2.34
MMP3P08254 MIR548AG2-201ENST00000581228 64 ntBASIC0.42□□□□□ -2.34
MMP3P08254 Y_RNA.818-201ENST00000618813 71 ntBASIC0.42□□□□□ -2.34
MMP3P08254 SNORD44.1-201ENST00000363202 61 ntBASIC0.41□□□□□ -2.34
MMP3P08254 RNU6-1126P-201ENST00000384002 107 ntBASIC0.41□□□□□ -2.34
MMP3P08254 SNORD41.1-201ENST00000391000 69 ntBASIC0.41□□□□□ -2.34
MMP3P08254 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.41□□□□□ -2.34
MMP3P08254 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.41□□□□□ -2.34
MMP3P08254 RNU6-887P-201ENST00000410660 100 ntBASIC0.4□□□□□ -2.35
MMP3P08254 RNU7-85P-201ENST00000458851 63 ntBASIC0.4□□□□□ -2.35
MMP3P08254 Y_RNA.648-201ENST00000459455 110 ntBASIC0.4□□□□□ -2.35
MMP3P08254 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.4□□□□□ -2.35
MMP3P08254 SNORA70.25-201ENST00000612741 95 ntBASIC0.4□□□□□ -2.35
MMP3P08254 MIR6755-201ENST00000619993 66 ntBASIC0.4□□□□□ -2.35
MMP3P08254 AL162376.1-201ENST00000624117 175 ntBASIC0.4□□□□□ -2.35
MMP3P08254 Y_RNA.93-201ENST00000363066 109 ntBASIC0.39□□□□□ -2.35
MMP3P08254 Y_RNA.433-201ENST00000384089 102 ntBASIC0.39□□□□□ -2.35
MMP3P08254 Y_RNA.544-201ENST00000384650 113 ntBASIC0.39□□□□□ -2.35
MMP3P08254 RNU2-59P-201ENST00000410482 191 ntBASIC0.39□□□□□ -2.35
MMP3P08254 AC023932.2-201ENST00000603176 175 ntBASIC0.39□□□□□ -2.35
MMP3P08254 U7.3-201ENST00000616123 62 ntBASIC0.39□□□□□ -2.35
MMP3P08254 RNU6-972P-201ENST00000391208 107 ntBASIC0.38□□□□□ -2.35
MMP3P08254 RNU6-75P-201ENST00000515944 104 ntBASIC0.38□□□□□ -2.35
MMP3P08254 RNU6-287P-201ENST00000516230 98 ntBASIC0.38□□□□□ -2.35
MMP3P08254 RNU1-29P-201ENST00000606574 126 ntBASIC0.38□□□□□ -2.35
MMP3P08254 MIRLET7F1-201ENST00000362202 87 ntBASIC0.37□□□□□ -2.35
MMP3P08254 SNORD58A-201ENST00000383875 65 ntBASIC0.37□□□□□ -2.35
MMP3P08254 Y_RNA.495-201ENST00000384435 112 ntBASIC0.37□□□□□ -2.35
MMP3P08254 RNA5SP63-201ENST00000391225 112 ntBASIC0.37□□□□□ -2.35
MMP3P08254 Y_RNA.596-201ENST00000410462 109 ntBASIC0.37□□□□□ -2.35
MMP3P08254 MTATP8P2-201ENST00000435212 202 ntBASIC0.37□□□□□ -2.35
MMP3P08254 RNA5SP484-201ENST00000458857 111 ntBASIC0.37□□□□□ -2.35
MMP3P08254 MIR2113-201ENST00000459007 91 ntBASIC0.37□□□□□ -2.35
MMP3P08254 RNU7-129P-201ENST00000516128 62 ntBASIC0.37□□□□□ -2.35
MMP3P08254 RNU6-1232P-201ENST00000516299 86 ntBASIC0.37□□□□□ -2.35
MMP3P08254 AP001318.4-201ENST00000616637 121 ntBASIC0.37□□□□□ -2.35
MMP3P08254 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
MMP3P08254 RNU6-32P-201ENST00000383948 107 ntBASIC0.36□□□□□ -2.35
MMP3P08254 SNORD101-201ENST00000384027 73 ntBASIC0.36□□□□□ -2.35
MMP3P08254 RNU6-13P-201ENST00000384248 107 ntBASIC0.36□□□□□ -2.35
MMP3P08254 RNU6-12P-201ENST00000384604 107 ntBASIC0.36□□□□□ -2.35
MMP3P08254 RNU6-41P-201ENST00000384741 107 ntBASIC0.36□□□□□ -2.35
MMP3P08254 RNU6-65P-201ENST00000516332 98 ntBASIC0.36□□□□□ -2.35
MMP3P08254 NAMPTP3-201ENST00000569273 224 ntBASIC0.36□□□□□ -2.35
MMP3P08254 MIR4536-1-201ENST00000583537 88 ntBASIC0.36□□□□□ -2.35
MMP3P08254 Y_RNA.190-201ENST00000363964 101 ntBASIC0.35□□□□□ -2.35
MMP3P08254 Y_RNA.207-201ENST00000364142 106 ntBASIC0.35□□□□□ -2.35
MMP3P08254 Y_RNA.290-201ENST00000364879 114 ntBASIC0.35□□□□□ -2.35
MMP3P08254 RNU6-815P-201ENST00000384080 113 ntBASIC0.35□□□□□ -2.35
MMP3P08254 MIR519E-201ENST00000385075 84 ntBASIC0.35□□□□□ -2.35
MMP3P08254 RNU6-519P-201ENST00000410590 108 ntBASIC0.35□□□□□ -2.35
MMP3P08254 MIR4696-201ENST00000581431 70 ntBASIC0.35□□□□□ -2.35
MMP3P08254 RNU6-153P-201ENST00000364422 104 ntBASIC0.34□□□□□ -2.36
MMP3P08254 SNORD115-44-201ENST00000365391 82 ntBASIC0.34□□□□□ -2.36
MMP3P08254 Y_RNA.348-201ENST00000365403 103 ntBASIC0.34□□□□□ -2.36
MMP3P08254 MIR760-201ENST00000390220 80 ntBASIC0.34□□□□□ -2.36
MMP3P08254 AC073261.1-201ENST00000429409 121 ntBASIC0.34□□□□□ -2.36
MMP3P08254 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.34□□□□□ -2.36
MMP3P08254 RNU6-664P-201ENST00000362381 107 ntBASIC0.33□□□□□ -2.36
MMP3P08254 RNU6-132P-201ENST00000383863 107 ntBASIC0.33□□□□□ -2.36
MMP3P08254 MIR617-201ENST00000385030 97 ntBASIC0.33□□□□□ -2.36
MMP3P08254 Y_RNA.609-201ENST00000410669 89 ntBASIC0.33□□□□□ -2.36
MMP3P08254 AC026421.1-201ENST00000519101 163 ntBASIC0.33□□□□□ -2.36
MMP3P08254 MTRNR2L2-201ENST00000604882 87 ntBASIC0.33□□□□□ -2.36
MMP3P08254 Y_RNA.81-201ENST00000362997 102 ntBASIC0.32□□□□□ -2.36
MMP3P08254 Y_RNA.96-201ENST00000363092 109 ntBASIC0.32□□□□□ -2.36
MMP3P08254 RNU6-640P-201ENST00000363693 105 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 1010 ms