Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 snoU13.11-201ENST00000459219 104 ntBASIC-1.42□□□□□ -2.64
LSM1O15116 AL512310.12-203ENST00000640543 90 ntBASIC-1.42□□□□□ -2.64
LSM1O15116 SNORD114-4-201ENST00000363962 75 ntBASIC-1.43□□□□□ -2.64
LSM1O15116 SNORD74.6-201ENST00000364796 70 ntBASIC-1.43□□□□□ -2.64
LSM1O15116 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.43□□□□□ -2.64
LSM1O15116 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.43□□□□□ -2.64
LSM1O15116 AL117187.1-201ENST00000555482 181 ntBASIC-1.43□□□□□ -2.64
LSM1O15116 AC130289.1-201ENST00000577321 73 ntBASIC-1.43□□□□□ -2.64
LSM1O15116 MIR6854-201ENST00000614935 69 ntBASIC-1.43□□□□□ -2.64
LSM1O15116 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.44□□□□□ -2.64
LSM1O15116 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
LSM1O15116 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.44□□□□□ -2.64
LSM1O15116 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.45□□□□□ -2.64
LSM1O15116 MIR548D2-201ENST00000384955 97 ntBASIC-1.45□□□□□ -2.64
LSM1O15116 MIR451A-201ENST00000385059 72 ntBASIC-1.45□□□□□ -2.64
LSM1O15116 SNORD37.2-201ENST00000391075 66 ntBASIC-1.45□□□□□ -2.64
LSM1O15116 SNORD42B-201ENST00000458893 67 ntBASIC-1.45□□□□□ -2.64
LSM1O15116 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.45□□□□□ -2.64
LSM1O15116 RNU6-75P-201ENST00000515944 104 ntBASIC-1.45□□□□□ -2.64
LSM1O15116 RNU6-762P-201ENST00000517107 102 ntBASIC-1.45□□□□□ -2.64
LSM1O15116 AC044792.1-201ENST00000593294 196 ntBASIC-1.45□□□□□ -2.64
LSM1O15116 MIR8068-201ENST00000618032 68 ntBASIC-1.45□□□□□ -2.64
LSM1O15116 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.46□□□□□ -2.64
LSM1O15116 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.46□□□□□ -2.64
LSM1O15116 RNU6-592P-201ENST00000411333 103 ntBASIC-1.46□□□□□ -2.64
LSM1O15116 AL500527.2-201ENST00000454105 95 ntBASIC-1.46□□□□□ -2.64
LSM1O15116 RNU7-197P-201ENST00000458836 62 ntBASIC-1.46□□□□□ -2.64
LSM1O15116 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.46□□□□□ -2.64
LSM1O15116 MIR4324-201ENST00000584846 72 ntBASIC-1.46□□□□□ -2.64
LSM1O15116 MIR6738-201ENST00000619620 64 ntBASIC-1.46□□□□□ -2.64
LSM1O15116 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.47□□□□□ -2.64
LSM1O15116 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.47□□□□□ -2.64
LSM1O15116 AC022137.1-201ENST00000483735 151 ntBASIC-1.47□□□□□ -2.64
LSM1O15116 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.47□□□□□ -2.64
LSM1O15116 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.47□□□□□ -2.64
LSM1O15116 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.48□□□□□ -2.65
LSM1O15116 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.48□□□□□ -2.65
LSM1O15116 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.48□□□□□ -2.65
LSM1O15116 SNORD115-23-201ENST00000364461 82 ntBASIC-1.49□□□□□ -2.65
LSM1O15116 RNA5SP136-201ENST00000410906 107 ntBASIC-1.49□□□□□ -2.65
LSM1O15116 RN7SKP19-201ENST00000516016 252 ntBASIC-1.49□□□□□ -2.65
LSM1O15116 MIR6773-201ENST00000612812 74 ntBASIC-1.49□□□□□ -2.65
LSM1O15116 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.5□□□□□ -2.65
LSM1O15116 RNU6-30P-201ENST00000384561 107 ntBASIC-1.5□□□□□ -2.65
LSM1O15116 MIR517B-201ENST00000385102 67 ntBASIC-1.5□□□□□ -2.65
LSM1O15116 MIR759-201ENST00000390224 91 ntBASIC-1.5□□□□□ -2.65
LSM1O15116 RNA5SP476-201ENST00000516613 103 ntBASIC-1.5□□□□□ -2.65
LSM1O15116 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.5□□□□□ -2.65
LSM1O15116 MIR4499-201ENST00000584834 69 ntBASIC-1.5□□□□□ -2.65
LSM1O15116 AL442128.1-201ENST00000615151 90 ntBASIC-1.5□□□□□ -2.65
LSM1O15116 AP000533.3-201ENST00000447704 118 ntBASIC-1.51□□□□□ -2.65
LSM1O15116 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.51□□□□□ -2.65
LSM1O15116 RNA5SP470-201ENST00000516463 106 ntBASIC-1.51□□□□□ -2.65
LSM1O15116 RNU6-111P-201ENST00000517179 105 ntBASIC-1.51□□□□□ -2.65
LSM1O15116 MIR378F-201ENST00000578143 78 ntBASIC-1.51□□□□□ -2.65
LSM1O15116 MIR3128-201ENST00000581957 66 ntBASIC-1.51□□□□□ -2.65
LSM1O15116 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.52□□□□□ -2.65
LSM1O15116 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.52□□□□□ -2.65
LSM1O15116 RNU6-409P-201ENST00000384114 104 ntBASIC-1.52□□□□□ -2.65
LSM1O15116 RNU6-24P-201ENST00000384440 107 ntBASIC-1.52□□□□□ -2.65
LSM1O15116 AC022559.1-201ENST00000520905 205 ntBASIC-1.52□□□□□ -2.65
LSM1O15116 uc_338.19-201ENST00000616808 99 ntBASIC-1.52□□□□□ -2.65
LSM1O15116 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.53□□□□□ -2.65
LSM1O15116 SNORD114-25-201ENST00000363742 72 ntBASIC-1.53□□□□□ -2.65
LSM1O15116 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.53□□□□□ -2.65
LSM1O15116 MIRLET7B-201ENST00000385140 83 ntBASIC-1.53□□□□□ -2.65
LSM1O15116 RNU6-337P-201ENST00000391243 106 ntBASIC-1.53□□□□□ -2.65
LSM1O15116 RNU6-274P-201ENST00000459566 107 ntBASIC-1.53□□□□□ -2.65
LSM1O15116 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.53□□□□□ -2.65
LSM1O15116 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.53□□□□□ -2.65
LSM1O15116 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.54□□□□□ -2.66
LSM1O15116 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.55□□□□□ -2.66
LSM1O15116 RNU6-905P-201ENST00000384434 107 ntBASIC-1.55□□□□□ -2.66
LSM1O15116 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.55□□□□□ -2.66
LSM1O15116 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.56□□□□□ -2.66
LSM1O15116 RNU6-647P-201ENST00000364243 107 ntBASIC-1.56□□□□□ -2.66
LSM1O15116 RNU6-915P-201ENST00000364943 103 ntBASIC-1.56□□□□□ -2.66
LSM1O15116 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.56□□□□□ -2.66
LSM1O15116 RNU6-10P-201ENST00000384036 107 ntBASIC-1.56□□□□□ -2.66
LSM1O15116 RNA5SP67-201ENST00000516422 131 ntBASIC-1.56□□□□□ -2.66
LSM1O15116 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.56□□□□□ -2.66
LSM1O15116 SNORA81.3-201ENST00000517283 198 ntBASIC-1.56□□□□□ -2.66
LSM1O15116 AC141273.2-201ENST00000618989 130 ntBASIC-1.56□□□□□ -2.66
LSM1O15116 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.57□□□□□ -2.66
LSM1O15116 SNORA63.6-201ENST00000364921 119 ntBASIC-1.57□□□□□ -2.66
LSM1O15116 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.57□□□□□ -2.66
LSM1O15116 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.57□□□□□ -2.66
LSM1O15116 RNU6-460P-201ENST00000391158 108 ntBASIC-1.57□□□□□ -2.66
LSM1O15116 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.57□□□□□ -2.66
LSM1O15116 AC072026.1-201ENST00000605023 201 ntBASIC-1.57□□□□□ -2.66
LSM1O15116 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.58□□□□□ -2.66
LSM1O15116 RNU6-867P-201ENST00000364956 107 ntBASIC-1.58□□□□□ -2.66
LSM1O15116 RNU4-11P-201ENST00000365287 132 ntBASIC-1.58□□□□□ -2.66
LSM1O15116 MIR147A-201ENST00000385079 72 ntBASIC-1.58□□□□□ -2.66
LSM1O15116 RNU6-431P-201ENST00000383874 107 ntBASIC-1.59□□□□□ -2.66
LSM1O15116 MIR1263-201ENST00000408324 86 ntBASIC-1.59□□□□□ -2.66
LSM1O15116 HAR1A.1-201ENST00000459583 118 ntBASIC-1.59□□□□□ -2.66
LSM1O15116 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.59□□□□□ -2.66
LSM1O15116 snoR1.1-201ENST00000628177 80 ntBASIC-1.59□□□□□ -2.66
LSM1O15116 RNU6-495P-201ENST00000362995 107 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms