Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 SNORA40.13-201ENST00000516379 120 ntBASIC0.36□□□□□ -2.35
TRAFD1O14545 Y_RNA.677-201ENST00000516401 85 ntBASIC0.36□□□□□ -2.35
TRAFD1O14545 RNA5SP268-201ENST00000516828 124 ntBASIC0.36□□□□□ -2.35
TRAFD1O14545 RNU6-850P-201ENST00000516934 103 ntBASIC0.36□□□□□ -2.35
TRAFD1O14545 AL513043.2-201ENST00000573941 143 ntBASIC0.36□□□□□ -2.35
TRAFD1O14545 MIR548AG2-201ENST00000581228 64 ntBASIC0.36□□□□□ -2.35
TRAFD1O14545 AC062037.1-201ENST00000605302 128 ntBASIC0.36□□□□□ -2.35
TRAFD1O14545 U7.3-201ENST00000616123 62 ntBASIC0.36□□□□□ -2.35
TRAFD1O14545 AC244669.1-204ENST00000621564 178 ntBASIC0.36□□□□□ -2.35
TRAFD1O14545 MIR6828-201ENST00000636181 60 ntBASIC0.36□□□□□ -2.35
TRAFD1O14545 Y_RNA.56-201ENST00000362798 112 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 RNU6-624P-201ENST00000363411 107 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 SNORD73B-201ENST00000364394 72 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 RNU6-1131P-201ENST00000364955 107 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 RNU6-1113P-201ENST00000384348 107 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 MIR181B2-201ENST00000385004 89 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 SNORD90-201ENST00000391145 111 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 RNU6-887P-201ENST00000410660 100 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 MIR2113-201ENST00000459007 91 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 RNA5SP227-201ENST00000516184 113 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 RNU6-267P-201ENST00000516714 103 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 AC026421.1-201ENST00000519101 163 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 RNU6-86P-201ENST00000606534 107 ntBASIC0.35□□□□□ -2.35
TRAFD1O14545 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 Y_RNA.17-201ENST00000362433 111 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 RNU6-633P-201ENST00000362612 103 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 SNORD115-24-201ENST00000363528 82 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 Y_RNA.155-201ENST00000363632 101 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 SNORD45B-201ENST00000364617 72 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 RNU6-716P-201ENST00000365621 103 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 RNU6-132P-201ENST00000383863 107 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 SNORD28-201ENST00000384706 75 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 MIR1302-4-201ENST00000408701 150 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.34□□□□□ -2.36
TRAFD1O14545 RNU7-171P-201ENST00000459581 62 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 SNORA40.17-201ENST00000517256 115 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 RNU7-161P-201ENST00000517289 62 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 RNU6-90P-201ENST00000606352 106 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 AC103810.7-201ENST00000607821 91 ntBASIC0.34□□□□□ -2.36
TRAFD1O14545 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TRAFD1O14545 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 Y_RNA.221-201ENST00000364248 96 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 RNU4-36P-201ENST00000364294 144 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 Y_RNA.532-201ENST00000384590 113 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 MIR516A2-201ENST00000384888 90 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 MIR516A1-201ENST00000385033 90 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 SNORD41.1-201ENST00000391000 69 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 RNU6-1275P-201ENST00000391087 107 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 RNU6-972P-201ENST00000391208 107 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 RNY4P29-201ENST00000410801 97 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 SNORD63B-201ENST00000411005 70 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 AL161932.1-201ENST00000437408 146 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 AC069271.1-201ENST00000445577 156 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 snoU13.11-201ENST00000459219 104 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 Y_RNA.648-201ENST00000459455 110 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 Y_RNA.705-201ENST00000516862 110 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 RNA5SP47-201ENST00000517230 109 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 AC140658.3-201ENST00000567603 271 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 MIR4666B-201ENST00000578142 81 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 AC096720.1-201ENST00000604441 183 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 MIR7107-201ENST00000611489 80 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAFD1O14545 MIR2052-201ENST00000636055 55 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 AC006160.2-201ENST00000637708 154 ntBASIC0.33□□□□□ -2.36
TRAFD1O14545 Y_RNA.10-201ENST00000362371 110 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 Y_RNA.94-201ENST00000363068 106 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 SNORD116-10-201ENST00000363791 102 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 RNU6-524P-201ENST00000384270 107 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 MIR635-201ENST00000384830 98 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 AC097635.1-201ENST00000450678 155 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 RNU6-863P-201ENST00000515989 104 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 SCARNA16.5-201ENST00000517114 183 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 MIR548H5-201ENST00000580314 60 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 MIR3920-201ENST00000581751 86 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 MIR4668-201ENST00000582284 70 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 MIR4639-201ENST00000584938 69 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAFD1O14545 AL512310.12-203ENST00000640543 90 ntBASIC0.32□□□□□ -2.36
TRAFD1O14545 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 MIR330-201ENST00000362196 94 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNU6-509P-201ENST00000363519 107 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNU6-957P-201ENST00000363652 99 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNU6-478P-201ENST00000363904 110 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNU6-726P-201ENST00000364680 107 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 Y_RNA.283-201ENST00000364798 112 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNA5SP292-201ENST00000390974 118 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNU6-1254P-201ENST00000391266 104 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNU6-402P-201ENST00000410678 103 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNU7-195P-201ENST00000458793 62 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 Y_RNA.659-201ENST00000515994 113 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNU6-162P-201ENST00000516228 103 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNU6-523P-201ENST00000516304 54 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 RNU7-153P-201ENST00000516455 62 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 MIR4752-201ENST00000579672 72 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 MIR3064-201ENST00000581130 66 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 MIR4696-201ENST00000581431 70 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
TRAFD1O14545 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms