Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MIR4773-1-201ENST00000637203 78 ntBASIC2.1□□□□□ -2.07
CUEDC1Q9NWM3 AP000553.5-201ENST00000641933 54 ntBASIC2.1□□□□□ -2.07
CUEDC1Q9NWM3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CUEDC1Q9NWM3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CUEDC1Q9NWM3 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
CUEDC1Q9NWM3 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
CUEDC1Q9NWM3 AC244098.3-201ENST00000424803 96 ntBASIC2.09□□□□□ -2.07
CUEDC1Q9NWM3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.09□□□□□ -2.07
CUEDC1Q9NWM3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.09□□□□□ -2.08
CUEDC1Q9NWM3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-382P-201ENST00000365181 106 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.08□□□□□ -2.08
CUEDC1Q9NWM3 SNORD113.3-201ENST00000364630 78 ntBASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 MIR216B-201ENST00000390186 82 ntBASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 AC244505.6-201ENST00000452829 130 ntBASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 MIR3664-201ENST00000579074 99 ntBASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 MIR6132-201ENST00000622083 109 ntBASIC2.07□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-934P-201ENST00000365154 107 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 MTND4LP1-201ENST00000446263 157 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 RNU7-24P-201ENST00000458867 62 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 snoU13.21-201ENST00000459368 105 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-902P-201ENST00000517212 91 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 MIR4781-201ENST00000585250 76 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 AL645939.4-201ENST00000604495 135 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CUEDC1Q9NWM3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 Y_RNA.258-201ENST00000364613 105 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-1187P-201ENST00000364771 110 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 MIR633-201ENST00000384821 98 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 SNORD83.1-201ENST00000411362 77 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-287P-201ENST00000516230 98 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-977P-201ENST00000516411 103 ntBASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CUEDC1Q9NWM3 RNU6-535P-201ENST00000384722 107 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 SNORD75.2-201ENST00000408784 58 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 ZNF355P-201ENST00000427301 3216 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 AL691482.2-201ENST00000457453 84 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
CUEDC1Q9NWM3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 RN7SKP88-201ENST00000516847 250 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 AL512310.8-201ENST00000550183 120 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 AL078603.1-201ENST00000603824 313 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 AC008608.1-201ENST00000603910 127 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 7SK.8-201ENST00000612110 250 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 7SK.11-201ENST00000615477 250 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 7SK.13-201ENST00000622040 250 ntBASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CUEDC1Q9NWM3 Y_RNA.118-201ENST00000363300 101 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-542P-201ENST00000516405 103 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 MIR4771-2-201ENST00000577758 74 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 MIR3920-201ENST00000581751 86 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 MIR4771-1-201ENST00000582617 74 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.02□□□□□ -2.09
CUEDC1Q9NWM3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-668P-201ENST00000364180 107 ntBASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 AC036111.3-201ENST00000526389 112 ntBASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 snoU13.31-201ENST00000607291 104 ntBASIC2.01□□□□□ -2.09
CUEDC1Q9NWM3 RNU1-17P-201ENST00000363022 152 ntBASIC2□□□□□ -2.09
CUEDC1Q9NWM3 RNA5SP245-201ENST00000364239 121 ntBASIC2□□□□□ -2.09
CUEDC1Q9NWM3 Y_RNA.375-201ENST00000365625 101 ntBASIC2□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-495P-201ENST00000362995 107 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 SNORD111-201ENST00000408139 94 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RPS26P5-201ENST00000418544 335 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-982P-201ENST00000516216 102 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNU7-13P-201ENST00000516413 62 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 RNA5SP364-201ENST00000516938 78 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 AL109933.3-201ENST00000619095 188 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 AC073869.9-201ENST00000641610 120 ntBASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CUEDC1Q9NWM3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-1039P-201ENST00000383931 107 ntBASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-364P-201ENST00000384387 107 ntBASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 MIR4676-201ENST00000583078 72 ntBASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CUEDC1Q9NWM3 RNU6-829P-201ENST00000363700 112 ntBASIC1.97□□□□□ -2.09
CUEDC1Q9NWM3 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 266.7 ms