Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SNORD99-201ENST00000408612 74 ntBASIC0.93□□□□□ -2.26
AMBRA1Q9C0C7 SNORA31.14-201ENST00000516728 116 ntBASIC0.93□□□□□ -2.26
AMBRA1Q9C0C7 MALAT1.1-201ENST00000618249 95 ntBASIC0.93□□□□□ -2.26
AMBRA1Q9C0C7 AC025521.1-201ENST00000621624 286 ntBASIC0.93□□□□□ -2.26
AMBRA1Q9C0C7 Y_RNA.190-201ENST00000363964 101 ntBASIC0.92□□□□□ -2.26
AMBRA1Q9C0C7 Y_RNA.220-201ENST00000364244 109 ntBASIC0.92□□□□□ -2.26
AMBRA1Q9C0C7 Y_RNA.290-201ENST00000364879 114 ntBASIC0.92□□□□□ -2.26
AMBRA1Q9C0C7 MIR488-201ENST00000365739 83 ntBASIC0.92□□□□□ -2.26
AMBRA1Q9C0C7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
AMBRA1Q9C0C7 RNU7-195P-201ENST00000458793 62 ntBASIC0.92□□□□□ -2.26
AMBRA1Q9C0C7 SNORD116-10-201ENST00000363791 102 ntBASIC0.91□□□□□ -2.26
AMBRA1Q9C0C7 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
AMBRA1Q9C0C7 MIR573-201ENST00000384964 99 ntBASIC0.91□□□□□ -2.26
AMBRA1Q9C0C7 Y_RNA.809-201ENST00000516058 95 ntBASIC0.91□□□□□ -2.26
AMBRA1Q9C0C7 AC011195.1-201ENST00000578177 177 ntBASIC0.91□□□□□ -2.26
AMBRA1Q9C0C7 MIR5582-201ENST00000579697 68 ntBASIC0.91□□□□□ -2.26
AMBRA1Q9C0C7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
AMBRA1Q9C0C7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
AMBRA1Q9C0C7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.9□□□□□ -2.27
AMBRA1Q9C0C7 Y_RNA.178-201ENST00000363832 102 ntBASIC0.9□□□□□ -2.27
AMBRA1Q9C0C7 RNU6-1131P-201ENST00000364955 107 ntBASIC0.9□□□□□ -2.27
AMBRA1Q9C0C7 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
AMBRA1Q9C0C7 Y_RNA.30-201ENST00000362572 97 ntBASIC0.89□□□□□ -2.27
AMBRA1Q9C0C7 RNU6-1260P-201ENST00000362944 107 ntBASIC0.89□□□□□ -2.27
AMBRA1Q9C0C7 AC244505.6-201ENST00000452829 130 ntBASIC0.89□□□□□ -2.27
AMBRA1Q9C0C7 MIR1273G-201ENST00000577677 100 ntBASIC0.89□□□□□ -2.27
AMBRA1Q9C0C7 MIR3612-201ENST00000579753 87 ntBASIC0.89□□□□□ -2.27
AMBRA1Q9C0C7 AL590095.2-201ENST00000604136 117 ntBASIC0.89□□□□□ -2.27
AMBRA1Q9C0C7 AL353765.1-201ENST00000605514 183 ntBASIC0.89□□□□□ -2.27
AMBRA1Q9C0C7 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
AMBRA1Q9C0C7 Y_RNA.369-201ENST00000365568 117 ntBASIC0.88□□□□□ -2.27
AMBRA1Q9C0C7 RNY1P7-201ENST00000384743 110 ntBASIC0.88□□□□□ -2.27
AMBRA1Q9C0C7 MIR599-201ENST00000385069 95 ntBASIC0.88□□□□□ -2.27
AMBRA1Q9C0C7 MIR644A-201ENST00000385262 94 ntBASIC0.88□□□□□ -2.27
AMBRA1Q9C0C7 AC244098.3-201ENST00000424803 96 ntBASIC0.88□□□□□ -2.27
AMBRA1Q9C0C7 AC097635.1-201ENST00000450678 155 ntBASIC0.88□□□□□ -2.27
AMBRA1Q9C0C7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.88□□□□□ -2.27
AMBRA1Q9C0C7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.88□□□□□ -2.27
AMBRA1Q9C0C7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
AMBRA1Q9C0C7 RNU6-49P-201ENST00000384256 107 ntBASIC0.87□□□□□ -2.27
AMBRA1Q9C0C7 Y_RNA.648-201ENST00000459455 110 ntBASIC0.87□□□□□ -2.27
AMBRA1Q9C0C7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
AMBRA1Q9C0C7 RNU6-844P-201ENST00000517175 102 ntBASIC0.87□□□□□ -2.27
AMBRA1Q9C0C7 CYP3A137P-201ENST00000562436 69 ntBASIC0.87□□□□□ -2.27
AMBRA1Q9C0C7 Y_RNA.43-201ENST00000362670 111 ntBASIC0.86□□□□□ -2.27
AMBRA1Q9C0C7 RNU6-1255P-201ENST00000363434 112 ntBASIC0.86□□□□□ -2.27
AMBRA1Q9C0C7 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
AMBRA1Q9C0C7 RNU6-469P-201ENST00000516253 101 ntBASIC0.86□□□□□ -2.27
AMBRA1Q9C0C7 MIR3678-201ENST00000578455 94 ntBASIC0.86□□□□□ -2.27
AMBRA1Q9C0C7 RNA5SP457-201ENST00000363657 124 ntBASIC0.85□□□□□ -2.27
AMBRA1Q9C0C7 Y_RNA.221-201ENST00000364248 96 ntBASIC0.85□□□□□ -2.27
AMBRA1Q9C0C7 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
AMBRA1Q9C0C7 RNA5SP436-201ENST00000516020 115 ntBASIC0.85□□□□□ -2.27
AMBRA1Q9C0C7 RNU6-135P-201ENST00000516769 101 ntBASIC0.85□□□□□ -2.27
AMBRA1Q9C0C7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.85□□□□□ -2.27
AMBRA1Q9C0C7 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
AMBRA1Q9C0C7 RNU6-524P-201ENST00000384270 107 ntBASIC0.84□□□□□ -2.27
AMBRA1Q9C0C7 snoU13.11-201ENST00000459219 104 ntBASIC0.84□□□□□ -2.27
AMBRA1Q9C0C7 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
AMBRA1Q9C0C7 AC026421.1-201ENST00000519101 163 ntBASIC0.84□□□□□ -2.27
AMBRA1Q9C0C7 SNORD115-24-201ENST00000363528 82 ntBASIC0.83□□□□□ -2.28
AMBRA1Q9C0C7 RNU6-957P-201ENST00000363652 99 ntBASIC0.83□□□□□ -2.28
AMBRA1Q9C0C7 RNU6-294P-201ENST00000364999 102 ntBASIC0.83□□□□□ -2.28
AMBRA1Q9C0C7 RNU4-45P-201ENST00000365469 141 ntBASIC0.83□□□□□ -2.28
AMBRA1Q9C0C7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
AMBRA1Q9C0C7 Y_RNA.609-201ENST00000410669 89 ntBASIC0.83□□□□□ -2.28
AMBRA1Q9C0C7 RNA5SP222-201ENST00000411039 105 ntBASIC0.83□□□□□ -2.28
AMBRA1Q9C0C7 RNU6-466P-201ENST00000391224 103 ntBASIC0.82□□□□□ -2.28
AMBRA1Q9C0C7 RNU6-519P-201ENST00000410590 108 ntBASIC0.82□□□□□ -2.28
AMBRA1Q9C0C7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
AMBRA1Q9C0C7 MIR4536-1-201ENST00000583537 88 ntBASIC0.82□□□□□ -2.28
AMBRA1Q9C0C7 MIR924-201ENST00000638017 53 ntBASIC0.82□□□□□ -2.28
AMBRA1Q9C0C7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
AMBRA1Q9C0C7 MIR373-201ENST00000362273 69 ntBASIC0.81□□□□□ -2.28
AMBRA1Q9C0C7 Y_RNA.68-201ENST00000362881 102 ntBASIC0.81□□□□□ -2.28
AMBRA1Q9C0C7 Y_RNA.283-201ENST00000364798 112 ntBASIC0.81□□□□□ -2.28
AMBRA1Q9C0C7 SNORD116-22-201ENST00000384430 92 ntBASIC0.81□□□□□ -2.28
AMBRA1Q9C0C7 SNORD28-201ENST00000384706 75 ntBASIC0.81□□□□□ -2.28
AMBRA1Q9C0C7 AL161932.1-201ENST00000437408 146 ntBASIC0.81□□□□□ -2.28
AMBRA1Q9C0C7 RNU7-85P-201ENST00000458851 63 ntBASIC0.81□□□□□ -2.28
AMBRA1Q9C0C7 SNORD4B-201ENST00000459083 72 ntBASIC0.81□□□□□ -2.28
AMBRA1Q9C0C7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.81□□□□□ -2.28
AMBRA1Q9C0C7 MIR4639-201ENST00000584938 69 ntBASIC0.81□□□□□ -2.28
AMBRA1Q9C0C7 Y_RNA.115-201ENST00000363272 98 ntBASIC0.8□□□□□ -2.28
AMBRA1Q9C0C7 SNORD114-23-201ENST00000363536 72 ntBASIC0.8□□□□□ -2.28
AMBRA1Q9C0C7 RNA5SP403-201ENST00000363598 108 ntBASIC0.8□□□□□ -2.28
AMBRA1Q9C0C7 SNORD18A-201ENST00000363753 72 ntBASIC0.8□□□□□ -2.28
AMBRA1Q9C0C7 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
AMBRA1Q9C0C7 RNU6-65P-201ENST00000516332 98 ntBASIC0.8□□□□□ -2.28
AMBRA1Q9C0C7 AC006254.2-201ENST00000603259 279 ntBASIC0.8□□□□□ -2.28
AMBRA1Q9C0C7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.8□□□□□ -2.28
AMBRA1Q9C0C7 AC244669.1-204ENST00000621564 178 ntBASIC0.8□□□□□ -2.28
AMBRA1Q9C0C7 TRDV1-202ENST00000621643 102 ntBASIC0.8□□□□□ -2.28
AMBRA1Q9C0C7 RNU6-1229P-201ENST00000364295 107 ntBASIC0.79□□□□□ -2.28
AMBRA1Q9C0C7 RNU7-161P-201ENST00000517289 62 ntBASIC0.79□□□□□ -2.28
AMBRA1Q9C0C7 AC010487.4-201ENST00000637027 61 ntBASIC0.79□□□□□ -2.28
AMBRA1Q9C0C7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
AMBRA1Q9C0C7 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
AMBRA1Q9C0C7 RNU6-1134P-201ENST00000365156 101 ntBASIC0.78□□□□□ -2.28
AMBRA1Q9C0C7 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms