Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 SNORD2-201ENST00000459163 69 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 RNU6-850P-201ENST00000516934 103 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 MTND5P41-201ENST00000517498 206 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 CR383656.4-201ENST00000546909 122 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 MIR3925-201ENST00000584674 77 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 MIR214-201ENST00000385214 110 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 RNU7-165P-201ENST00000458864 60 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.09□□□□□ -2.42
SCN2AQ99250 MIR4493-201ENST00000584016 73 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 MIR4768-201ENST00000585270 74 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 U6.100-201ENST00000636230 99 ntBASIC-0.09□□□□□ -2.42
SCN2AQ99250 RNU6-664P-201ENST00000362381 107 ntBASIC-0.1□□□□□ -2.43
SCN2AQ99250 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.1□□□□□ -2.43
SCN2AQ99250 RNU6-90P-201ENST00000606352 106 ntBASIC-0.1□□□□□ -2.43
SCN2AQ99250 SNORD114-15-201ENST00000364687 72 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 MIR548D2-201ENST00000384955 97 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 AL670379.3-201ENST00000605040 251 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 uc_338.10-201ENST00000621872 182 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 MIR499B-201ENST00000636498 73 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 RNY4P3-201ENST00000365254 95 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 SNORA32.3-201ENST00000384772 121 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 RNA5SP163-201ENST00000410304 99 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 IGLVI-20-201ENST00000519296 130 ntBASIC-0.11□□□□□ -2.43
SCN2AQ99250 SNORD38.1-201ENST00000363863 68 ntBASIC-0.12□□□□□ -2.43
SCN2AQ99250 SNORD114-12-201ENST00000365400 75 ntBASIC-0.12□□□□□ -2.43
SCN2AQ99250 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.12□□□□□ -2.43
SCN2AQ99250 RNU6-521P-201ENST00000516663 105 ntBASIC-0.12□□□□□ -2.43
SCN2AQ99250 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.12□□□□□ -2.43
SCN2AQ99250 AP001328.1-201ENST00000528550 176 ntBASIC-0.12□□□□□ -2.43
SCN2AQ99250 AC025166.1-201ENST00000612411 163 ntBASIC-0.12□□□□□ -2.43
SCN2AQ99250 RNU6-161P-201ENST00000363051 106 ntBASIC-0.13□□□□□ -2.43
SCN2AQ99250 RNU6-756P-201ENST00000383997 107 ntBASIC-0.13□□□□□ -2.43
SCN2AQ99250 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.13□□□□□ -2.43
SCN2AQ99250 snoU13.19-201ENST00000459148 104 ntBASIC-0.13□□□□□ -2.43
SCN2AQ99250 RNU7-200P-201ENST00000516105 62 ntBASIC-0.13□□□□□ -2.43
SCN2AQ99250 RNA5SP227-201ENST00000516184 113 ntBASIC-0.13□□□□□ -2.43
SCN2AQ99250 RNU6-781P-201ENST00000516377 101 ntBASIC-0.13□□□□□ -2.43
SCN2AQ99250 AC096720.1-201ENST00000604441 183 ntBASIC-0.13□□□□□ -2.43
SCN2AQ99250 AC108676.2-201ENST00000605225 163 ntBASIC-0.13□□□□□ -2.43
SCN2AQ99250 RNU6-235P-201ENST00000362644 107 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNY4P6-201ENST00000363667 96 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNY1P11-201ENST00000363759 113 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNA5SP331-201ENST00000364986 107 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNU6-652P-201ENST00000365488 107 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNU6-409P-201ENST00000384114 104 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNU6-209P-201ENST00000384118 107 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 MIR106A-201ENST00000384870 81 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNU6-127P-201ENST00000390897 107 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNU7-6P-201ENST00000516845 62 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 U7.6-201ENST00000610841 64 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNA5SP98-201ENST00000363158 137 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNU6-957P-201ENST00000363652 99 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 MTND4LP9-201ENST00000427694 174 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 AC084368.1-201ENST00000620935 65 ntBASIC-0.14□□□□□ -2.43
SCN2AQ99250 MIR20A-201ENST00000362279 71 ntBASIC-0.15□□□□□ -2.43
SCN2AQ99250 RNA5SP403-201ENST00000363598 108 ntBASIC-0.15□□□□□ -2.43
SCN2AQ99250 MIR539-201ENST00000365690 78 ntBASIC-0.15□□□□□ -2.43
SCN2AQ99250 RPS29P8-201ENST00000445109 171 ntBASIC-0.15□□□□□ -2.43
SCN2AQ99250 MIR3671-201ENST00000580455 88 ntBASIC-0.15□□□□□ -2.43
SCN2AQ99250 MIR3920-201ENST00000581751 86 ntBASIC-0.15□□□□□ -2.43
SCN2AQ99250 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.15□□□□□ -2.43
SCN2AQ99250 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.16□□□□□ -2.43
SCN2AQ99250 SNORD58C-201ENST00000365223 64 ntBASIC-0.16□□□□□ -2.43
SCN2AQ99250 MIR519E-201ENST00000385075 84 ntBASIC-0.16□□□□□ -2.43
SCN2AQ99250 MT-TY-201ENST00000387409 66 ntBASIC-0.16□□□□□ -2.43
SCN2AQ99250 SNORA40-201ENST00000388090 126 ntBASIC-0.16□□□□□ -2.43
SCN2AQ99250 RNA5SP272-201ENST00000516095 111 ntBASIC-0.16□□□□□ -2.43
SCN2AQ99250 RNU6-180P-201ENST00000516697 61 ntBASIC-0.16□□□□□ -2.43
SCN2AQ99250 MTND5P18-201ENST00000445624 1801 ntBASIC-0.16□□□□□ -2.43
SCN2AQ99250 SNORA18.1-201ENST00000363418 128 ntBASIC-0.16□□□□□ -2.44
SCN2AQ99250 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
SCN2AQ99250 MIR1263-201ENST00000408324 86 ntBASIC-0.16□□□□□ -2.44
SCN2AQ99250 AC006210.1-201ENST00000424882 111 ntBASIC-0.16□□□□□ -2.44
SCN2AQ99250 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.17□□□□□ -2.44
SCN2AQ99250 MIR34C-201ENST00000384831 77 ntBASIC-0.17□□□□□ -2.44
SCN2AQ99250 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.17□□□□□ -2.44
SCN2AQ99250 MIR101-1-201ENST00000362265 75 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 SNORD115-44-201ENST00000365391 82 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 RNU6-804P-201ENST00000384286 107 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 RNU6-616P-201ENST00000384353 107 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 MIR4473-201ENST00000583731 91 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 SNORD114-31-201ENST00000363219 75 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 RNU1-141P-201ENST00000364623 158 ntBASIC-0.18□□□□□ -2.44
SCN2AQ99250 AC093423.1-201ENST00000440817 142 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms