Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MIR3678-201ENST00000578455 94 ntBASIC1.43□□□□□ -2.18
CALR3Q96L12 MIR1245B-201ENST00000636115 69 ntBASIC1.43□□□□□ -2.18
CALR3Q96L12 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.42□□□□□ -2.18
CALR3Q96L12 RNU6-1229P-201ENST00000364295 107 ntBASIC1.42□□□□□ -2.18
CALR3Q96L12 SNORD28-201ENST00000384706 75 ntBASIC1.42□□□□□ -2.18
CALR3Q96L12 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CALR3Q96L12 RNU7-13P-201ENST00000516413 62 ntBASIC1.42□□□□□ -2.18
CALR3Q96L12 MIR3202-2-201ENST00000635980 79 ntBASIC1.42□□□□□ -2.18
CALR3Q96L12 SNORA25.13-201ENST00000516395 103 ntBASIC1.41□□□□□ -2.18
CALR3Q96L12 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
CALR3Q96L12 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.41□□□□□ -2.18
CALR3Q96L12 AC140658.3-201ENST00000567603 271 ntBASIC1.41□□□□□ -2.18
CALR3Q96L12 AL353765.1-201ENST00000605514 183 ntBASIC1.41□□□□□ -2.18
CALR3Q96L12 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
CALR3Q96L12 ZNF209P-201ENST00000593450 2304 ntBASIC1.4□□□□□ -2.18
CALR3Q96L12 SNORD18A-201ENST00000363753 72 ntBASIC1.4□□□□□ -2.19
CALR3Q96L12 RNU4-45P-201ENST00000365469 141 ntBASIC1.4□□□□□ -2.19
CALR3Q96L12 RNU7-104P-201ENST00000459398 79 ntBASIC1.4□□□□□ -2.19
CALR3Q96L12 MIR4666B-201ENST00000578142 81 ntBASIC1.4□□□□□ -2.19
CALR3Q96L12 MIR3945-201ENST00000581853 98 ntBASIC1.4□□□□□ -2.19
CALR3Q96L12 AC244669.1-204ENST00000621564 178 ntBASIC1.4□□□□□ -2.19
CALR3Q96L12 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.4□□□□□ -2.19
CALR3Q96L12 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
CALR3Q96L12 RN7SL429P-201ENST00000479090 223 ntBASIC1.39□□□□□ -2.19
CALR3Q96L12 RN7SL489P-201ENST00000486185 223 ntBASIC1.39□□□□□ -2.19
CALR3Q96L12 RN7SL327P-201ENST00000488659 223 ntBASIC1.39□□□□□ -2.19
CALR3Q96L12 RN7SL853P-201ENST00000617250 223 ntBASIC1.39□□□□□ -2.19
CALR3Q96L12 AC067863.3-201ENST00000624172 122 ntBASIC1.39□□□□□ -2.19
CALR3Q96L12 MIR18A-201ENST00000362310 71 ntBASIC1.38□□□□□ -2.19
CALR3Q96L12 Y_RNA.437-201ENST00000384113 113 ntBASIC1.38□□□□□ -2.19
CALR3Q96L12 Y_RNA.207-201ENST00000364142 106 ntBASIC1.37□□□□□ -2.19
CALR3Q96L12 RNU6-935P-201ENST00000410371 100 ntBASIC1.37□□□□□ -2.19
CALR3Q96L12 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
CALR3Q96L12 SNORD13-201ENST00000459299 104 ntBASIC1.37□□□□□ -2.19
CALR3Q96L12 OR2A41P-201ENST00000473586 105 ntBASIC1.37□□□□□ -2.19
CALR3Q96L12 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.37□□□□□ -2.19
CALR3Q96L12 RNA5SP432-201ENST00000362480 116 ntBASIC1.36□□□□□ -2.19
CALR3Q96L12 SNORD78.1-201ENST00000390866 65 ntBASIC1.36□□□□□ -2.19
CALR3Q96L12 snoU13.26-201ENST00000459452 105 ntBASIC1.36□□□□□ -2.19
CALR3Q96L12 RNU6-287P-201ENST00000516230 98 ntBASIC1.36□□□□□ -2.19
CALR3Q96L12 RNA5SP47-201ENST00000517230 109 ntBASIC1.36□□□□□ -2.19
CALR3Q96L12 MIR3920-201ENST00000581751 86 ntBASIC1.36□□□□□ -2.19
CALR3Q96L12 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.35□□□□□ -2.19
CALR3Q96L12 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.35□□□□□ -2.19
CALR3Q96L12 RNU6-787P-201ENST00000384032 107 ntBASIC1.34□□□□□ -2.19
CALR3Q96L12 RNU6-1124P-201ENST00000384169 107 ntBASIC1.34□□□□□ -2.19
CALR3Q96L12 RNU6-1057P-201ENST00000517162 102 ntBASIC1.34□□□□□ -2.19
CALR3Q96L12 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
CALR3Q96L12 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.34□□□□□ -2.19
CALR3Q96L12 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CALR3Q96L12 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
CALR3Q96L12 MIR1261-201ENST00000408659 82 ntBASIC1.33□□□□□ -2.2
CALR3Q96L12 RNA5SP222-201ENST00000411039 105 ntBASIC1.33□□□□□ -2.2
CALR3Q96L12 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.33□□□□□ -2.2
CALR3Q96L12 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CALR3Q96L12 RNU6-624P-201ENST00000363411 107 ntBASIC1.32□□□□□ -2.2
CALR3Q96L12 Y_RNA.316-201ENST00000365118 111 ntBASIC1.32□□□□□ -2.2
CALR3Q96L12 RNU6-652P-201ENST00000365488 107 ntBASIC1.32□□□□□ -2.2
CALR3Q96L12 RNU6-1126P-201ENST00000384002 107 ntBASIC1.32□□□□□ -2.2
CALR3Q96L12 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.32□□□□□ -2.2
CALR3Q96L12 SCARNA16.5-201ENST00000517114 183 ntBASIC1.32□□□□□ -2.2
CALR3Q96L12 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
CALR3Q96L12 RNU6-228P-201ENST00000362700 106 ntBASIC1.31□□□□□ -2.2
CALR3Q96L12 RNY4P3-201ENST00000365254 95 ntBASIC1.31□□□□□ -2.2
CALR3Q96L12 MIR608-201ENST00000384820 100 ntBASIC1.31□□□□□ -2.2
CALR3Q96L12 MIR548L-201ENST00000408303 86 ntBASIC1.31□□□□□ -2.2
CALR3Q96L12 MIR2113-201ENST00000459007 91 ntBASIC1.31□□□□□ -2.2
CALR3Q96L12 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
CALR3Q96L12 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.31□□□□□ -2.2
CALR3Q96L12 RNU6-1051P-201ENST00000365471 102 ntBASIC1.3□□□□□ -2.2
CALR3Q96L12 SNORA11.2-201ENST00000408318 127 ntBASIC1.3□□□□□ -2.2
CALR3Q96L12 RNU6-548P-201ENST00000517083 115 ntBASIC1.3□□□□□ -2.2
CALR3Q96L12 Y_RNA.313-201ENST00000365095 103 ntBASIC1.29□□□□□ -2.2
CALR3Q96L12 MIR451A-201ENST00000385059 72 ntBASIC1.29□□□□□ -2.2
CALR3Q96L12 SNORD41.1-201ENST00000391000 69 ntBASIC1.29□□□□□ -2.2
CALR3Q96L12 MIR1289-2-201ENST00000408360 111 ntBASIC1.29□□□□□ -2.2
CALR3Q96L12 Y_RNA.685-201ENST00000516532 108 ntBASIC1.29□□□□□ -2.2
CALR3Q96L12 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CALR3Q96L12 MIR617-201ENST00000385030 97 ntBASIC1.28□□□□□ -2.2
CALR3Q96L12 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.28□□□□□ -2.2
CALR3Q96L12 RNU7-74P-201ENST00000459104 62 ntBASIC1.28□□□□□ -2.2
CALR3Q96L12 FGF7P7-201ENST00000514120 227 ntBASIC1.28□□□□□ -2.2
CALR3Q96L12 MIR548AG2-201ENST00000581228 64 ntBASIC1.28□□□□□ -2.2
CALR3Q96L12 SNORA63.2-201ENST00000362603 126 ntBASIC1.27□□□□□ -2.21
CALR3Q96L12 RNU6-726P-201ENST00000364680 107 ntBASIC1.27□□□□□ -2.21
CALR3Q96L12 RNU6-129P-201ENST00000391022 107 ntBASIC1.27□□□□□ -2.21
CALR3Q96L12 MIR1255A-201ENST00000408338 113 ntBASIC1.27□□□□□ -2.21
CALR3Q96L12 MIR6828-201ENST00000636181 60 ntBASIC1.27□□□□□ -2.21
CALR3Q96L12 SNORD90-201ENST00000391145 111 ntBASIC1.26□□□□□ -2.21
CALR3Q96L12 U3.27-201ENST00000391237 200 ntBASIC1.26□□□□□ -2.21
CALR3Q96L12 ACA64.5-201ENST00000516207 127 ntBASIC1.26□□□□□ -2.21
CALR3Q96L12 RNA5SP94-201ENST00000516917 108 ntBASIC1.26□□□□□ -2.21
CALR3Q96L12 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
CALR3Q96L12 RNU5F-1-201ENST00000362507 117 ntBASIC1.25□□□□□ -2.21
CALR3Q96L12 SNORA25.9-201ENST00000365087 128 ntBASIC1.25□□□□□ -2.21
CALR3Q96L12 RNU6-716P-201ENST00000365621 103 ntBASIC1.25□□□□□ -2.21
CALR3Q96L12 MIR1285-1-201ENST00000408593 84 ntBASIC1.25□□□□□ -2.21
CALR3Q96L12 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.25□□□□□ -2.21
CALR3Q96L12 RNU6-557P-201ENST00000516842 110 ntBASIC1.25□□□□□ -2.21
CALR3Q96L12 MIR216B-201ENST00000390186 82 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms