Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 Y_RNA.32-201ENST00000362589 110 ntBASIC1.03□□□□□ -2.24
RTF1Q92541 SNORD99-201ENST00000408612 74 ntBASIC1.03□□□□□ -2.24
RTF1Q92541 SNORA31.14-201ENST00000516728 116 ntBASIC1.03□□□□□ -2.24
RTF1Q92541 SNORD116-10-201ENST00000363791 102 ntBASIC1.02□□□□□ -2.25
RTF1Q92541 SNORD58A-201ENST00000383875 65 ntBASIC1.02□□□□□ -2.25
RTF1Q92541 MIR516A2-201ENST00000384888 90 ntBASIC1.02□□□□□ -2.25
RTF1Q92541 MIR516A1-201ENST00000385033 90 ntBASIC1.02□□□□□ -2.25
RTF1Q92541 AC244505.6-201ENST00000452829 130 ntBASIC1.02□□□□□ -2.25
RTF1Q92541 RNU7-106P-201ENST00000459514 67 ntBASIC1.02□□□□□ -2.25
RTF1Q92541 RNU6-135P-201ENST00000516769 101 ntBASIC1.02□□□□□ -2.25
RTF1Q92541 AL353765.1-201ENST00000605514 183 ntBASIC1.02□□□□□ -2.25
RTF1Q92541 U7.3-201ENST00000616123 62 ntBASIC1.02□□□□□ -2.25
RTF1Q92541 MIR6866-201ENST00000638146 69 ntBASIC1.02□□□□□ -2.25
RTF1Q92541 SNORD36A-201ENST00000362874 73 ntBASIC1.01□□□□□ -2.25
RTF1Q92541 RNU6-1260P-201ENST00000362944 107 ntBASIC1.01□□□□□ -2.25
RTF1Q92541 RNA5SP245-201ENST00000364239 121 ntBASIC1.01□□□□□ -2.25
RTF1Q92541 RNU6-243P-201ENST00000391140 107 ntBASIC1.01□□□□□ -2.25
RTF1Q92541 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.01□□□□□ -2.25
RTF1Q92541 AC244098.3-201ENST00000424803 96 ntBASIC1.01□□□□□ -2.25
RTF1Q92541 AL513043.2-201ENST00000573941 143 ntBASIC1.01□□□□□ -2.25
RTF1Q92541 MIR5000-201ENST00000577717 103 ntBASIC1.01□□□□□ -2.25
RTF1Q92541 MIR3612-201ENST00000579753 87 ntBASIC1.01□□□□□ -2.25
RTF1Q92541 MALAT1.1-201ENST00000618249 95 ntBASIC1.01□□□□□ -2.25
RTF1Q92541 RNU4-45P-201ENST00000365469 141 ntBASIC1□□□□□ -2.25
RTF1Q92541 RNU7-195P-201ENST00000458793 62 ntBASIC1□□□□□ -2.25
RTF1Q92541 Y_RNA.809-201ENST00000516058 95 ntBASIC1□□□□□ -2.25
RTF1Q92541 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1□□□□□ -2.25
RTF1Q92541 AC011195.1-201ENST00000578177 177 ntBASIC1□□□□□ -2.25
RTF1Q92541 AC025521.1-201ENST00000621624 286 ntBASIC1□□□□□ -2.25
RTF1Q92541 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
RTF1Q92541 Y_RNA.290-201ENST00000364879 114 ntBASIC0.99□□□□□ -2.25
RTF1Q92541 RNY1P4-201ENST00000384595 115 ntBASIC0.99□□□□□ -2.25
RTF1Q92541 RN7SL793P-201ENST00000583259 296 ntBASIC0.99□□□□□ -2.25
RTF1Q92541 MIR6835-201ENST00000621552 64 ntBASIC0.99□□□□□ -2.25
RTF1Q92541 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RTF1Q92541 MIR216A-201ENST00000385063 110 ntBASIC0.98□□□□□ -2.25
RTF1Q92541 MIR599-201ENST00000385069 95 ntBASIC0.98□□□□□ -2.25
RTF1Q92541 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.98□□□□□ -2.25
RTF1Q92541 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.98□□□□□ -2.25
RTF1Q92541 RNU6-1298P-201ENST00000362456 101 ntBASIC0.97□□□□□ -2.25
RTF1Q92541 Y_RNA.220-201ENST00000364244 109 ntBASIC0.97□□□□□ -2.25
RTF1Q92541 MIR488-201ENST00000365739 83 ntBASIC0.97□□□□□ -2.25
RTF1Q92541 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
RTF1Q92541 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.97□□□□□ -2.25
RTF1Q92541 RNU6-469P-201ENST00000516253 101 ntBASIC0.97□□□□□ -2.25
RTF1Q92541 Y_RNA.648-201ENST00000459455 110 ntBASIC0.96□□□□□ -2.26
RTF1Q92541 RNU6-162P-201ENST00000516228 103 ntBASIC0.96□□□□□ -2.26
RTF1Q92541 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.96□□□□□ -2.26
RTF1Q92541 MIR18A-201ENST00000362310 71 ntBASIC0.95□□□□□ -2.26
RTF1Q92541 MIR146A-201ENST00000385201 99 ntBASIC0.95□□□□□ -2.26
RTF1Q92541 RNY4P30-201ENST00000410216 95 ntBASIC0.95□□□□□ -2.26
RTF1Q92541 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
RTF1Q92541 RNA5SP170-201ENST00000517150 101 ntBASIC0.95□□□□□ -2.26
RTF1Q92541 MIR4714-201ENST00000580728 77 ntBASIC0.95□□□□□ -2.26
RTF1Q92541 MIR508-201ENST00000384857 115 ntBASIC0.94□□□□□ -2.26
RTF1Q92541 MIR644A-201ENST00000385262 94 ntBASIC0.94□□□□□ -2.26
RTF1Q92541 MIR3678-201ENST00000578455 94 ntBASIC0.94□□□□□ -2.26
RTF1Q92541 MIR4639-201ENST00000584938 69 ntBASIC0.94□□□□□ -2.26
RTF1Q92541 Y_RNA.30-201ENST00000362572 97 ntBASIC0.93□□□□□ -2.26
RTF1Q92541 Y_RNA.68-201ENST00000362881 102 ntBASIC0.93□□□□□ -2.26
RTF1Q92541 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.93□□□□□ -2.26
RTF1Q92541 Y_RNA.369-201ENST00000365568 117 ntBASIC0.92□□□□□ -2.26
RTF1Q92541 RNU6-524P-201ENST00000384270 107 ntBASIC0.92□□□□□ -2.26
RTF1Q92541 MIR193B-201ENST00000384907 83 ntBASIC0.92□□□□□ -2.26
RTF1Q92541 RNU6-466P-201ENST00000391224 103 ntBASIC0.92□□□□□ -2.26
RTF1Q92541 AL590095.2-201ENST00000604136 117 ntBASIC0.92□□□□□ -2.26
RTF1Q92541 SNORD115-24-201ENST00000363528 82 ntBASIC0.91□□□□□ -2.26
RTF1Q92541 SNORD18A-201ENST00000363753 72 ntBASIC0.91□□□□□ -2.26
RTF1Q92541 Y_RNA.190-201ENST00000363964 101 ntBASIC0.91□□□□□ -2.26
RTF1Q92541 RNU6-1131P-201ENST00000364955 107 ntBASIC0.91□□□□□ -2.26
RTF1Q92541 RNA5SP403-201ENST00000363598 108 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 RNA5SP457-201ENST00000363657 124 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 RNU6-1229P-201ENST00000364295 107 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 Y_RNA.283-201ENST00000364798 112 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 RNU6-110P-201ENST00000384508 104 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 SNORD28-201ENST00000384706 75 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 RNA5SP222-201ENST00000411039 105 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 snoU13.11-201ENST00000459219 104 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 RNA5SP436-201ENST00000516020 115 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 RNU6-1265P-201ENST00000516342 103 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 MIR5582-201ENST00000579697 68 ntBASIC0.9□□□□□ -2.27
RTF1Q92541 Y_RNA.221-201ENST00000364248 96 ntBASIC0.89□□□□□ -2.27
RTF1Q92541 RNU6-49P-201ENST00000384256 107 ntBASIC0.89□□□□□ -2.27
RTF1Q92541 RNU6-844P-201ENST00000517175 102 ntBASIC0.89□□□□□ -2.27
RTF1Q92541 MIR1273G-201ENST00000577677 100 ntBASIC0.89□□□□□ -2.27
RTF1Q92541 TRDV1-202ENST00000621643 102 ntBASIC0.89□□□□□ -2.27
RTF1Q92541 Y_RNA.43-201ENST00000362670 111 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 RNU6-957P-201ENST00000363652 99 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 RNY1P7-201ENST00000384743 110 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 RNU6-519P-201ENST00000410590 108 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 AL161932.1-201ENST00000437408 146 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 RNU7-85P-201ENST00000458851 63 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 RNA5SP47-201ENST00000517230 109 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.88□□□□□ -2.27
RTF1Q92541 Y_RNA.433-201ENST00000384089 102 ntBASIC0.87□□□□□ -2.27
RTF1Q92541 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.87□□□□□ -2.27
RTF1Q92541 SNORD4B-201ENST00000459083 72 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms