Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 Y_RNA.283-201ENST00000364798 112 ntBASIC1.64□□□□□ -2.15
PRPF40BQ6NWY9 RNU6-524P-201ENST00000384270 107 ntBASIC1.64□□□□□ -2.15
PRPF40BQ6NWY9 MIR520E-201ENST00000384867 87 ntBASIC1.64□□□□□ -2.15
PRPF40BQ6NWY9 RNU1-119P-201ENST00000391122 165 ntBASIC1.64□□□□□ -2.15
PRPF40BQ6NWY9 SNORA40.6-201ENST00000391153 128 ntBASIC1.64□□□□□ -2.15
PRPF40BQ6NWY9 MIR1255A-201ENST00000408338 113 ntBASIC1.64□□□□□ -2.15
PRPF40BQ6NWY9 AC092628.1-201ENST00000436250 252 ntBASIC1.64□□□□□ -2.15
PRPF40BQ6NWY9 Y_RNA.809-201ENST00000516058 95 ntBASIC1.64□□□□□ -2.15
PRPF40BQ6NWY9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.64□□□□□ -2.15
PRPF40BQ6NWY9 SNORD92-201ENST00000585078 85 ntBASIC1.64□□□□□ -2.15
PRPF40BQ6NWY9 RNU6-811P-201ENST00000384069 107 ntBASIC1.63□□□□□ -2.15
PRPF40BQ6NWY9 RNU6-535P-201ENST00000384722 107 ntBASIC1.63□□□□□ -2.15
PRPF40BQ6NWY9 RNU7-102P-201ENST00000458948 62 ntBASIC1.63□□□□□ -2.15
PRPF40BQ6NWY9 RPS29P1-201ENST00000465274 159 ntBASIC1.63□□□□□ -2.15
PRPF40BQ6NWY9 MIR4666B-201ENST00000578142 81 ntBASIC1.63□□□□□ -2.15
PRPF40BQ6NWY9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.63□□□□□ -2.15
PRPF40BQ6NWY9 MIR520F-201ENST00000384824 87 ntBASIC1.62□□□□□ -2.15
PRPF40BQ6NWY9 RNA5SP225-201ENST00000410874 135 ntBASIC1.62□□□□□ -2.15
PRPF40BQ6NWY9 RNU6-638P-201ENST00000516582 104 ntBASIC1.62□□□□□ -2.15
PRPF40BQ6NWY9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.62□□□□□ -2.15
PRPF40BQ6NWY9 AC138907.6-201ENST00000568401 126 ntBASIC1.62□□□□□ -2.15
PRPF40BQ6NWY9 AC138869.1-201ENST00000568623 124 ntBASIC1.62□□□□□ -2.15
PRPF40BQ6NWY9 MIR4804-201ENST00000581683 73 ntBASIC1.62□□□□□ -2.15
PRPF40BQ6NWY9 Y_RNA.30-201ENST00000362572 97 ntBASIC1.61□□□□□ -2.15
PRPF40BQ6NWY9 SNORA25-201ENST00000384384 134 ntBASIC1.61□□□□□ -2.15
PRPF40BQ6NWY9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.61□□□□□ -2.15
PRPF40BQ6NWY9 MIR6767-201ENST00000637302 66 ntBASIC1.61□□□□□ -2.15
PRPF40BQ6NWY9 RNU6-957P-201ENST00000363652 99 ntBASIC1.6□□□□□ -2.15
PRPF40BQ6NWY9 RNU6-652P-201ENST00000365488 107 ntBASIC1.6□□□□□ -2.15
PRPF40BQ6NWY9 MIR519A1-201ENST00000385257 85 ntBASIC1.6□□□□□ -2.15
PRPF40BQ6NWY9 MIR548U-201ENST00000390728 81 ntBASIC1.6□□□□□ -2.15
PRPF40BQ6NWY9 AC097635.1-201ENST00000450678 155 ntBASIC1.6□□□□□ -2.15
PRPF40BQ6NWY9 RNU6-448P-201ENST00000517052 107 ntBASIC1.6□□□□□ -2.15
PRPF40BQ6NWY9 AC068338.1-201ENST00000565567 176 ntBASIC1.6□□□□□ -2.15
PRPF40BQ6NWY9 RNA5SP327-201ENST00000362494 101 ntBASIC1.59□□□□□ -2.15
PRPF40BQ6NWY9 Y_RNA.313-201ENST00000365095 103 ntBASIC1.59□□□□□ -2.15
PRPF40BQ6NWY9 AC002429.1-201ENST00000437672 148 ntBASIC1.59□□□□□ -2.15
PRPF40BQ6NWY9 RNU6-1223P-201ENST00000517124 104 ntBASIC1.59□□□□□ -2.15
PRPF40BQ6NWY9 MIR7974-201ENST00000615835 79 ntBASIC1.59□□□□□ -2.15
PRPF40BQ6NWY9 Y_RNA.178-201ENST00000363832 102 ntBASIC1.58□□□□□ -2.16
PRPF40BQ6NWY9 RNU6-291P-201ENST00000384720 107 ntBASIC1.58□□□□□ -2.16
PRPF40BQ6NWY9 MIR599-201ENST00000385069 95 ntBASIC1.58□□□□□ -2.16
PRPF40BQ6NWY9 MIR758-201ENST00000390227 88 ntBASIC1.58□□□□□ -2.16
PRPF40BQ6NWY9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PRPF40BQ6NWY9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PRPF40BQ6NWY9 RNU7-153P-201ENST00000516455 62 ntBASIC1.58□□□□□ -2.16
PRPF40BQ6NWY9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PRPF40BQ6NWY9 RNU6-369P-201ENST00000362515 102 ntBASIC1.57□□□□□ -2.16
PRPF40BQ6NWY9 RNU6-1260P-201ENST00000362944 107 ntBASIC1.57□□□□□ -2.16
PRPF40BQ6NWY9 RNU6-787P-201ENST00000384032 107 ntBASIC1.57□□□□□ -2.16
PRPF40BQ6NWY9 MIR1827-201ENST00000408549 66 ntBASIC1.57□□□□□ -2.16
PRPF40BQ6NWY9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.57□□□□□ -2.16
PRPF40BQ6NWY9 AC008608.1-201ENST00000603910 127 ntBASIC1.57□□□□□ -2.16
PRPF40BQ6NWY9 TRDV1-202ENST00000621643 102 ntBASIC1.57□□□□□ -2.16
PRPF40BQ6NWY9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
PRPF40BQ6NWY9 Y_RNA.316-201ENST00000365118 111 ntBASIC1.56□□□□□ -2.16
PRPF40BQ6NWY9 SNORD26-201ENST00000384147 75 ntBASIC1.56□□□□□ -2.16
PRPF40BQ6NWY9 RNU7-56P-201ENST00000458744 62 ntBASIC1.56□□□□□ -2.16
PRPF40BQ6NWY9 MIR4796-201ENST00000580742 81 ntBASIC1.56□□□□□ -2.16
PRPF40BQ6NWY9 MIR151B-201ENST00000584249 96 ntBASIC1.56□□□□□ -2.16
PRPF40BQ6NWY9 AC104996.3-201ENST00000590718 94 ntBASIC1.56□□□□□ -2.16
PRPF40BQ6NWY9 AL136317.1-201ENST00000612653 226 ntBASIC1.56□□□□□ -2.16
PRPF40BQ6NWY9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PRPF40BQ6NWY9 RNU6-75P-201ENST00000515944 104 ntBASIC1.55□□□□□ -2.16
PRPF40BQ6NWY9 RNA5SP436-201ENST00000516020 115 ntBASIC1.55□□□□□ -2.16
PRPF40BQ6NWY9 SNORA25.13-201ENST00000516395 103 ntBASIC1.55□□□□□ -2.16
PRPF40BQ6NWY9 MIR6788-201ENST00000618842 66 ntBASIC1.55□□□□□ -2.16
PRPF40BQ6NWY9 MIRLET7F1-201ENST00000362202 87 ntBASIC1.54□□□□□ -2.16
PRPF40BQ6NWY9 MIR548J-201ENST00000408833 112 ntBASIC1.54□□□□□ -2.16
PRPF40BQ6NWY9 AC140658.3-201ENST00000567603 271 ntBASIC1.54□□□□□ -2.16
PRPF40BQ6NWY9 MIR3064-201ENST00000581130 66 ntBASIC1.54□□□□□ -2.16
PRPF40BQ6NWY9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.54□□□□□ -2.16
PRPF40BQ6NWY9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PRPF40BQ6NWY9 Y_RNA.491-201ENST00000384417 107 ntBASIC1.53□□□□□ -2.16
PRPF40BQ6NWY9 MIR520H-201ENST00000385126 88 ntBASIC1.53□□□□□ -2.16
PRPF40BQ6NWY9 RNA5SP292-201ENST00000390974 118 ntBASIC1.53□□□□□ -2.16
PRPF40BQ6NWY9 SNORD89-201ENST00000390981 114 ntBASIC1.53□□□□□ -2.16
PRPF40BQ6NWY9 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
PRPF40BQ6NWY9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
PRPF40BQ6NWY9 RNU6-132P-201ENST00000383863 107 ntBASIC1.52□□□□□ -2.17
PRPF40BQ6NWY9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PRPF40BQ6NWY9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.52□□□□□ -2.17
PRPF40BQ6NWY9 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
PRPF40BQ6NWY9 FABP5P4-201ENST00000437203 171 ntBASIC1.52□□□□□ -2.17
PRPF40BQ6NWY9 SNORA18.5-201ENST00000516616 101 ntBASIC1.52□□□□□ -2.17
PRPF40BQ6NWY9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.52□□□□□ -2.17
PRPF40BQ6NWY9 RNA5SP245-201ENST00000364239 121 ntBASIC1.51□□□□□ -2.17
PRPF40BQ6NWY9 RNU6-279P-201ENST00000391297 101 ntBASIC1.51□□□□□ -2.17
PRPF40BQ6NWY9 AL606490.4-201ENST00000423117 127 ntBASIC1.51□□□□□ -2.17
PRPF40BQ6NWY9 AC019288.1-201ENST00000557918 224 ntBASIC1.51□□□□□ -2.17
PRPF40BQ6NWY9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
PRPF40BQ6NWY9 Y_RNA.174-201ENST00000363781 105 ntBASIC1.5□□□□□ -2.17
PRPF40BQ6NWY9 Y_RNA.221-201ENST00000364248 96 ntBASIC1.5□□□□□ -2.17
PRPF40BQ6NWY9 Y_RNA.239-201ENST00000364444 113 ntBASIC1.5□□□□□ -2.17
PRPF40BQ6NWY9 SNORA25.8-201ENST00000364831 128 ntBASIC1.5□□□□□ -2.17
PRPF40BQ6NWY9 MIR942-201ENST00000401111 86 ntBASIC1.5□□□□□ -2.17
PRPF40BQ6NWY9 RNU6-857P-201ENST00000515893 110 ntBASIC1.5□□□□□ -2.17
PRPF40BQ6NWY9 Y_RNA.32-201ENST00000362589 110 ntBASIC1.49□□□□□ -2.17
PRPF40BQ6NWY9 SNORD101-201ENST00000384027 73 ntBASIC1.49□□□□□ -2.17
PRPF40BQ6NWY9 MIR19B1-201ENST00000384829 87 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 272.2 ms