Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.47□□□□□ -2.48
SRP54P61011 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.47□□□□□ -2.48
SRP54P61011 MIR3163-201ENST00000581592 73 ntBASIC-0.47□□□□□ -2.48
SRP54P61011 AP001180.6-201ENST00000584918 159 ntBASIC-0.47□□□□□ -2.48
SRP54P61011 RNU6-682P-201ENST00000363843 106 ntBASIC-0.48□□□□□ -2.49
SRP54P61011 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.48□□□□□ -2.49
SRP54P61011 MIR539-201ENST00000365690 78 ntBASIC-0.48□□□□□ -2.49
SRP54P61011 RNU6-196P-201ENST00000384315 107 ntBASIC-0.48□□□□□ -2.49
SRP54P61011 MT-TY-201ENST00000387409 66 ntBASIC-0.48□□□□□ -2.49
SRP54P61011 AL353813.1-201ENST00000440700 253 ntBASIC-0.48□□□□□ -2.49
SRP54P61011 RNU6-861P-201ENST00000516745 106 ntBASIC-0.48□□□□□ -2.49
SRP54P61011 AP002392.1-201ENST00000537692 208 ntBASIC-0.48□□□□□ -2.49
SRP54P61011 MIR4460-201ENST00000577862 86 ntBASIC-0.48□□□□□ -2.49
SRP54P61011 MIR4788-201ENST00000639104 80 ntBASIC-0.48□□□□□ -2.49
SRP54P61011 SNORD114-11-201ENST00000363738 75 ntBASIC-0.49□□□□□ -2.49
SRP54P61011 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.49□□□□□ -2.49
SRP54P61011 RNU6-915P-201ENST00000364943 103 ntBASIC-0.49□□□□□ -2.49
SRP54P61011 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.49□□□□□ -2.49
SRP54P61011 SNORD38.2-201ENST00000384470 69 ntBASIC-0.49□□□□□ -2.49
SRP54P61011 MIR196A2-201ENST00000385189 110 ntBASIC-0.49□□□□□ -2.49
SRP54P61011 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
SRP54P61011 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.49□□□□□ -2.49
SRP54P61011 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 SNORD14C-201ENST00000365382 88 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 RNU6-154P-201ENST00000384306 106 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 RNU7-120P-201ENST00000459334 63 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 RN7SKP19-201ENST00000516016 252 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 MIR4493-201ENST00000584016 73 ntBASIC-0.5□□□□□ -2.49
SRP54P61011 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.51□□□□□ -2.49
SRP54P61011 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.51□□□□□ -2.49
SRP54P61011 SNORD114-29-201ENST00000364819 70 ntBASIC-0.51□□□□□ -2.49
SRP54P61011 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.51□□□□□ -2.49
SRP54P61011 SNORA32.3-201ENST00000384772 121 ntBASIC-0.51□□□□□ -2.49
SRP54P61011 RNU6-243P-201ENST00000391140 107 ntBASIC-0.51□□□□□ -2.49
SRP54P61011 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.51□□□□□ -2.49
SRP54P61011 SNORA7.5-201ENST00000410672 110 ntBASIC-0.51□□□□□ -2.49
SRP54P61011 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.51□□□□□ -2.49
SRP54P61011 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.51□□□□□ -2.49
SRP54P61011 RNU6-957P-201ENST00000363652 99 ntBASIC-0.52□□□□□ -2.49
SRP54P61011 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.52□□□□□ -2.49
SRP54P61011 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.52□□□□□ -2.49
SRP54P61011 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.52□□□□□ -2.49
SRP54P61011 MIR1265-201ENST00000408444 86 ntBASIC-0.52□□□□□ -2.49
SRP54P61011 AC074198.2-201ENST00000508153 258 ntBASIC-0.52□□□□□ -2.49
SRP54P61011 MIR4263-201ENST00000584745 83 ntBASIC-0.52□□□□□ -2.49
SRP54P61011 RNU6-363P-201ENST00000362895 105 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 RNU6-151P-201ENST00000364158 107 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 MIR548G-201ENST00000408442 89 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 SPINT5P-201ENST00000448174 155 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 AC007012.1-201ENST00000567192 175 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.53□□□□□ -2.49
SRP54P61011 MIR548D2-201ENST00000384955 97 ntBASIC-0.54□□□□□ -2.5
SRP54P61011 MIR1263-201ENST00000408324 86 ntBASIC-0.54□□□□□ -2.5
SRP54P61011 RNA5SP136-201ENST00000410906 107 ntBASIC-0.54□□□□□ -2.5
SRP54P61011 SNORD38.1-201ENST00000363863 68 ntBASIC-0.55□□□□□ -2.5
SRP54P61011 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.55□□□□□ -2.5
SRP54P61011 RNU6-463P-201ENST00000384340 107 ntBASIC-0.55□□□□□ -2.5
SRP54P61011 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.55□□□□□ -2.5
SRP54P61011 RNU6-90P-201ENST00000606352 106 ntBASIC-0.55□□□□□ -2.5
SRP54P61011 AP001340.1-201ENST00000624405 217 ntBASIC-0.55□□□□□ -2.5
SRP54P61011 AL512310.12-203ENST00000640543 90 ntBASIC-0.55□□□□□ -2.5
SRP54P61011 MIR101-1-201ENST00000362265 75 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 RNU6-379P-201ENST00000363813 104 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 RNU6-647P-201ENST00000364243 107 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 RNU6-200P-201ENST00000364743 107 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 MIR652-201ENST00000385278 98 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 RNU6-284P-201ENST00000411105 106 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 RNU6-138P-201ENST00000515952 107 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 RNU6-781P-201ENST00000516377 101 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 MIR4432-201ENST00000581823 84 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 uc_338.36-201ENST00000622331 158 ntBASIC-0.56□□□□□ -2.5
SRP54P61011 RNU6-235P-201ENST00000362644 107 ntBASIC-0.57□□□□□ -2.5
SRP54P61011 RNU6-455P-201ENST00000384681 107 ntBASIC-0.57□□□□□ -2.5
SRP54P61011 MIR9-2-201ENST00000384838 87 ntBASIC-0.57□□□□□ -2.5
SRP54P61011 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
SRP54P61011 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.57□□□□□ -2.5
SRP54P61011 Z95118.1-201ENST00000421372 247 ntBASIC-0.57□□□□□ -2.5
SRP54P61011 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.57□□□□□ -2.5
SRP54P61011 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.57□□□□□ -2.5
SRP54P61011 MIR4696-201ENST00000581431 70 ntBASIC-0.57□□□□□ -2.5
SRP54P61011 MIR548AZ-201ENST00000616567 95 ntBASIC-0.57□□□□□ -2.5
SRP54P61011 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
SRP54P61011 MIR20A-201ENST00000362279 71 ntBASIC-0.58□□□□□ -2.5
SRP54P61011 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.58□□□□□ -2.5
SRP54P61011 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.58□□□□□ -2.5
SRP54P61011 MIR759-201ENST00000390224 91 ntBASIC-0.58□□□□□ -2.5
SRP54P61011 RNA5SP451-201ENST00000410588 110 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 229.6 ms