Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 U6.104-201ENST00000637979 90 ntBASIC-1.21□□□□□ -2.6
CLDN18P56856 SNORD36A-201ENST00000362874 73 ntBASIC-1.22□□□□□ -2.6
CLDN18P56856 MIR548E-201ENST00000408287 88 ntBASIC-1.22□□□□□ -2.6
CLDN18P56856 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.22□□□□□ -2.6
CLDN18P56856 MIR582-201ENST00000365731 98 ntBASIC-1.23□□□□□ -2.61
CLDN18P56856 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.23□□□□□ -2.61
CLDN18P56856 MIR4499-201ENST00000584834 69 ntBASIC-1.23□□□□□ -2.61
CLDN18P56856 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.24□□□□□ -2.61
CLDN18P56856 SNORD18B-201ENST00000365659 72 ntBASIC-1.24□□□□□ -2.61
CLDN18P56856 MIR147A-201ENST00000385079 72 ntBASIC-1.24□□□□□ -2.61
CLDN18P56856 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.24□□□□□ -2.61
CLDN18P56856 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.24□□□□□ -2.61
CLDN18P56856 AC140658.3-201ENST00000567603 271 ntBASIC-1.24□□□□□ -2.61
CLDN18P56856 MIR8068-201ENST00000618032 68 ntBASIC-1.24□□□□□ -2.61
CLDN18P56856 MIR4320-201ENST00000636981 65 ntBASIC-1.24□□□□□ -2.61
CLDN18P56856 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.25□□□□□ -2.61
CLDN18P56856 RNU6-431P-201ENST00000383874 107 ntBASIC-1.25□□□□□ -2.61
CLDN18P56856 MIR1302-6-201ENST00000408466 90 ntBASIC-1.25□□□□□ -2.61
CLDN18P56856 RNU6-274P-201ENST00000459566 107 ntBASIC-1.25□□□□□ -2.61
CLDN18P56856 RNA5SP470-201ENST00000516463 106 ntBASIC-1.25□□□□□ -2.61
CLDN18P56856 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.25□□□□□ -2.61
CLDN18P56856 MIR548S-201ENST00000581352 82 ntBASIC-1.25□□□□□ -2.61
CLDN18P56856 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.25□□□□□ -2.61
CLDN18P56856 SNORD114-4-201ENST00000363962 75 ntBASIC-1.26□□□□□ -2.61
CLDN18P56856 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.26□□□□□ -2.61
CLDN18P56856 RNU6-275P-201ENST00000364910 107 ntBASIC-1.26□□□□□ -2.61
CLDN18P56856 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.26□□□□□ -2.61
CLDN18P56856 SNORD64-201ENST00000386683 67 ntBASIC-1.26□□□□□ -2.61
CLDN18P56856 AL353813.1-201ENST00000440700 253 ntBASIC-1.26□□□□□ -2.61
CLDN18P56856 MTND1P19-201ENST00000511780 315 ntBASIC-1.26□□□□□ -2.61
CLDN18P56856 AC134503.1-201ENST00000633048 54 ntBASIC-1.26□□□□□ -2.61
CLDN18P56856 RNU6-957P-201ENST00000363652 99 ntBASIC-1.27□□□□□ -2.61
CLDN18P56856 SNORD101-201ENST00000384027 73 ntBASIC-1.27□□□□□ -2.61
CLDN18P56856 RNU6-768P-201ENST00000384683 107 ntBASIC-1.27□□□□□ -2.61
CLDN18P56856 RNU6-592P-201ENST00000411333 103 ntBASIC-1.27□□□□□ -2.61
CLDN18P56856 AC097510.1-201ENST00000510945 133 ntBASIC-1.27□□□□□ -2.61
CLDN18P56856 MIR4643-201ENST00000577473 78 ntBASIC-1.27□□□□□ -2.61
CLDN18P56856 MIR378F-201ENST00000578143 78 ntBASIC-1.27□□□□□ -2.61
CLDN18P56856 snoR1.1-201ENST00000628177 80 ntBASIC-1.27□□□□□ -2.61
CLDN18P56856 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.28□□□□□ -2.61
CLDN18P56856 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.28□□□□□ -2.61
CLDN18P56856 RNU6-905P-201ENST00000384434 107 ntBASIC-1.28□□□□□ -2.61
CLDN18P56856 SCARNA18B-201ENST00000458806 135 ntBASIC-1.28□□□□□ -2.61
CLDN18P56856 MIR4696-201ENST00000581431 70 ntBASIC-1.28□□□□□ -2.61
CLDN18P56856 AL160413.1-201ENST00000622780 310 ntBASIC-1.28□□□□□ -2.61
CLDN18P56856 RNU6-664P-201ENST00000362381 107 ntBASIC-1.29□□□□□ -2.62
CLDN18P56856 RNU6-235P-201ENST00000362644 107 ntBASIC-1.29□□□□□ -2.62
CLDN18P56856 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.29□□□□□ -2.62
CLDN18P56856 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.29□□□□□ -2.62
CLDN18P56856 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.29□□□□□ -2.62
CLDN18P56856 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.29□□□□□ -2.62
CLDN18P56856 MIR548P-201ENST00000408336 84 ntBASIC-1.29□□□□□ -2.62
CLDN18P56856 MIR382-201ENST00000637119 76 ntBASIC-1.29□□□□□ -2.62
CLDN18P56856 RNU6-54P-201ENST00000365563 107 ntBASIC-1.3□□□□□ -2.62
CLDN18P56856 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.3□□□□□ -2.62
CLDN18P56856 RNU6-24P-201ENST00000384440 107 ntBASIC-1.3□□□□□ -2.62
CLDN18P56856 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.3□□□□□ -2.62
CLDN18P56856 RNU6-935P-201ENST00000410371 100 ntBASIC-1.3□□□□□ -2.62
CLDN18P56856 SNORD18.2-201ENST00000459604 70 ntBASIC-1.3□□□□□ -2.62
CLDN18P56856 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.3□□□□□ -2.62
CLDN18P56856 RNY4P20-201ENST00000516678 93 ntBASIC-1.3□□□□□ -2.62
CLDN18P56856 RNU7-6P-201ENST00000516845 62 ntBASIC-1.3□□□□□ -2.62
CLDN18P56856 RNU6-762P-201ENST00000517107 102 ntBASIC-1.3□□□□□ -2.62
CLDN18P56856 MTND4P29-201ENST00000503122 1372 ntBASIC-1.31□□□□□ -2.62
CLDN18P56856 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.31□□□□□ -2.62
CLDN18P56856 SNORD115-23-201ENST00000364461 82 ntBASIC-1.31□□□□□ -2.62
CLDN18P56856 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.31□□□□□ -2.62
CLDN18P56856 RNU6-985P-201ENST00000410182 104 ntBASIC-1.31□□□□□ -2.62
CLDN18P56856 MIR1468-201ENST00000410600 86 ntBASIC-1.31□□□□□ -2.62
CLDN18P56856 RNU6-521P-201ENST00000516663 105 ntBASIC-1.31□□□□□ -2.62
CLDN18P56856 MIR6773-201ENST00000612812 74 ntBASIC-1.31□□□□□ -2.62
CLDN18P56856 MIR6844-201ENST00000637122 62 ntBASIC-1.31□□□□□ -2.62
CLDN18P56856 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.32□□□□□ -2.62
CLDN18P56856 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.32□□□□□ -2.62
CLDN18P56856 RNU6-466P-201ENST00000391224 103 ntBASIC-1.32□□□□□ -2.62
CLDN18P56856 SNORA75.5-201ENST00000391291 81 ntBASIC-1.32□□□□□ -2.62
CLDN18P56856 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.32□□□□□ -2.62
CLDN18P56856 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.32□□□□□ -2.62
CLDN18P56856 AL137067.1-201ENST00000615933 120 ntBASIC-1.32□□□□□ -2.62
CLDN18P56856 U6.106-201ENST00000636360 105 ntBASIC-1.32□□□□□ -2.62
CLDN18P56856 SNORD115-19-201ENST00000363098 82 ntBASIC-1.33□□□□□ -2.62
CLDN18P56856 SNORD115-18-201ENST00000363293 82 ntBASIC-1.33□□□□□ -2.62
CLDN18P56856 RNA5SP192-201ENST00000364404 120 ntBASIC-1.33□□□□□ -2.62
CLDN18P56856 SNORD115-17-201ENST00000364612 82 ntBASIC-1.33□□□□□ -2.62
CLDN18P56856 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.33□□□□□ -2.62
CLDN18P56856 MIR601-201ENST00000385256 79 ntBASIC-1.33□□□□□ -2.62
CLDN18P56856 U3.27-201ENST00000391237 200 ntBASIC-1.33□□□□□ -2.62
CLDN18P56856 RN7SKP19-201ENST00000516016 252 ntBASIC-1.33□□□□□ -2.62
CLDN18P56856 snoU83B.1-201ENST00000517136 88 ntBASIC-1.33□□□□□ -2.62
CLDN18P56856 MIR3171-201ENST00000584270 74 ntBASIC-1.33□□□□□ -2.62
CLDN18P56856 RNU6-238P-201ENST00000363313 106 ntBASIC-1.34□□□□□ -2.62
CLDN18P56856 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.34□□□□□ -2.62
CLDN18P56856 MIRLET7B-201ENST00000385140 83 ntBASIC-1.34□□□□□ -2.62
CLDN18P56856 RNU6-588P-201ENST00000410281 105 ntBASIC-1.34□□□□□ -2.62
CLDN18P56856 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.34□□□□□ -2.62
CLDN18P56856 MIR3165-201ENST00000579874 75 ntBASIC-1.34□□□□□ -2.62
CLDN18P56856 MIR198-201ENST00000637333 62 ntBASIC-1.34□□□□□ -2.62
CLDN18P56856 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.35□□□□□ -2.63
CLDN18P56856 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.35□□□□□ -2.63
CLDN18P56856 MT-TW-201ENST00000387382 68 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms