Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 RNA5SP320-201ENST00000516263 124 ntBASIC2.63□□□□□ -1.99
PSEN1P49768 SNORA44.1-201ENST00000517031 108 ntBASIC2.63□□□□□ -1.99
PSEN1P49768 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PSEN1P49768 RNU6-369P-201ENST00000362515 102 ntBASIC2.62□□□□□ -1.99
PSEN1P49768 RNU4-52P-201ENST00000384209 138 ntBASIC2.62□□□□□ -1.99
PSEN1P49768 RNU6-301P-201ENST00000384277 107 ntBASIC2.62□□□□□ -1.99
PSEN1P49768 RNU7-104P-201ENST00000459398 79 ntBASIC2.62□□□□□ -1.99
PSEN1P49768 MIR4299-201ENST00000577899 72 ntBASIC2.62□□□□□ -1.99
PSEN1P49768 MIR7978-201ENST00000636158 59 ntBASIC2.62□□□□□ -1.99
PSEN1P49768 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PSEN1P49768 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PSEN1P49768 MIR519E-201ENST00000385075 84 ntBASIC2.61□□□□□ -1.99
PSEN1P49768 RNU6-994P-201ENST00000410507 111 ntBASIC2.61□□□□□ -1.99
PSEN1P49768 AL591704.2-201ENST00000421658 181 ntBASIC2.61□□□□□ -1.99
PSEN1P49768 SNORA31.2-201ENST00000516019 134 ntBASIC2.61□□□□□ -1.99
PSEN1P49768 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PSEN1P49768 SNORA2.1-201ENST00000363089 137 ntBASIC2.6□□□□□ -1.99
PSEN1P49768 RPL23AP94-201ENST00000512518 302 ntBASIC2.59□□□□□ -1.99
PSEN1P49768 RNA5SP24-201ENST00000516478 95 ntBASIC2.59□□□□□ -1.99
PSEN1P49768 RNU6-122P-201ENST00000516818 107 ntBASIC2.59□□□□□ -1.99
PSEN1P49768 MIR3938-201ENST00000582157 103 ntBASIC2.59□□□□□ -1.99
PSEN1P49768 AL157834.3-201ENST00000615543 103 ntBASIC2.59□□□□□ -1.99
PSEN1P49768 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PSEN1P49768 Y_RNA.363-201ENST00000365529 113 ntBASIC2.58□□□□□ -2
PSEN1P49768 MIR17-201ENST00000385012 84 ntBASIC2.58□□□□□ -2
PSEN1P49768 MIR100-201ENST00000385259 80 ntBASIC2.58□□□□□ -2
PSEN1P49768 RN7SKP88-201ENST00000516847 250 ntBASIC2.58□□□□□ -2
PSEN1P49768 MIR4435-1-201ENST00000582552 80 ntBASIC2.58□□□□□ -2
PSEN1P49768 7SK.8-201ENST00000612110 250 ntBASIC2.58□□□□□ -2
PSEN1P49768 7SK.11-201ENST00000615477 250 ntBASIC2.58□□□□□ -2
PSEN1P49768 7SK.13-201ENST00000622040 250 ntBASIC2.58□□□□□ -2
PSEN1P49768 AC067863.3-201ENST00000624172 122 ntBASIC2.58□□□□□ -2
PSEN1P49768 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
PSEN1P49768 RNU6-302P-201ENST00000365249 107 ntBASIC2.57□□□□□ -2
PSEN1P49768 RNU6V-201ENST00000384105 107 ntBASIC2.57□□□□□ -2
PSEN1P49768 SUMO2P12-201ENST00000405924 140 ntBASIC2.57□□□□□ -2
PSEN1P49768 SNORD42B-201ENST00000458893 67 ntBASIC2.57□□□□□ -2
PSEN1P49768 RNU7-21P-201ENST00000459430 62 ntBASIC2.57□□□□□ -2
PSEN1P49768 SNORA11.2-201ENST00000408318 127 ntBASIC2.56□□□□□ -2
PSEN1P49768 RNU6-1089P-201ENST00000516473 104 ntBASIC2.56□□□□□ -2
PSEN1P49768 RNU6-656P-201ENST00000516785 107 ntBASIC2.56□□□□□ -2
PSEN1P49768 RNU6-92P-201ENST00000605893 104 ntBASIC2.56□□□□□ -2
PSEN1P49768 MIR1-1-201ENST00000362147 71 ntBASIC2.55□□□□□ -2
PSEN1P49768 RNU6-936P-201ENST00000384005 107 ntBASIC2.55□□□□□ -2
PSEN1P49768 AC008413.1-201ENST00000511864 177 ntBASIC2.55□□□□□ -2
PSEN1P49768 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.55□□□□□ -2
PSEN1P49768 SNORA80D-201ENST00000384488 135 ntBASIC2.54□□□□□ -2
PSEN1P49768 MIR934-201ENST00000401241 83 ntBASIC2.54□□□□□ -2
PSEN1P49768 AL356379.1-201ENST00000414105 126 ntBASIC2.54□□□□□ -2
PSEN1P49768 RNU1-123P-201ENST00000458950 160 ntBASIC2.54□□□□□ -2
PSEN1P49768 RNU7-74P-201ENST00000459104 62 ntBASIC2.54□□□□□ -2
PSEN1P49768 MIR6739-201ENST00000622461 75 ntBASIC2.54□□□□□ -2
PSEN1P49768 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
PSEN1P49768 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
PSEN1P49768 AC080100.1-201ENST00000624239 5356 ntBASIC2.53□□□□□ -2
PSEN1P49768 MIR520F-201ENST00000384824 87 ntBASIC2.53□□□□□ -2
PSEN1P49768 RNU7-90P-201ENST00000459216 62 ntBASIC2.53□□□□□ -2
PSEN1P49768 ZNF355P-201ENST00000427301 3216 ntBASIC2.53□□□□□ -2.01
PSEN1P49768 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
PSEN1P49768 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.52□□□□□ -2.01
PSEN1P49768 RNA5SP147-201ENST00000516493 109 ntBASIC2.52□□□□□ -2.01
PSEN1P49768 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
PSEN1P49768 SNORD114-30-201ENST00000364448 72 ntBASIC2.51□□□□□ -2.01
PSEN1P49768 RNA5SP117-201ENST00000365294 118 ntBASIC2.51□□□□□ -2.01
PSEN1P49768 RNA5SP508-201ENST00000411327 119 ntBASIC2.51□□□□□ -2.01
PSEN1P49768 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PSEN1P49768 AL356320.1-201ENST00000429616 163 ntBASIC2.5□□□□□ -2.01
PSEN1P49768 AC026436.1-201ENST00000510537 270 ntBASIC2.5□□□□□ -2.01
PSEN1P49768 SNORD113-4-201ENST00000364802 75 ntBASIC2.49□□□□□ -2.01
PSEN1P49768 RNU6-1184P-201ENST00000384588 108 ntBASIC2.49□□□□□ -2.01
PSEN1P49768 SNORA40.17-201ENST00000517256 115 ntBASIC2.49□□□□□ -2.01
PSEN1P49768 uc_338.20-201ENST00000621563 178 ntBASIC2.49□□□□□ -2.01
PSEN1P49768 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PSEN1P49768 RNU6-990P-201ENST00000364385 104 ntBASIC2.48□□□□□ -2.01
PSEN1P49768 RNU4-53P-201ENST00000410828 140 ntBASIC2.48□□□□□ -2.01
PSEN1P49768 MIR548V-201ENST00000584165 80 ntBASIC2.48□□□□□ -2.01
PSEN1P49768 AL136317.1-201ENST00000612653 226 ntBASIC2.48□□□□□ -2.01
PSEN1P49768 RNA5SP289-201ENST00000362332 137 ntBASIC2.47□□□□□ -2.01
PSEN1P49768 MT-TY-201ENST00000387409 66 ntBASIC2.47□□□□□ -2.01
PSEN1P49768 RNU6-910P-201ENST00000390844 107 ntBASIC2.47□□□□□ -2.01
PSEN1P49768 RNA5SP338-201ENST00000410495 85 ntBASIC2.47□□□□□ -2.01
PSEN1P49768 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.47□□□□□ -2.01
PSEN1P49768 RN7SL429P-201ENST00000479090 223 ntBASIC2.47□□□□□ -2.01
PSEN1P49768 RN7SL489P-201ENST00000486185 223 ntBASIC2.47□□□□□ -2.01
PSEN1P49768 RN7SL327P-201ENST00000488659 223 ntBASIC2.47□□□□□ -2.01
PSEN1P49768 MIR3945-201ENST00000581853 98 ntBASIC2.47□□□□□ -2.01
PSEN1P49768 MIR5007-201ENST00000583098 95 ntBASIC2.47□□□□□ -2.01
PSEN1P49768 RN7SL853P-201ENST00000617250 223 ntBASIC2.47□□□□□ -2.01
PSEN1P49768 SNORD60.1-201ENST00000362451 73 ntBASIC2.46□□□□□ -2.02
PSEN1P49768 Y_RNA.250-201ENST00000364542 110 ntBASIC2.46□□□□□ -2.02
PSEN1P49768 AL096840.1-201ENST00000603287 93 ntBASIC2.46□□□□□ -2.02
PSEN1P49768 AC046143.2-201ENST00000609789 160 ntBASIC2.46□□□□□ -2.02
PSEN1P49768 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
PSEN1P49768 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PSEN1P49768 MIR221-201ENST00000385135 110 ntBASIC2.45□□□□□ -2.02
PSEN1P49768 RNU1-78P-201ENST00000391248 165 ntBASIC2.45□□□□□ -2.02
PSEN1P49768 AC025033.1-201ENST00000463883 194 ntBASIC2.45□□□□□ -2.02
PSEN1P49768 RNU6-135P-201ENST00000516769 101 ntBASIC2.45□□□□□ -2.02
PSEN1P49768 AC018659.1-201ENST00000551083 169 ntBASIC2.45□□□□□ -2.02
PSEN1P49768 MIR3198-2-201ENST00000577868 80 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 236.2 ms