Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC025521.1-201ENST00000621624 286 ntBASIC0.57□□□□□ -2.32
SHC1P29353 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.57□□□□□ -2.32
SHC1P29353 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SHC1P29353 RNU6-1125P-201ENST00000363601 107 ntBASIC0.56□□□□□ -2.32
SHC1P29353 Y_RNA.174-201ENST00000363781 105 ntBASIC0.56□□□□□ -2.32
SHC1P29353 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
SHC1P29353 RNU6-480P-201ENST00000384332 107 ntBASIC0.56□□□□□ -2.32
SHC1P29353 RNU6-1254P-201ENST00000391266 104 ntBASIC0.56□□□□□ -2.32
SHC1P29353 RNA5SP222-201ENST00000411039 105 ntBASIC0.56□□□□□ -2.32
SHC1P29353 RNU6-162P-201ENST00000516228 103 ntBASIC0.56□□□□□ -2.32
SHC1P29353 AC138869.1-201ENST00000568623 124 ntBASIC0.56□□□□□ -2.32
SHC1P29353 AL513043.2-201ENST00000573941 143 ntBASIC0.56□□□□□ -2.32
SHC1P29353 Y_RNA.190-201ENST00000363964 101 ntBASIC0.55□□□□□ -2.32
SHC1P29353 MIR519A1-201ENST00000385257 85 ntBASIC0.55□□□□□ -2.32
SHC1P29353 AC244505.6-201ENST00000452829 130 ntBASIC0.55□□□□□ -2.32
SHC1P29353 RNA5SP436-201ENST00000516020 115 ntBASIC0.55□□□□□ -2.32
SHC1P29353 Y_RNA.809-201ENST00000516058 95 ntBASIC0.55□□□□□ -2.32
SHC1P29353 SNORA40.13-201ENST00000516379 120 ntBASIC0.55□□□□□ -2.32
SHC1P29353 Y_RNA.677-201ENST00000516401 85 ntBASIC0.55□□□□□ -2.32
SHC1P29353 RNU6-158P-201ENST00000517104 100 ntBASIC0.55□□□□□ -2.32
SHC1P29353 RNU7-10P-201ENST00000607194 63 ntBASIC0.55□□□□□ -2.32
SHC1P29353 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.55□□□□□ -2.32
SHC1P29353 SNORD18A-201ENST00000363753 72 ntBASIC0.54□□□□□ -2.32
SHC1P29353 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
SHC1P29353 Y_RNA.221-201ENST00000364248 96 ntBASIC0.54□□□□□ -2.32
SHC1P29353 Y_RNA.290-201ENST00000364879 114 ntBASIC0.54□□□□□ -2.32
SHC1P29353 MIR488-201ENST00000365739 83 ntBASIC0.54□□□□□ -2.32
SHC1P29353 SNORD58A-201ENST00000383875 65 ntBASIC0.54□□□□□ -2.32
SHC1P29353 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
SHC1P29353 AL161932.1-201ENST00000437408 146 ntBASIC0.54□□□□□ -2.32
SHC1P29353 Y_RNA.705-201ENST00000516862 110 ntBASIC0.54□□□□□ -2.32
SHC1P29353 U7.3-201ENST00000616123 62 ntBASIC0.54□□□□□ -2.32
SHC1P29353 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.32
SHC1P29353 MIR599-201ENST00000385069 95 ntBASIC0.53□□□□□ -2.32
SHC1P29353 RNU6-243P-201ENST00000391140 107 ntBASIC0.53□□□□□ -2.32
SHC1P29353 RNU6-972P-201ENST00000391208 107 ntBASIC0.53□□□□□ -2.32
SHC1P29353 RNU6-887P-201ENST00000410660 100 ntBASIC0.53□□□□□ -2.32
SHC1P29353 RNU7-161P-201ENST00000517289 62 ntBASIC0.53□□□□□ -2.32
SHC1P29353 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SHC1P29353 RNU6-1260P-201ENST00000362944 107 ntBASIC0.52□□□□□ -2.33
SHC1P29353 SNORD115-24-201ENST00000363528 82 ntBASIC0.52□□□□□ -2.33
SHC1P29353 RNU6-957P-201ENST00000363652 99 ntBASIC0.52□□□□□ -2.33
SHC1P29353 RNU6-524P-201ENST00000384270 107 ntBASIC0.52□□□□□ -2.33
SHC1P29353 SNORD28-201ENST00000384706 75 ntBASIC0.52□□□□□ -2.33
SHC1P29353 MIR598-201ENST00000384868 97 ntBASIC0.52□□□□□ -2.33
SHC1P29353 AC097635.1-201ENST00000450678 155 ntBASIC0.52□□□□□ -2.33
SHC1P29353 snoU13.11-201ENST00000459219 104 ntBASIC0.52□□□□□ -2.33
SHC1P29353 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.52□□□□□ -2.33
SHC1P29353 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.52□□□□□ -2.33
SHC1P29353 AC244669.1-204ENST00000621564 178 ntBASIC0.52□□□□□ -2.33
SHC1P29353 MIR2052-201ENST00000636055 55 ntBASIC0.52□□□□□ -2.33
SHC1P29353 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.52□□□□□ -2.33
SHC1P29353 SNORA36.1-201ENST00000363424 132 ntBASIC0.51□□□□□ -2.33
SHC1P29353 SNORA36.2-201ENST00000384004 127 ntBASIC0.51□□□□□ -2.33
SHC1P29353 MTATP6P29-201ENST00000415057 132 ntBASIC0.51□□□□□ -2.33
SHC1P29353 RNA5SP47-201ENST00000517230 109 ntBASIC0.51□□□□□ -2.33
SHC1P29353 MIR6513-201ENST00000621188 64 ntBASIC0.51□□□□□ -2.33
SHC1P29353 RNU6-1298P-201ENST00000362456 101 ntBASIC0.5□□□□□ -2.33
SHC1P29353 RNA5SP403-201ENST00000363598 108 ntBASIC0.5□□□□□ -2.33
SHC1P29353 RNY1P7-201ENST00000384743 110 ntBASIC0.5□□□□□ -2.33
SHC1P29353 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
SHC1P29353 RNU7-85P-201ENST00000458851 63 ntBASIC0.5□□□□□ -2.33
SHC1P29353 RNU6-469P-201ENST00000516253 101 ntBASIC0.5□□□□□ -2.33
SHC1P29353 RNA5SP94-201ENST00000516917 108 ntBASIC0.5□□□□□ -2.33
SHC1P29353 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.5□□□□□ -2.33
SHC1P29353 MALAT1.1-201ENST00000618249 95 ntBASIC0.5□□□□□ -2.33
SHC1P29353 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
SHC1P29353 PVT1_3.1-201ENST00000620853 95 ntBASIC0.5□□□□□ -2.33
SHC1P29353 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
SHC1P29353 RNU6-49P-201ENST00000384256 107 ntBASIC0.49□□□□□ -2.33
SHC1P29353 RNY4P30-201ENST00000410216 95 ntBASIC0.49□□□□□ -2.33
SHC1P29353 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
SHC1P29353 Y_RNA.648-201ENST00000459455 110 ntBASIC0.49□□□□□ -2.33
SHC1P29353 MIR4639-201ENST00000584938 69 ntBASIC0.49□□□□□ -2.33
SHC1P29353 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
SHC1P29353 Y_RNA.96-201ENST00000363092 109 ntBASIC0.48□□□□□ -2.33
SHC1P29353 RNU4-45P-201ENST00000365469 141 ntBASIC0.48□□□□□ -2.33
SHC1P29353 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.48□□□□□ -2.33
SHC1P29353 SNORD4B-201ENST00000459083 72 ntBASIC0.48□□□□□ -2.33
SHC1P29353 RNU6-75P-201ENST00000515944 104 ntBASIC0.48□□□□□ -2.33
SHC1P29353 RNU6-1265P-201ENST00000516342 103 ntBASIC0.48□□□□□ -2.33
SHC1P29353 AC026421.1-201ENST00000519101 163 ntBASIC0.48□□□□□ -2.33
SHC1P29353 TRDV1-202ENST00000621643 102 ntBASIC0.48□□□□□ -2.33
SHC1P29353 MIR6828-201ENST00000636181 60 ntBASIC0.48□□□□□ -2.33
SHC1P29353 U6.100-201ENST00000636230 99 ntBASIC0.48□□□□□ -2.33
SHC1P29353 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
SHC1P29353 SNORD116-10-201ENST00000363791 102 ntBASIC0.47□□□□□ -2.33
SHC1P29353 RNA5SP517-201ENST00000364724 117 ntBASIC0.47□□□□□ -2.33
SHC1P29353 Y_RNA.283-201ENST00000364798 112 ntBASIC0.47□□□□□ -2.33
SHC1P29353 RNU6-1131P-201ENST00000364955 107 ntBASIC0.47□□□□□ -2.33
SHC1P29353 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
SHC1P29353 RNU7-104P-201ENST00000459398 79 ntBASIC0.47□□□□□ -2.33
SHC1P29353 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
SHC1P29353 RNU6-135P-201ENST00000516769 101 ntBASIC0.47□□□□□ -2.33
SHC1P29353 SCARNA16.5-201ENST00000517114 183 ntBASIC0.47□□□□□ -2.33
SHC1P29353 MIR3920-201ENST00000581751 86 ntBASIC0.47□□□□□ -2.33
SHC1P29353 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SHC1P29353 RNU6-1229P-201ENST00000364295 107 ntBASIC0.46□□□□□ -2.34
SHC1P29353 RNU6-726P-201ENST00000364680 107 ntBASIC0.46□□□□□ -2.34
SHC1P29353 MIR936-201ENST00000401264 98 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 256.3 ms