Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.07□□□□□ -2.42
PTPN4P29074 RNU6-652P-201ENST00000365488 107 ntBASIC-0.07□□□□□ -2.42
PTPN4P29074 RNU6V-201ENST00000384105 107 ntBASIC-0.07□□□□□ -2.42
PTPN4P29074 RNA5SP484-201ENST00000458857 111 ntBASIC-0.07□□□□□ -2.42
PTPN4P29074 IGLVI-20-201ENST00000519296 130 ntBASIC-0.07□□□□□ -2.42
PTPN4P29074 NAMPTP3-201ENST00000569273 224 ntBASIC-0.07□□□□□ -2.42
PTPN4P29074 MIR4677-201ENST00000584153 80 ntBASIC-0.07□□□□□ -2.42
PTPN4P29074 AC025166.1-201ENST00000612411 163 ntBASIC-0.07□□□□□ -2.42
PTPN4P29074 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.07□□□□□ -2.42
PTPN4P29074 SNORD110-201ENST00000408189 75 ntBASIC-0.08□□□□□ -2.42
PTPN4P29074 MIR1265-201ENST00000408444 86 ntBASIC-0.08□□□□□ -2.42
PTPN4P29074 MIR1912-201ENST00000410389 80 ntBASIC-0.08□□□□□ -2.42
PTPN4P29074 AC006210.1-201ENST00000424882 111 ntBASIC-0.08□□□□□ -2.42
PTPN4P29074 RNU7-74P-201ENST00000459104 62 ntBASIC-0.08□□□□□ -2.42
PTPN4P29074 AL512310.12-203ENST00000640543 90 ntBASIC-0.08□□□□□ -2.42
PTPN4P29074 RNA5SP98-201ENST00000363158 137 ntBASIC-0.09□□□□□ -2.42
PTPN4P29074 RNY4P6-201ENST00000363667 96 ntBASIC-0.09□□□□□ -2.42
PTPN4P29074 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.09□□□□□ -2.42
PTPN4P29074 AC104692.1-201ENST00000472406 90 ntBASIC-0.09□□□□□ -2.42
PTPN4P29074 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.09□□□□□ -2.42
PTPN4P29074 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.09□□□□□ -2.42
PTPN4P29074 MIR6086-201ENST00000638065 55 ntBASIC-0.09□□□□□ -2.42
PTPN4P29074 MTND5P18-201ENST00000445624 1801 ntBASIC-0.09□□□□□ -2.42
PTPN4P29074 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 SNORD38.1-201ENST00000363863 68 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 RNU6-409P-201ENST00000384114 104 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 SNORA40-201ENST00000388090 126 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 HMGN2P22-201ENST00000427588 175 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 SPINT5P-201ENST00000448174 155 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 RNU6-255P-201ENST00000516957 105 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 MIR5589-201ENST00000579442 60 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 MIR548AG2-201ENST00000581228 64 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 MIR3925-201ENST00000584674 77 ntBASIC-0.1□□□□□ -2.43
PTPN4P29074 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.1□□□□□ -2.43
PTPN4P29074 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.11□□□□□ -2.43
PTPN4P29074 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.11□□□□□ -2.43
PTPN4P29074 SNORD115-44-201ENST00000365391 82 ntBASIC-0.11□□□□□ -2.43
PTPN4P29074 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.11□□□□□ -2.43
PTPN4P29074 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.11□□□□□ -2.43
PTPN4P29074 MIR548G-201ENST00000408442 89 ntBASIC-0.11□□□□□ -2.43
PTPN4P29074 RNU6-257P-201ENST00000410238 98 ntBASIC-0.11□□□□□ -2.43
PTPN4P29074 RNU6-90P-201ENST00000606352 106 ntBASIC-0.11□□□□□ -2.43
PTPN4P29074 SNORD36A-201ENST00000362874 73 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 SNORD114-31-201ENST00000363219 75 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 RNU1-141P-201ENST00000364623 158 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 RNY1P5-201ENST00000383890 115 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 RNU6-756P-201ENST00000383997 107 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 MIR519E-201ENST00000385075 84 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 RNU6-772P-201ENST00000516042 105 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 MIR4636-201ENST00000582271 80 ntBASIC-0.12□□□□□ -2.43
PTPN4P29074 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 MIR617-201ENST00000385030 97 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 RNU6-816P-201ENST00000390914 107 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 RNU6-243P-201ENST00000391140 107 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 RNA5SP163-201ENST00000410304 99 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 RNU7-159P-201ENST00000459284 62 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 RNU6-346P-201ENST00000516288 111 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 RNA5SP476-201ENST00000516613 103 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 AL162726.3-218ENST00000636401 95 ntBASIC-0.13□□□□□ -2.43
PTPN4P29074 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
PTPN4P29074 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.14□□□□□ -2.43
PTPN4P29074 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.14□□□□□ -2.43
PTPN4P29074 RNU6-929P-201ENST00000384429 107 ntBASIC-0.14□□□□□ -2.43
PTPN4P29074 SNORA75.1-201ENST00000391130 148 ntBASIC-0.14□□□□□ -2.43
PTPN4P29074 AC093423.1-201ENST00000440817 142 ntBASIC-0.14□□□□□ -2.43
PTPN4P29074 RNU7-165P-201ENST00000458864 60 ntBASIC-0.14□□□□□ -2.43
PTPN4P29074 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.14□□□□□ -2.43
PTPN4P29074 SNORA25.13-201ENST00000516395 103 ntBASIC-0.14□□□□□ -2.43
PTPN4P29074 AL442128.1-201ENST00000615151 90 ntBASIC-0.14□□□□□ -2.43
PTPN4P29074 TRDV1-202ENST00000621643 102 ntBASIC-0.14□□□□□ -2.43
PTPN4P29074 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.15□□□□□ -2.43
PTPN4P29074 MIR876-201ENST00000401147 81 ntBASIC-0.15□□□□□ -2.43
PTPN4P29074 Z95118.1-201ENST00000421372 247 ntBASIC-0.15□□□□□ -2.43
PTPN4P29074 MIR2113-201ENST00000459007 91 ntBASIC-0.15□□□□□ -2.43
PTPN4P29074 HAR1A.1-201ENST00000459583 118 ntBASIC-0.15□□□□□ -2.43
PTPN4P29074 RNU6-180P-201ENST00000516697 61 ntBASIC-0.15□□□□□ -2.43
PTPN4P29074 AL157777.2-201ENST00000258070 137 ntBASIC-0.16□□□□□ -2.44
PTPN4P29074 AL161932.1-201ENST00000437408 146 ntBASIC-0.16□□□□□ -2.44
PTPN4P29074 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.16□□□□□ -2.44
PTPN4P29074 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.16□□□□□ -2.44
PTPN4P29074 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.16□□□□□ -2.44
PTPN4P29074 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.17□□□□□ -2.44
PTPN4P29074 MIR539-201ENST00000365690 78 ntBASIC-0.17□□□□□ -2.44
PTPN4P29074 RNU6-287P-201ENST00000516230 98 ntBASIC-0.17□□□□□ -2.44
PTPN4P29074 AC069503.3-201ENST00000618674 145 ntBASIC-0.17□□□□□ -2.44
PTPN4P29074 AC084368.1-201ENST00000620935 65 ntBASIC-0.17□□□□□ -2.44
PTPN4P29074 U6.100-201ENST00000636230 99 ntBASIC-0.17□□□□□ -2.44
PTPN4P29074 SNORA51.5-201ENST00000384126 131 ntBASIC-0.18□□□□□ -2.44
PTPN4P29074 MIR516B1-201ENST00000385211 90 ntBASIC-0.18□□□□□ -2.44
PTPN4P29074 MIR214-201ENST00000385214 110 ntBASIC-0.18□□□□□ -2.44
PTPN4P29074 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms