Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-154P-201ENST00000384306 106 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 MIR548D2-201ENST00000384955 97 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-138P-201ENST00000515952 107 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 AP001328.1-201ENST00000528550 176 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 MIR548AE1-201ENST00000583292 70 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-90P-201ENST00000606352 106 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 U6.100-201ENST00000636230 99 ntBASIC-0.48□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 SNORD114-31-201ENST00000363219 75 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 RNA5SP457-201ENST00000363657 124 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 SNORD38.1-201ENST00000363863 68 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 SNORD116-18-201ENST00000383961 92 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 MT-TY-201ENST00000387409 66 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 MIR548G-201ENST00000408442 89 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-735P-201ENST00000410612 107 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 IGLVI-20-201ENST00000519296 130 ntBASIC-0.49□□□□□ -2.49
IGHV3-43DP0DP04 MIR655-201ENST00000362159 97 ntBASIC-0.5□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-379P-201ENST00000363813 104 ntBASIC-0.5□□□□□ -2.49
IGHV3-43DP0DP04 RNA5SP205-201ENST00000364653 136 ntBASIC-0.5□□□□□ -2.49
IGHV3-43DP0DP04 AC074198.2-201ENST00000508153 258 ntBASIC-0.5□□□□□ -2.49
IGHV3-43DP0DP04 SNORA81.3-201ENST00000517283 198 ntBASIC-0.5□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-363P-201ENST00000362895 105 ntBASIC-0.51□□□□□ -2.49
IGHV3-43DP0DP04 SNORD114-28-201ENST00000363610 72 ntBASIC-0.51□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.51□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.51□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.51□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-388P-201ENST00000517012 105 ntBASIC-0.51□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-389P-201ENST00000517048 105 ntBASIC-0.51□□□□□ -2.49
IGHV3-43DP0DP04 MIR4645-201ENST00000583158 77 ntBASIC-0.51□□□□□ -2.49
IGHV3-43DP0DP04 AP001340.1-201ENST00000624405 217 ntBASIC-0.51□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-957P-201ENST00000363652 99 ntBASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 SNORD14C-201ENST00000365382 88 ntBASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 MIR539-201ENST00000365690 78 ntBASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.52□□□□□ -2.49
IGHV3-43DP0DP04 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-409P-201ENST00000384114 104 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 MIR329-2-201ENST00000385029 84 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-466P-201ENST00000391224 103 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 SNORD126-201ENST00000459475 77 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 RNU6-175P-201ENST00000516896 107 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 MIR548X2-201ENST00000579776 100 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 AC004792.1-201ENST00000614523 137 ntBASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.53□□□□□ -2.49
IGHV3-43DP0DP04 AL353813.1-201ENST00000440700 253 ntBASIC-0.54□□□□□ -2.5
IGHV3-43DP0DP04 AL158147.1-201ENST00000443970 75 ntBASIC-0.54□□□□□ -2.5
IGHV3-43DP0DP04 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.54□□□□□ -2.5
IGHV3-43DP0DP04 U7.2-201ENST00000607576 63 ntBASIC-0.54□□□□□ -2.5
IGHV3-43DP0DP04 MIR548AZ-201ENST00000616567 95 ntBASIC-0.54□□□□□ -2.5
IGHV3-43DP0DP04 MIR20A-201ENST00000362279 71 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 RNA5SP257-201ENST00000363023 116 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 MIR196A2-201ENST00000385189 110 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 RNU6-781P-201ENST00000516377 101 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 AC007012.1-201ENST00000567192 175 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 AL590491.3-201ENST00000610731 82 ntBASIC-0.55□□□□□ -2.5
IGHV3-43DP0DP04 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.56□□□□□ -2.5
IGHV3-43DP0DP04 SNORD101-201ENST00000384027 73 ntBASIC-0.56□□□□□ -2.5
IGHV3-43DP0DP04 RNU6-455P-201ENST00000384681 107 ntBASIC-0.56□□□□□ -2.5
IGHV3-43DP0DP04 SNORA32.3-201ENST00000384772 121 ntBASIC-0.56□□□□□ -2.5
IGHV3-43DP0DP04 MIR7-2-201ENST00000384970 110 ntBASIC-0.56□□□□□ -2.5
IGHV3-43DP0DP04 RNU6-394P-201ENST00000410735 107 ntBASIC-0.56□□□□□ -2.5
IGHV3-43DP0DP04 MIR4719-201ENST00000585233 84 ntBASIC-0.56□□□□□ -2.5
IGHV3-43DP0DP04 RNY4P6-201ENST00000363667 96 ntBASIC-0.57□□□□□ -2.5
IGHV3-43DP0DP04 SNORD114-11-201ENST00000363738 75 ntBASIC-0.57□□□□□ -2.5
IGHV3-43DP0DP04 MIR216B-201ENST00000390186 82 ntBASIC-0.57□□□□□ -2.5
IGHV3-43DP0DP04 AL442128.1-201ENST00000615151 90 ntBASIC-0.57□□□□□ -2.5
IGHV3-43DP0DP04 RNU6-804P-201ENST00000384286 107 ntBASIC-0.58□□□□□ -2.5
IGHV3-43DP0DP04 MIR652-201ENST00000385278 98 ntBASIC-0.58□□□□□ -2.5
IGHV3-43DP0DP04 MT-TG-201ENST00000387429 68 ntBASIC-0.58□□□□□ -2.5
IGHV3-43DP0DP04 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
IGHV3-43DP0DP04 RNU6-816P-201ENST00000390914 107 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms