Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AP001328.1-201ENST00000528550 176 ntBASIC-0.72□□□□□ -2.52
HMGB1P09429 MIR548AG2-201ENST00000581228 64 ntBASIC-0.72□□□□□ -2.52
HMGB1P09429 RNA5SP257-201ENST00000363023 116 ntBASIC-0.73□□□□□ -2.53
HMGB1P09429 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.73□□□□□ -2.53
HMGB1P09429 RNU6-243P-201ENST00000391140 107 ntBASIC-0.73□□□□□ -2.53
HMGB1P09429 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.73□□□□□ -2.53
HMGB1P09429 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.73□□□□□ -2.53
HMGB1P09429 uc_338.10-201ENST00000621872 182 ntBASIC-0.73□□□□□ -2.53
HMGB1P09429 AC099654.10-201ENST00000640395 161 ntBASIC-0.73□□□□□ -2.53
HMGB1P09429 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.74□□□□□ -2.53
HMGB1P09429 AC109327.2-201ENST00000448339 378 ntBASIC-0.74□□□□□ -2.53
HMGB1P09429 SNORA81.3-201ENST00000517283 198 ntBASIC-0.74□□□□□ -2.53
HMGB1P09429 MIR4460-201ENST00000577862 86 ntBASIC-0.74□□□□□ -2.53
HMGB1P09429 AC069503.3-201ENST00000618674 145 ntBASIC-0.74□□□□□ -2.53
HMGB1P09429 RNA5SP136-201ENST00000410906 107 ntBASIC-0.75□□□□□ -2.53
HMGB1P09429 RNU6-284P-201ENST00000411105 106 ntBASIC-0.75□□□□□ -2.53
HMGB1P09429 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.76□□□□□ -2.53
HMGB1P09429 MIR2113-201ENST00000459007 91 ntBASIC-0.76□□□□□ -2.53
HMGB1P09429 AC004792.1-201ENST00000614523 137 ntBASIC-0.76□□□□□ -2.53
HMGB1P09429 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.77□□□□□ -2.53
HMGB1P09429 RNU6-811P-201ENST00000384069 107 ntBASIC-0.78□□□□□ -2.53
HMGB1P09429 SNORA51.5-201ENST00000384126 131 ntBASIC-0.78□□□□□ -2.53
HMGB1P09429 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.78□□□□□ -2.53
HMGB1P09429 RNU7-188P-201ENST00000517063 64 ntBASIC-0.78□□□□□ -2.53
HMGB1P09429 TRDV1-202ENST00000621643 102 ntBASIC-0.78□□□□□ -2.53
HMGB1P09429 MIR7-2-201ENST00000384970 110 ntBASIC-0.79□□□□□ -2.54
HMGB1P09429 RNU6-735P-201ENST00000410612 107 ntBASIC-0.79□□□□□ -2.54
HMGB1P09429 AL161932.1-201ENST00000437408 146 ntBASIC-0.79□□□□□ -2.54
HMGB1P09429 AC114755.3-201ENST00000481111 251 ntBASIC-0.79□□□□□ -2.54
HMGB1P09429 RNU6-287P-201ENST00000516230 98 ntBASIC-0.79□□□□□ -2.54
HMGB1P09429 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.79□□□□□ -2.54
HMGB1P09429 AP001180.6-201ENST00000584918 159 ntBASIC-0.79□□□□□ -2.54
HMGB1P09429 RN7SL660P-201ENST00000614852 299 ntBASIC-0.79□□□□□ -2.54
HMGB1P09429 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.8□□□□□ -2.54
HMGB1P09429 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.8□□□□□ -2.54
HMGB1P09429 MIR548D2-201ENST00000384955 97 ntBASIC-0.8□□□□□ -2.54
HMGB1P09429 MIR181B2-201ENST00000385004 89 ntBASIC-0.8□□□□□ -2.54
HMGB1P09429 AC244250.2-201ENST00000418731 148 ntBASIC-0.8□□□□□ -2.54
HMGB1P09429 RNU6-90P-201ENST00000606352 106 ntBASIC-0.8□□□□□ -2.54
HMGB1P09429 RNU6-480P-201ENST00000384332 107 ntBASIC-0.81□□□□□ -2.54
HMGB1P09429 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.81□□□□□ -2.54
HMGB1P09429 MIR548X2-201ENST00000579776 100 ntBASIC-0.81□□□□□ -2.54
HMGB1P09429 MIR6759-201ENST00000638110 65 ntBASIC-0.81□□□□□ -2.54
HMGB1P09429 MIR655-201ENST00000362159 97 ntBASIC-0.82□□□□□ -2.54
HMGB1P09429 SNORD114-11-201ENST00000363738 75 ntBASIC-0.82□□□□□ -2.54
HMGB1P09429 U8.6-201ENST00000364939 135 ntBASIC-0.82□□□□□ -2.54
HMGB1P09429 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.82□□□□□ -2.54
HMGB1P09429 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.82□□□□□ -2.54
HMGB1P09429 RNA5SP285-201ENST00000516619 119 ntBASIC-0.82□□□□□ -2.54
HMGB1P09429 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.82□□□□□ -2.54
HMGB1P09429 MIR4432-201ENST00000581823 84 ntBASIC-0.82□□□□□ -2.54
HMGB1P09429 AP001340.1-201ENST00000624405 217 ntBASIC-0.82□□□□□ -2.54
HMGB1P09429 MIR101-1-201ENST00000362265 75 ntBASIC-0.83□□□□□ -2.54
HMGB1P09429 MIR548G-201ENST00000408442 89 ntBASIC-0.83□□□□□ -2.54
HMGB1P09429 AC093423.1-201ENST00000440817 142 ntBASIC-0.83□□□□□ -2.54
HMGB1P09429 AL353621.2-201ENST00000605340 133 ntBASIC-0.83□□□□□ -2.54
HMGB1P09429 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.84□□□□□ -2.54
HMGB1P09429 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.84□□□□□ -2.54
HMGB1P09429 RPS29P8-201ENST00000445109 171 ntBASIC-0.84□□□□□ -2.54
HMGB1P09429 AL590491.3-201ENST00000610731 82 ntBASIC-0.84□□□□□ -2.54
HMGB1P09429 MIR6507-201ENST00000613630 70 ntBASIC-0.84□□□□□ -2.54
HMGB1P09429 SNORD36A-201ENST00000362874 73 ntBASIC-0.85□□□□□ -2.55
HMGB1P09429 SNORD38.1-201ENST00000363863 68 ntBASIC-0.85□□□□□ -2.55
HMGB1P09429 RNA5SP205-201ENST00000364653 136 ntBASIC-0.85□□□□□ -2.55
HMGB1P09429 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.85□□□□□ -2.55
HMGB1P09429 RNA5SP451-201ENST00000410588 110 ntBASIC-0.85□□□□□ -2.55
HMGB1P09429 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.86□□□□□ -2.55
HMGB1P09429 RNU6-363P-201ENST00000362895 105 ntBASIC-0.86□□□□□ -2.55
HMGB1P09429 MT-TG-201ENST00000387429 68 ntBASIC-0.86□□□□□ -2.55
HMGB1P09429 MIR4802-201ENST00000581881 80 ntBASIC-0.86□□□□□ -2.55
HMGB1P09429 AC096720.1-201ENST00000604441 183 ntBASIC-0.86□□□□□ -2.55
HMGB1P09429 U6.100-201ENST00000636230 99 ntBASIC-0.86□□□□□ -2.55
HMGB1P09429 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.87□□□□□ -2.55
HMGB1P09429 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 SNORD114-29-201ENST00000364819 70 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 RNU6-409P-201ENST00000384114 104 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 RNU6-804P-201ENST00000384286 107 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 RNU6-394P-201ENST00000410735 107 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 AL158147.1-201ENST00000443970 75 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.87□□□□□ -2.55
HMGB1P09429 RNU6-781P-201ENST00000516377 101 ntBASIC-0.88□□□□□ -2.55
HMGB1P09429 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.88□□□□□ -2.55
HMGB1P09429 MIR4493-201ENST00000584016 73 ntBASIC-0.88□□□□□ -2.55
HMGB1P09429 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.88□□□□□ -2.55
HMGB1P09429 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.89□□□□□ -2.55
HMGB1P09429 RNU6-154P-201ENST00000384306 106 ntBASIC-0.89□□□□□ -2.55
HMGB1P09429 MIR548AE1-201ENST00000583292 70 ntBASIC-0.89□□□□□ -2.55
HMGB1P09429 U7.2-201ENST00000607576 63 ntBASIC-0.89□□□□□ -2.55
HMGB1P09429 SNORD75.1-201ENST00000408373 60 ntBASIC-0.9□□□□□ -2.55
HMGB1P09429 RNU6-957P-201ENST00000363652 99 ntBASIC-0.91□□□□□ -2.56
HMGB1P09429 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.91□□□□□ -2.56
HMGB1P09429 AL391099.1-201ENST00000624635 187 ntBASIC-0.91□□□□□ -2.56
HMGB1P09429 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.92□□□□□ -2.56
HMGB1P09429 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.92□□□□□ -2.56
HMGB1P09429 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 262.5 ms