Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 U7.2-201ENST00000607576 63 ntBASIC-0.37□□□□□ -2.47
VIMP08670 MIR148A-201ENST00000362215 68 ntBASIC-0.38□□□□□ -2.47
VIMP08670 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.38□□□□□ -2.47
VIMP08670 RNU6-363P-201ENST00000362895 105 ntBASIC-0.38□□□□□ -2.47
VIMP08670 SNORD114-28-201ENST00000363610 72 ntBASIC-0.38□□□□□ -2.47
VIMP08670 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.38□□□□□ -2.47
VIMP08670 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.38□□□□□ -2.47
VIMP08670 MIR569-201ENST00000385228 96 ntBASIC-0.38□□□□□ -2.47
VIMP08670 RNU6-243P-201ENST00000391140 107 ntBASIC-0.38□□□□□ -2.47
VIMP08670 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.38□□□□□ -2.47
VIMP08670 AC093423.1-201ENST00000440817 142 ntBASIC-0.38□□□□□ -2.47
VIMP08670 MIR2113-201ENST00000459007 91 ntBASIC-0.38□□□□□ -2.47
VIMP08670 AC069503.3-201ENST00000618674 145 ntBASIC-0.38□□□□□ -2.47
VIMP08670 TRDV1-202ENST00000621643 102 ntBASIC-0.38□□□□□ -2.47
VIMP08670 SNORD36A-201ENST00000362874 73 ntBASIC-0.39□□□□□ -2.47
VIMP08670 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.39□□□□□ -2.47
VIMP08670 SNORD49B-201ENST00000365172 72 ntBASIC-0.39□□□□□ -2.47
VIMP08670 RNA5SP300-201ENST00000391197 107 ntBASIC-0.39□□□□□ -2.47
VIMP08670 AL161932.1-201ENST00000437408 146 ntBASIC-0.39□□□□□ -2.47
VIMP08670 RNU6-287P-201ENST00000516230 98 ntBASIC-0.39□□□□□ -2.47
VIMP08670 YWHAEP2-201ENST00000580066 112 ntBASIC-0.39□□□□□ -2.47
VIMP08670 RNU6-90P-201ENST00000606352 106 ntBASIC-0.39□□□□□ -2.47
VIMP08670 SNORD38.1-201ENST00000363863 68 ntBASIC-0.4□□□□□ -2.47
VIMP08670 SNORA51.5-201ENST00000384126 131 ntBASIC-0.4□□□□□ -2.47
VIMP08670 MIR329-2-201ENST00000385029 84 ntBASIC-0.4□□□□□ -2.47
VIMP08670 MIR548G-201ENST00000408442 89 ntBASIC-0.4□□□□□ -2.47
VIMP08670 AL353813.1-201ENST00000440700 253 ntBASIC-0.4□□□□□ -2.47
VIMP08670 MIR4263-201ENST00000584745 83 ntBASIC-0.4□□□□□ -2.47
VIMP08670 MIR548AZ-201ENST00000616567 95 ntBASIC-0.4□□□□□ -2.47
VIMP08670 AL162726.3-218ENST00000636401 95 ntBASIC-0.4□□□□□ -2.47
VIMP08670 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.41□□□□□ -2.48
VIMP08670 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.41□□□□□ -2.48
VIMP08670 SNORD14C-201ENST00000365382 88 ntBASIC-0.41□□□□□ -2.48
VIMP08670 SNORD126-201ENST00000459475 77 ntBASIC-0.41□□□□□ -2.48
VIMP08670 RNA5SP272-201ENST00000516095 111 ntBASIC-0.41□□□□□ -2.48
VIMP08670 RNA5SP330-201ENST00000517096 96 ntBASIC-0.41□□□□□ -2.48
VIMP08670 MIR4460-201ENST00000577862 86 ntBASIC-0.41□□□□□ -2.48
VIMP08670 uc_338.10-201ENST00000621872 182 ntBASIC-0.41□□□□□ -2.48
VIMP08670 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.42□□□□□ -2.48
VIMP08670 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.42□□□□□ -2.48
VIMP08670 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.42□□□□□ -2.48
VIMP08670 RNU6-409P-201ENST00000384114 104 ntBASIC-0.42□□□□□ -2.48
VIMP08670 SNORA32.3-201ENST00000384772 121 ntBASIC-0.42□□□□□ -2.48
VIMP08670 AC109327.2-201ENST00000448339 378 ntBASIC-0.42□□□□□ -2.48
VIMP08670 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.42□□□□□ -2.48
VIMP08670 MTND5P41-201ENST00000517498 206 ntBASIC-0.42□□□□□ -2.48
VIMP08670 RN7SL660P-201ENST00000614852 299 ntBASIC-0.42□□□□□ -2.48
VIMP08670 FTX_2.1-201ENST00000618816 94 ntBASIC-0.42□□□□□ -2.48
VIMP08670 U6.100-201ENST00000636230 99 ntBASIC-0.42□□□□□ -2.48
VIMP08670 RNU6-235P-201ENST00000362644 107 ntBASIC-0.43□□□□□ -2.48
VIMP08670 RNY4P6-201ENST00000363667 96 ntBASIC-0.43□□□□□ -2.48
VIMP08670 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.43□□□□□ -2.48
VIMP08670 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.43□□□□□ -2.48
VIMP08670 MIR196A2-201ENST00000385189 110 ntBASIC-0.43□□□□□ -2.48
VIMP08670 AC244250.2-201ENST00000418731 148 ntBASIC-0.43□□□□□ -2.48
VIMP08670 RNU7-188P-201ENST00000517063 64 ntBASIC-0.43□□□□□ -2.48
VIMP08670 uc_338.36-201ENST00000622331 158 ntBASIC-0.43□□□□□ -2.48
VIMP08670 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
VIMP08670 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.44□□□□□ -2.48
VIMP08670 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.44□□□□□ -2.48
VIMP08670 U8.6-201ENST00000364939 135 ntBASIC-0.44□□□□□ -2.48
VIMP08670 RNU6-886P-201ENST00000384319 105 ntBASIC-0.44□□□□□ -2.48
VIMP08670 MIR181B2-201ENST00000385004 89 ntBASIC-0.44□□□□□ -2.48
VIMP08670 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.44□□□□□ -2.48
VIMP08670 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.44□□□□□ -2.48
VIMP08670 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.44□□□□□ -2.48
VIMP08670 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.44□□□□□ -2.48
VIMP08670 AC025166.1-201ENST00000612411 163 ntBASIC-0.44□□□□□ -2.48
VIMP08670 MIR2909-201ENST00000617113 69 ntBASIC-0.44□□□□□ -2.48
VIMP08670 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.44□□□□□ -2.48
VIMP08670 RNU6-957P-201ENST00000363652 99 ntBASIC-0.45□□□□□ -2.48
VIMP08670 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.45□□□□□ -2.48
VIMP08670 RNU6-426P-201ENST00000516464 97 ntBASIC-0.45□□□□□ -2.48
VIMP08670 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.45□□□□□ -2.48
VIMP08670 SNORD58C-201ENST00000365223 64 ntBASIC-0.46□□□□□ -2.48
VIMP08670 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.46□□□□□ -2.48
VIMP08670 RPS29P8-201ENST00000445109 171 ntBASIC-0.46□□□□□ -2.48
VIMP08670 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.46□□□□□ -2.48
VIMP08670 MIR548AE1-201ENST00000583292 70 ntBASIC-0.46□□□□□ -2.48
VIMP08670 MIR6507-201ENST00000613630 70 ntBASIC-0.46□□□□□ -2.48
VIMP08670 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.46□□□□□ -2.48
VIMP08670 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.47□□□□□ -2.48
VIMP08670 MT-TY-201ENST00000387409 66 ntBASIC-0.47□□□□□ -2.48
VIMP08670 RNU6-816P-201ENST00000390914 107 ntBASIC-0.47□□□□□ -2.48
VIMP08670 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.47□□□□□ -2.48
VIMP08670 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.47□□□□□ -2.48
VIMP08670 AL442128.1-201ENST00000615151 90 ntBASIC-0.47□□□□□ -2.48
VIMP08670 AL109933.3-201ENST00000619095 188 ntBASIC-0.47□□□□□ -2.48
VIMP08670 MTND5P18-201ENST00000445624 1801 ntBASIC-0.48□□□□□ -2.49
VIMP08670 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.48□□□□□ -2.49
VIMP08670 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.48□□□□□ -2.49
VIMP08670 RNU6-811P-201ENST00000384069 107 ntBASIC-0.48□□□□□ -2.49
VIMP08670 MIR489-201ENST00000384923 84 ntBASIC-0.48□□□□□ -2.49
VIMP08670 RNU6-284P-201ENST00000411105 106 ntBASIC-0.48□□□□□ -2.49
VIMP08670 AL078595.1-201ENST00000404458 226 ntBASIC-0.49□□□□□ -2.49
VIMP08670 SNORD75.1-201ENST00000408373 60 ntBASIC-0.49□□□□□ -2.49
VIMP08670 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.49□□□□□ -2.49
VIMP08670 AP001180.6-201ENST00000584918 159 ntBASIC-0.49□□□□□ -2.49
VIMP08670 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.49□□□□□ -2.49
VIMP08670 SNORD114-11-201ENST00000363738 75 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms