Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MIR3121-201ENST00000579680 77 ntBASIC-0.37□□□□□ -2.47
CD74P04233 SNORD115-19-201ENST00000363098 82 ntBASIC-0.38□□□□□ -2.47
CD74P04233 SNORD115-18-201ENST00000363293 82 ntBASIC-0.38□□□□□ -2.47
CD74P04233 SNORD115-17-201ENST00000364612 82 ntBASIC-0.38□□□□□ -2.47
CD74P04233 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.38□□□□□ -2.47
CD74P04233 SNORD115-44-201ENST00000365391 82 ntBASIC-0.38□□□□□ -2.47
CD74P04233 SNORA51.5-201ENST00000384126 131 ntBASIC-0.38□□□□□ -2.47
CD74P04233 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.38□□□□□ -2.47
CD74P04233 MIR196A2-201ENST00000385189 110 ntBASIC-0.38□□□□□ -2.47
CD74P04233 SPINT5P-201ENST00000448174 155 ntBASIC-0.38□□□□□ -2.47
CD74P04233 SNORD126-201ENST00000459475 77 ntBASIC-0.38□□□□□ -2.47
CD74P04233 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.38□□□□□ -2.47
CD74P04233 AC069503.3-201ENST00000618674 145 ntBASIC-0.38□□□□□ -2.47
CD74P04233 AL162726.3-218ENST00000636401 95 ntBASIC-0.38□□□□□ -2.47
CD74P04233 AL512310.12-203ENST00000640543 90 ntBASIC-0.38□□□□□ -2.47
CD74P04233 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.39□□□□□ -2.47
CD74P04233 RNU6-811P-201ENST00000384069 107 ntBASIC-0.39□□□□□ -2.47
CD74P04233 MIR181B2-201ENST00000385004 89 ntBASIC-0.39□□□□□ -2.47
CD74P04233 RNU6-243P-201ENST00000391140 107 ntBASIC-0.39□□□□□ -2.47
CD74P04233 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.39□□□□□ -2.47
CD74P04233 RNA5SP451-201ENST00000410588 110 ntBASIC-0.39□□□□□ -2.47
CD74P04233 AC109327.2-201ENST00000448339 378 ntBASIC-0.39□□□□□ -2.47
CD74P04233 MIR2113-201ENST00000459007 91 ntBASIC-0.39□□□□□ -2.47
CD74P04233 RNU6-287P-201ENST00000516230 98 ntBASIC-0.39□□□□□ -2.47
CD74P04233 MIR3666-201ENST00000607845 111 ntBASIC-0.39□□□□□ -2.47
CD74P04233 AL590491.3-201ENST00000610731 82 ntBASIC-0.39□□□□□ -2.47
CD74P04233 TRDV1-202ENST00000621643 102 ntBASIC-0.39□□□□□ -2.47
CD74P04233 MIR4788-201ENST00000639104 80 ntBASIC-0.39□□□□□ -2.47
CD74P04233 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.39□□□□□ -2.47
CD74P04233 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.4□□□□□ -2.47
CD74P04233 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.4□□□□□ -2.47
CD74P04233 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.4□□□□□ -2.47
CD74P04233 AC093423.1-201ENST00000440817 142 ntBASIC-0.4□□□□□ -2.47
CD74P04233 MIR548AE1-201ENST00000583292 70 ntBASIC-0.4□□□□□ -2.47
CD74P04233 AC108676.2-201ENST00000605225 163 ntBASIC-0.4□□□□□ -2.47
CD74P04233 MIR8064-201ENST00000612863 90 ntBASIC-0.4□□□□□ -2.47
CD74P04233 FTX_2.1-201ENST00000618816 94 ntBASIC-0.4□□□□□ -2.47
CD74P04233 RNU6-682P-201ENST00000363843 106 ntBASIC-0.41□□□□□ -2.48
CD74P04233 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.41□□□□□ -2.48
CD74P04233 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.41□□□□□ -2.48
CD74P04233 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.41□□□□□ -2.48
CD74P04233 RNU6-463P-201ENST00000384340 107 ntBASIC-0.41□□□□□ -2.48
CD74P04233 MIR513C-201ENST00000401352 84 ntBASIC-0.41□□□□□ -2.48
CD74P04233 RNU6-735P-201ENST00000410612 107 ntBASIC-0.41□□□□□ -2.48
CD74P04233 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.41□□□□□ -2.48
CD74P04233 RNU7-197P-201ENST00000458836 62 ntBASIC-0.41□□□□□ -2.48
CD74P04233 AC074198.2-201ENST00000508153 258 ntBASIC-0.41□□□□□ -2.48
CD74P04233 RN7SKP19-201ENST00000516016 252 ntBASIC-0.41□□□□□ -2.48
CD74P04233 MIR4263-201ENST00000584745 83 ntBASIC-0.41□□□□□ -2.48
CD74P04233 SNORD114-15-201ENST00000364687 72 ntBASIC-0.42□□□□□ -2.48
CD74P04233 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.42□□□□□ -2.48
CD74P04233 RNU6-154P-201ENST00000384306 106 ntBASIC-0.42□□□□□ -2.48
CD74P04233 RNU6-480P-201ENST00000384332 107 ntBASIC-0.42□□□□□ -2.48
CD74P04233 SNORA32.3-201ENST00000384772 121 ntBASIC-0.42□□□□□ -2.48
CD74P04233 RNU7-120P-201ENST00000459334 63 ntBASIC-0.42□□□□□ -2.48
CD74P04233 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.42□□□□□ -2.48
CD74P04233 uc_338.36-201ENST00000622331 158 ntBASIC-0.42□□□□□ -2.48
CD74P04233 U6.100-201ENST00000636230 99 ntBASIC-0.42□□□□□ -2.48
CD74P04233 SNORD36A-201ENST00000362874 73 ntBASIC-0.43□□□□□ -2.48
CD74P04233 SNORD95.1-201ENST00000364099 68 ntBASIC-0.43□□□□□ -2.48
CD74P04233 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.43□□□□□ -2.48
CD74P04233 RNA5SP368-201ENST00000364298 116 ntBASIC-0.43□□□□□ -2.48
CD74P04233 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.43□□□□□ -2.48
CD74P04233 SNORD114-29-201ENST00000364819 70 ntBASIC-0.43□□□□□ -2.48
CD74P04233 SNORD116-18-201ENST00000383961 92 ntBASIC-0.43□□□□□ -2.48
CD74P04233 RNU6-138P-201ENST00000515952 107 ntBASIC-0.43□□□□□ -2.48
CD74P04233 RNU6-388P-201ENST00000517012 105 ntBASIC-0.43□□□□□ -2.48
CD74P04233 RNU6-389P-201ENST00000517048 105 ntBASIC-0.43□□□□□ -2.48
CD74P04233 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.43□□□□□ -2.48
CD74P04233 RNA5SP169-201ENST00000517268 117 ntBASIC-0.43□□□□□ -2.48
CD74P04233 RNU6-90P-201ENST00000606352 106 ntBASIC-0.43□□□□□ -2.48
CD74P04233 MIR548AZ-201ENST00000616567 95 ntBASIC-0.43□□□□□ -2.48
CD74P04233 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.44□□□□□ -2.48
CD74P04233 RNU6-379P-201ENST00000363813 104 ntBASIC-0.44□□□□□ -2.48
CD74P04233 RNU6-647P-201ENST00000364243 107 ntBASIC-0.44□□□□□ -2.48
CD74P04233 MIR548G-201ENST00000408442 89 ntBASIC-0.44□□□□□ -2.48
CD74P04233 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.44□□□□□ -2.48
CD74P04233 AC114755.3-201ENST00000481111 251 ntBASIC-0.44□□□□□ -2.48
CD74P04233 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.44□□□□□ -2.48
CD74P04233 AP001328.1-201ENST00000528550 176 ntBASIC-0.44□□□□□ -2.48
CD74P04233 MIR4436A-201ENST00000585278 85 ntBASIC-0.44□□□□□ -2.48
CD74P04233 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.44□□□□□ -2.48
CD74P04233 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.45□□□□□ -2.48
CD74P04233 RNU6-957P-201ENST00000363652 99 ntBASIC-0.45□□□□□ -2.48
CD74P04233 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.45□□□□□ -2.48
CD74P04233 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.45□□□□□ -2.48
CD74P04233 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.45□□□□□ -2.48
CD74P04233 RNU6-200P-201ENST00000364743 107 ntBASIC-0.45□□□□□ -2.48
CD74P04233 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.45□□□□□ -2.48
CD74P04233 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.45□□□□□ -2.48
CD74P04233 MIR548D2-201ENST00000384955 97 ntBASIC-0.45□□□□□ -2.48
CD74P04233 MT-TY-201ENST00000387409 66 ntBASIC-0.45□□□□□ -2.48
CD74P04233 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
CD74P04233 RNA5SP136-201ENST00000410906 107 ntBASIC-0.45□□□□□ -2.48
CD74P04233 RPS29P8-201ENST00000445109 171 ntBASIC-0.45□□□□□ -2.48
CD74P04233 RNU6-175P-201ENST00000516896 107 ntBASIC-0.45□□□□□ -2.48
CD74P04233 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.45□□□□□ -2.48
CD74P04233 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.46□□□□□ -2.48
CD74P04233 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.46□□□□□ -2.48
CD74P04233 SNORD38.1-201ENST00000363863 68 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms