Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.73□□□□□ -2.53
CLDN3O15551 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.74□□□□□ -2.53
CLDN3O15551 MT-TI-201ENST00000387365 69 ntBASIC-0.74□□□□□ -2.53
CLDN3O15551 RNU6-243P-201ENST00000391140 107 ntBASIC-0.74□□□□□ -2.53
CLDN3O15551 RNU4-63P-201ENST00000411313 118 ntBASIC-0.74□□□□□ -2.53
CLDN3O15551 AC022559.1-201ENST00000520905 205 ntBASIC-0.74□□□□□ -2.53
CLDN3O15551 TRDV1-202ENST00000621643 102 ntBASIC-0.74□□□□□ -2.53
CLDN3O15551 AC021753.1-201ENST00000635724 168 ntBASIC-0.74□□□□□ -2.53
CLDN3O15551 SNORD36A-201ENST00000362874 73 ntBASIC-0.75□□□□□ -2.53
CLDN3O15551 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.75□□□□□ -2.53
CLDN3O15551 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.75□□□□□ -2.53
CLDN3O15551 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.75□□□□□ -2.53
CLDN3O15551 MIR3163-201ENST00000581592 73 ntBASIC-0.75□□□□□ -2.53
CLDN3O15551 RNU6-480P-201ENST00000384332 107 ntBASIC-0.76□□□□□ -2.53
CLDN3O15551 RNU6-455P-201ENST00000384681 107 ntBASIC-0.76□□□□□ -2.53
CLDN3O15551 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
CLDN3O15551 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.76□□□□□ -2.53
CLDN3O15551 AL161932.1-201ENST00000437408 146 ntBASIC-0.76□□□□□ -2.53
CLDN3O15551 AC114755.3-201ENST00000481111 251 ntBASIC-0.76□□□□□ -2.53
CLDN3O15551 AC074198.2-201ENST00000508153 258 ntBASIC-0.76□□□□□ -2.53
CLDN3O15551 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.76□□□□□ -2.53
CLDN3O15551 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.77□□□□□ -2.53
CLDN3O15551 RNA5SP25-201ENST00000410815 110 ntBASIC-0.77□□□□□ -2.53
CLDN3O15551 RNA5SP66-201ENST00000517178 101 ntBASIC-0.77□□□□□ -2.53
CLDN3O15551 MIR3121-201ENST00000579680 77 ntBASIC-0.77□□□□□ -2.53
CLDN3O15551 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.77□□□□□ -2.53
CLDN3O15551 U6.100-201ENST00000636230 99 ntBASIC-0.77□□□□□ -2.53
CLDN3O15551 MIR20A-201ENST00000362279 71 ntBASIC-0.78□□□□□ -2.53
CLDN3O15551 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.78□□□□□ -2.53
CLDN3O15551 MIR4432-201ENST00000581823 84 ntBASIC-0.78□□□□□ -2.53
CLDN3O15551 MIR1255B1-201ENST00000636325 63 ntBASIC-0.78□□□□□ -2.53
CLDN3O15551 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.79□□□□□ -2.54
CLDN3O15551 SNORD95.1-201ENST00000364099 68 ntBASIC-0.79□□□□□ -2.54
CLDN3O15551 SPINT5P-201ENST00000448174 155 ntBASIC-0.79□□□□□ -2.54
CLDN3O15551 IGKV1-22-201ENST00000524313 326 ntBASIC-0.79□□□□□ -2.54
CLDN3O15551 AC007012.1-201ENST00000567192 175 ntBASIC-0.79□□□□□ -2.54
CLDN3O15551 AC130289.1-201ENST00000577321 73 ntBASIC-0.79□□□□□ -2.54
CLDN3O15551 AC072026.1-201ENST00000605023 201 ntBASIC-0.79□□□□□ -2.54
CLDN3O15551 MIR759-201ENST00000390224 91 ntBASIC-0.8□□□□□ -2.54
CLDN3O15551 MIR3681-201ENST00000580089 72 ntBASIC-0.8□□□□□ -2.54
CLDN3O15551 MIR6086-201ENST00000638065 55 ntBASIC-0.8□□□□□ -2.54
CLDN3O15551 SNORA7.5-201ENST00000410672 110 ntBASIC-0.81□□□□□ -2.54
CLDN3O15551 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.81□□□□□ -2.54
CLDN3O15551 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.81□□□□□ -2.54
CLDN3O15551 RNU6-90P-201ENST00000606352 106 ntBASIC-0.81□□□□□ -2.54
CLDN3O15551 U4.1-201ENST00000620349 87 ntBASIC-0.81□□□□□ -2.54
CLDN3O15551 AL512310.12-203ENST00000640543 90 ntBASIC-0.81□□□□□ -2.54
CLDN3O15551 RNU6-957P-201ENST00000363652 99 ntBASIC-0.82□□□□□ -2.54
CLDN3O15551 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.82□□□□□ -2.54
CLDN3O15551 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.82□□□□□ -2.54
CLDN3O15551 MIR9-2-201ENST00000384838 87 ntBASIC-0.82□□□□□ -2.54
CLDN3O15551 MIR652-201ENST00000385278 98 ntBASIC-0.82□□□□□ -2.54
CLDN3O15551 AC244090.1-201ENST00000441884 93 ntBASIC-0.82□□□□□ -2.54
CLDN3O15551 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.83□□□□□ -2.54
CLDN3O15551 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.83□□□□□ -2.54
CLDN3O15551 MIR548G-201ENST00000408442 89 ntBASIC-0.83□□□□□ -2.54
CLDN3O15551 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.83□□□□□ -2.54
CLDN3O15551 RNU6-138P-201ENST00000515952 107 ntBASIC-0.83□□□□□ -2.54
CLDN3O15551 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.83□□□□□ -2.54
CLDN3O15551 AP001328.1-201ENST00000528550 176 ntBASIC-0.83□□□□□ -2.54
CLDN3O15551 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 SNORD38.1-201ENST00000363863 68 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 RNU4-11P-201ENST00000365287 132 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 AL118496.2-201ENST00000448300 230 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 RN7SKP19-201ENST00000516016 252 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 AP000676.1-201ENST00000533307 52 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 AC141273.2-201ENST00000618989 130 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 AC093726.3-201ENST00000637588 150 ntBASIC-0.84□□□□□ -2.54
CLDN3O15551 RNU6-363P-201ENST00000362895 105 ntBASIC-0.85□□□□□ -2.55
CLDN3O15551 SNORD114-15-201ENST00000364687 72 ntBASIC-0.85□□□□□ -2.55
CLDN3O15551 RNU6-900P-201ENST00000384498 102 ntBASIC-0.85□□□□□ -2.55
CLDN3O15551 RNY1P7-201ENST00000384743 110 ntBASIC-0.85□□□□□ -2.55
CLDN3O15551 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.85□□□□□ -2.55
CLDN3O15551 RNU7-197P-201ENST00000458836 62 ntBASIC-0.85□□□□□ -2.55
CLDN3O15551 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.86□□□□□ -2.55
CLDN3O15551 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.86□□□□□ -2.55
CLDN3O15551 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.86□□□□□ -2.55
CLDN3O15551 RNU6-915P-201ENST00000364943 103 ntBASIC-0.86□□□□□ -2.55
CLDN3O15551 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.86□□□□□ -2.55
CLDN3O15551 MIR216B-201ENST00000390186 82 ntBASIC-0.86□□□□□ -2.55
CLDN3O15551 RNU6-460P-201ENST00000391158 108 ntBASIC-0.86□□□□□ -2.55
CLDN3O15551 RNA5SP136-201ENST00000410906 107 ntBASIC-0.86□□□□□ -2.55
CLDN3O15551 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.86□□□□□ -2.55
CLDN3O15551 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.86□□□□□ -2.55
CLDN3O15551 RNU6-327P-201ENST00000516270 127 ntBASIC-0.86□□□□□ -2.55
CLDN3O15551 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.87□□□□□ -2.55
CLDN3O15551 SNORD101-201ENST00000384027 73 ntBASIC-0.87□□□□□ -2.55
CLDN3O15551 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.87□□□□□ -2.55
CLDN3O15551 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.87□□□□□ -2.55
CLDN3O15551 MIR4696-201ENST00000581431 70 ntBASIC-0.87□□□□□ -2.55
CLDN3O15551 MIR4436A-201ENST00000585278 85 ntBASIC-0.87□□□□□ -2.55
CLDN3O15551 RNU6-664P-201ENST00000362381 107 ntBASIC-0.88□□□□□ -2.55
CLDN3O15551 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.88□□□□□ -2.55
CLDN3O15551 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.88□□□□□ -2.55
CLDN3O15551 MIR548D2-201ENST00000384955 97 ntBASIC-0.88□□□□□ -2.55
CLDN3O15551 MIR1263-201ENST00000408324 86 ntBASIC-0.88□□□□□ -2.55
CLDN3O15551 AP002392.1-201ENST00000537692 208 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms