Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNA5SP275-201ENST00000363936 118 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 AC114755.3-201ENST00000481111 251 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 AC141273.2-201ENST00000618989 130 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 RNU6-957P-201ENST00000363652 99 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 RNU6-647P-201ENST00000364243 107 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 SNORD56B-201ENST00000384713 71 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 MIR519A1-201ENST00000385257 85 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 AC109327.2-201ENST00000448339 378 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 RNU6-850P-201ENST00000516934 103 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 FTX_2.1-201ENST00000618816 94 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 MIR6738-201ENST00000619620 64 ntBASIC-0.2□□□□□ -2.44
COL6A6A6NMZ7 RNU6-664P-201ENST00000362381 107 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 SNORD114-4-201ENST00000363962 75 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 SNORA32-201ENST00000384072 121 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 RNU7-123P-201ENST00000515911 60 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 RNU6-240P-201ENST00000516098 97 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 AL117187.1-201ENST00000555482 181 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 MIR4324-201ENST00000584846 72 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 AL590491.3-201ENST00000610731 82 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 SNORD114-29-201ENST00000364819 70 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 RNU6-455P-201ENST00000384681 107 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 SNORA75.5-201ENST00000391291 81 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 RNU6-388P-201ENST00000517012 105 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 RNU6-389P-201ENST00000517048 105 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 RNU6-158P-201ENST00000517104 100 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 AL442128.1-201ENST00000615151 90 ntBASIC-0.21□□□□□ -2.44
COL6A6A6NMZ7 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 RNU6-170P-201ENST00000362832 104 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 SNORA49-201ENST00000386157 136 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 MT-TY-201ENST00000387409 66 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 RNU6-284P-201ENST00000411105 106 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 MIR4536-1-201ENST00000583537 88 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 RNU6-90P-201ENST00000606352 106 ntBASIC-0.22□□□□□ -2.44
COL6A6A6NMZ7 RNY4P27-201ENST00000363341 96 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 SNORD115-44-201ENST00000365391 82 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 RNU6-47P-201ENST00000383866 107 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 RNU6-80P-201ENST00000384195 107 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 RNU6-291P-201ENST00000384720 107 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 SCARNA17-201ENST00000516183 144 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 MIR3920-201ENST00000581751 86 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 AL512310.12-203ENST00000640543 90 ntBASIC-0.22□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 SNORA20.1-201ENST00000364790 130 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 U8.6-201ENST00000364939 135 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 MIR599-201ENST00000385069 95 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 SNORA3B-201ENST00000391305 131 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 MIR876-201ENST00000401147 81 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 MIR1302-3-201ENST00000408128 138 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 RNU7-195P-201ENST00000458793 62 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 RNA5SP180-201ENST00000516181 101 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 RNU6-861P-201ENST00000516745 106 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 U6.100-201ENST00000636230 99 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 MIR3658-201ENST00000636291 56 ntBASIC-0.23□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 SNORD63B-201ENST00000411005 70 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 AC107027.2-201ENST00000512197 115 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 MIR4441-201ENST00000582623 100 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 SNORD38.1-201ENST00000363863 68 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 RNU6-480P-201ENST00000384332 107 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 AC108059.2-201ENST00000434626 151 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 RNU6-111P-201ENST00000517179 105 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 MIR4473-201ENST00000583731 91 ntBASIC-0.24□□□□□ -2.45
COL6A6A6NMZ7 MIR655-201ENST00000362159 97 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 MIR519E-201ENST00000385075 84 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms