Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 RNU6-1006P-201ENST00000516998 103 ntBASIC0.03□□□□□ -2.4
NKX6-3A6NJ46 MIR3133-201ENST00000583157 78 ntBASIC0.03□□□□□ -2.4
NKX6-3A6NJ46 SNORD38.1-201ENST00000363863 68 ntBASIC0.02□□□□□ -2.41
NKX6-3A6NJ46 MIR610-201ENST00000385139 96 ntBASIC0.02□□□□□ -2.41
NKX6-3A6NJ46 MT-TR-201ENST00000387439 65 ntBASIC0.02□□□□□ -2.41
NKX6-3A6NJ46 MIR501-201ENST00000390204 84 ntBASIC0.02□□□□□ -2.41
NKX6-3A6NJ46 MIR5706-201ENST00000579841 80 ntBASIC0.02□□□□□ -2.41
NKX6-3A6NJ46 MIR5190-201ENST00000581537 80 ntBASIC0.02□□□□□ -2.41
NKX6-3A6NJ46 AL162726.3-218ENST00000636401 95 ntBASIC0.02□□□□□ -2.41
NKX6-3A6NJ46 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 RNU6-243P-201ENST00000391140 107 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 RNU6-1254P-201ENST00000391266 104 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 SNORD110-201ENST00000408189 75 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 Y_RNA.649-201ENST00000459077 103 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 RNU6-848P-201ENST00000515948 107 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 RNU6-617P-201ENST00000516147 107 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 RNU6-473P-201ENST00000516164 107 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 RNU6-1049P-201ENST00000516414 107 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 AL035470.1-201ENST00000622571 220 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 AC073869.9-201ENST00000641610 120 ntBASIC0.01□□□□□ -2.41
NKX6-3A6NJ46 RNU6-1201P-201ENST00000384227 107 ntBASIC0□□□□□ -2.41
NKX6-3A6NJ46 MIR548A1-201ENST00000385041 97 ntBASIC0□□□□□ -2.41
NKX6-3A6NJ46 MIR548I1-201ENST00000408810 149 ntBASIC0□□□□□ -2.41
NKX6-3A6NJ46 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
NKX6-3A6NJ46 AL442128.1-201ENST00000615151 90 ntBASIC0□□□□□ -2.41
NKX6-3A6NJ46 RNU6-509P-201ENST00000363519 107 ntBASIC-0.01□□□□□ -2.41
NKX6-3A6NJ46 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.01□□□□□ -2.41
NKX6-3A6NJ46 MIR145-201ENST00000384967 88 ntBASIC-0.01□□□□□ -2.41
NKX6-3A6NJ46 MIR1912-201ENST00000410389 80 ntBASIC-0.01□□□□□ -2.41
NKX6-3A6NJ46 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.01□□□□□ -2.41
NKX6-3A6NJ46 AC007012.1-201ENST00000567192 175 ntBASIC-0.01□□□□□ -2.41
NKX6-3A6NJ46 SNORD36A-201ENST00000362874 73 ntBASIC-0.02□□□□□ -2.41
NKX6-3A6NJ46 RNA5SP257-201ENST00000363023 116 ntBASIC-0.02□□□□□ -2.41
NKX6-3A6NJ46 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.02□□□□□ -2.41
NKX6-3A6NJ46 SNORD33.1-201ENST00000516213 88 ntBASIC-0.02□□□□□ -2.41
NKX6-3A6NJ46 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.02□□□□□ -2.41
NKX6-3A6NJ46 MIR548AG2-201ENST00000581228 64 ntBASIC-0.02□□□□□ -2.41
NKX6-3A6NJ46 U7.6-201ENST00000610841 64 ntBASIC-0.02□□□□□ -2.41
NKX6-3A6NJ46 uc_338.28-201ENST00000612082 187 ntBASIC-0.02□□□□□ -2.41
NKX6-3A6NJ46 TRDV1-202ENST00000621643 102 ntBASIC-0.02□□□□□ -2.41
NKX6-3A6NJ46 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.02□□□□□ -2.41
NKX6-3A6NJ46 RNU6-652P-201ENST00000365488 107 ntBASIC-0.03□□□□□ -2.41
NKX6-3A6NJ46 RNU6-80P-201ENST00000384195 107 ntBASIC-0.03□□□□□ -2.41
NKX6-3A6NJ46 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.03□□□□□ -2.41
NKX6-3A6NJ46 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
NKX6-3A6NJ46 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 RNU6-957P-201ENST00000363652 99 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 HMGN2P22-201ENST00000427588 175 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 RNU6-782P-201ENST00000516852 104 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 MIR4677-201ENST00000584153 80 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 U6.100-201ENST00000636230 99 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 MIR3914-2-201ENST00000637339 95 ntBASIC-0.04□□□□□ -2.42
NKX6-3A6NJ46 RNU1-141P-201ENST00000364623 158 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 MIR519E-201ENST00000385075 84 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 MIR577-201ENST00000385196 96 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 MIR548A3-201ENST00000385297 97 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 MIR2113-201ENST00000459007 91 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 RNU7-74P-201ENST00000459104 62 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 MIR4473-201ENST00000583731 91 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 MIR548AD-201ENST00000584780 82 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 AC096720.1-201ENST00000604441 183 ntBASIC-0.05□□□□□ -2.42
NKX6-3A6NJ46 SNORA51.5-201ENST00000384126 131 ntBASIC-0.06□□□□□ -2.42
NKX6-3A6NJ46 MIR548H2-201ENST00000408874 88 ntBASIC-0.06□□□□□ -2.42
NKX6-3A6NJ46 RNA5SP163-201ENST00000410304 99 ntBASIC-0.06□□□□□ -2.42
NKX6-3A6NJ46 RNU6-287P-201ENST00000516230 98 ntBASIC-0.06□□□□□ -2.42
NKX6-3A6NJ46 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.06□□□□□ -2.42
NKX6-3A6NJ46 MIR3925-201ENST00000584674 77 ntBASIC-0.06□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.07□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.07□□□□□ -2.42
NKX6-3A6NJ46 SNORD115-44-201ENST00000365391 82 ntBASIC-0.07□□□□□ -2.42
NKX6-3A6NJ46 MIR106A-201ENST00000384870 81 ntBASIC-0.07□□□□□ -2.42
NKX6-3A6NJ46 MIR181B2-201ENST00000385004 89 ntBASIC-0.07□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.07□□□□□ -2.42
NKX6-3A6NJ46 AC068339.1-201ENST00000526965 141 ntBASIC-0.07□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 RNU6-929P-201ENST00000384429 107 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 MIR617-201ENST00000385030 97 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 MIR516B1-201ENST00000385211 90 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 AC109327.2-201ENST00000448339 378 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 snoU13.11-201ENST00000459219 104 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 RNU6-659P-201ENST00000516454 104 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 MIR4290-201ENST00000583807 95 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 RNU6-86P-201ENST00000606534 107 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 AC084368.1-201ENST00000620935 65 ntBASIC-0.08□□□□□ -2.42
NKX6-3A6NJ46 RNU6-832P-201ENST00000363319 107 ntBASIC-0.09□□□□□ -2.42
NKX6-3A6NJ46 RNU6-466P-201ENST00000391224 103 ntBASIC-0.09□□□□□ -2.42
NKX6-3A6NJ46 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.09□□□□□ -2.42
NKX6-3A6NJ46 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.09□□□□□ -2.42
NKX6-3A6NJ46 MIR4460-201ENST00000577862 86 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms