Protein–RNA interactions for Protein: Q9Y4P8

WIPI2, WD repeat domain phosphoinositide-interacting protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2Q9Y4P8 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 Y_RNA.507-201ENST00000384500 99 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 RNU6-816P-201ENST00000390914 107 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 RNU6-1268P-201ENST00000391214 107 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 RNU6-1239P-201ENST00000391310 107 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 AL353813.1-201ENST00000440700 253 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 AC244505.6-201ENST00000452829 130 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 Y_RNA.649-201ENST00000459077 103 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 Y_RNA.712-201ENST00000517011 92 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 RNU7-10P-201ENST00000607194 63 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.35□□□□□ -2.35
WIPI2Q9Y4P8 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.221-201ENST00000364248 96 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.247-201ENST00000364500 92 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 SNORD116-14-201ENST00000383894 92 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 SNORD116-17-201ENST00000383929 92 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 SNORD116-15-201ENST00000384445 92 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 SNORD116-19-201ENST00000384729 92 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 MIR548A1-201ENST00000385041 97 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 SNORD63B-201ENST00000411005 70 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 RNU6-1333P-201ENST00000516162 93 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 MTND5P40-201ENST00000559945 246 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 AC007012.1-201ENST00000567192 175 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 MIR8087-201ENST00000612745 78 ntBASIC0.34□□□□□ -2.36
WIPI2Q9Y4P8 RNU6-170P-201ENST00000362832 104 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 RNA5SP457-201ENST00000363657 124 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 SNORD38.2-201ENST00000384470 69 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.549-201ENST00000384657 102 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 MIR599-201ENST00000385069 95 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 SNRPGP12-201ENST00000449481 213 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 RNU7-195P-201ENST00000458793 62 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 RNU7-104P-201ENST00000459398 79 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 RNU6-850P-201ENST00000516934 103 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 MIR6828-201ENST00000636181 60 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 AL162726.3-218ENST00000636401 95 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 AC091304.10-201ENST00000641554 121 ntBASIC0.33□□□□□ -2.36
WIPI2Q9Y4P8 RNU6-1313P-201ENST00000362622 102 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.261-201ENST00000364631 102 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 RNU6-571P-201ENST00000384128 107 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 RNU6-959P-201ENST00000384671 107 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 MIR548A3-201ENST00000385297 97 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 MIR548I2-201ENST00000408348 149 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 AC069271.1-201ENST00000445577 156 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 SPINT5P-201ENST00000448174 155 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 RNU6-1006P-201ENST00000516998 103 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 RNA5SP330-201ENST00000517096 96 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 RNU7-161P-201ENST00000517289 62 ntBASIC0.32□□□□□ -2.36
WIPI2Q9Y4P8 MIR330-201ENST00000362196 94 ntBASIC0.31□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.85-201ENST00000363014 111 ntBASIC0.31□□□□□ -2.36
WIPI2Q9Y4P8 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
WIPI2Q9Y4P8 MIR548L-201ENST00000408303 86 ntBASIC0.31□□□□□ -2.36
WIPI2Q9Y4P8 TMSB4XP3-201ENST00000445144 114 ntBASIC0.31□□□□□ -2.36
WIPI2Q9Y4P8 AC097635.1-201ENST00000450678 155 ntBASIC0.31□□□□□ -2.36
WIPI2Q9Y4P8 RNU7-106P-201ENST00000459514 67 ntBASIC0.31□□□□□ -2.36
WIPI2Q9Y4P8 U6.95-201ENST00000636931 70 ntBASIC0.31□□□□□ -2.36
WIPI2Q9Y4P8 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
WIPI2Q9Y4P8 RNU6-1201P-201ENST00000384227 107 ntBASIC0.3□□□□□ -2.36
WIPI2Q9Y4P8 MIR516A2-201ENST00000384888 90 ntBASIC0.3□□□□□ -2.36
WIPI2Q9Y4P8 MIR516A1-201ENST00000385033 90 ntBASIC0.3□□□□□ -2.36
WIPI2Q9Y4P8 MIR1912-201ENST00000410389 80 ntBASIC0.3□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.809-201ENST00000516058 95 ntBASIC0.3□□□□□ -2.36
WIPI2Q9Y4P8 SNORA62.5-201ENST00000516634 120 ntBASIC0.3□□□□□ -2.36
WIPI2Q9Y4P8 SNORD38.1-201ENST00000363863 68 ntBASIC0.29□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.342-201ENST00000365352 113 ntBASIC0.29□□□□□ -2.36
WIPI2Q9Y4P8 MIR548G-201ENST00000408442 89 ntBASIC0.29□□□□□ -2.36
WIPI2Q9Y4P8 RPL39P34-201ENST00000477141 156 ntBASIC0.29□□□□□ -2.36
WIPI2Q9Y4P8 RNU6-1018P-201ENST00000516577 106 ntBASIC0.29□□□□□ -2.36
WIPI2Q9Y4P8 MIR4752-201ENST00000579672 72 ntBASIC0.29□□□□□ -2.36
WIPI2Q9Y4P8 AL670379.3-201ENST00000605040 251 ntBASIC0.29□□□□□ -2.36
WIPI2Q9Y4P8 AL365222.1-201ENST00000614661 98 ntBASIC0.29□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.30-201ENST00000362572 97 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 RNA5SP403-201ENST00000363598 108 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.309-201ENST00000365046 111 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.353-201ENST00000365440 108 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 RNU2-59P-201ENST00000410482 191 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 MIR4679-2-201ENST00000578358 77 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 RNU6-90P-201ENST00000606352 106 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 AL442128.1-201ENST00000615151 90 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 AL109933.3-201ENST00000619095 188 ntBASIC0.28□□□□□ -2.36
WIPI2Q9Y4P8 Y_RNA.35-201ENST00000362601 101 ntBASIC0.27□□□□□ -2.37
WIPI2Q9Y4P8 RNA5SP62-201ENST00000363457 110 ntBASIC0.27□□□□□ -2.37
WIPI2Q9Y4P8 RNU6-726P-201ENST00000364680 107 ntBASIC0.27□□□□□ -2.37
WIPI2Q9Y4P8 RNU6-81P-201ENST00000365608 104 ntBASIC0.27□□□□□ -2.37
WIPI2Q9Y4P8 RNU6-524P-201ENST00000384270 107 ntBASIC0.27□□□□□ -2.37
WIPI2Q9Y4P8 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
WIPI2Q9Y4P8 AC068339.1-201ENST00000526965 141 ntBASIC0.27□□□□□ -2.37
WIPI2Q9Y4P8 AC067863.3-201ENST00000624172 122 ntBASIC0.27□□□□□ -2.37
WIPI2Q9Y4P8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
WIPI2Q9Y4P8 Y_RNA.57-201ENST00000362806 113 ntBASIC0.26□□□□□ -2.37
WIPI2Q9Y4P8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
WIPI2Q9Y4P8 Y_RNA.374-201ENST00000365606 101 ntBASIC0.26□□□□□ -2.37
WIPI2Q9Y4P8 MIR577-201ENST00000385196 96 ntBASIC0.26□□□□□ -2.37
WIPI2Q9Y4P8 MIR519A1-201ENST00000385257 85 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms