Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNA5SP457-201ENST00000363657 124 ntBASIC0.42□□□□□ -2.34
USP44Q9H0E7 Y_RNA.362-201ENST00000365518 110 ntBASIC0.42□□□□□ -2.34
USP44Q9H0E7 MIR548I2-201ENST00000408348 149 ntBASIC0.42□□□□□ -2.34
USP44Q9H0E7 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
USP44Q9H0E7 SNORD115-24-201ENST00000363528 82 ntBASIC0.41□□□□□ -2.34
USP44Q9H0E7 MIR7107-201ENST00000611489 80 ntBASIC0.41□□□□□ -2.34
USP44Q9H0E7 MIR330-201ENST00000362196 94 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 RNU6-1313P-201ENST00000362622 102 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 SNORD44.1-201ENST00000363202 61 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 SNORD116-14-201ENST00000383894 92 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 SNORD116-17-201ENST00000383929 92 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 RNU6-409P-201ENST00000384114 104 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 SNORD116-15-201ENST00000384445 92 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 SNORD116-19-201ENST00000384729 92 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 SNRPGP12-201ENST00000449481 213 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 RNU6-1006P-201ENST00000516998 103 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.4□□□□□ -2.35
USP44Q9H0E7 MIR8087-201ENST00000612745 78 ntBASIC0.4□□□□□ -2.35
USP44Q9H0E7 Y_RNA.85-201ENST00000363014 111 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 Y_RNA.155-201ENST00000363632 101 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 RNU6-571P-201ENST00000384128 107 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 RNU6-816P-201ENST00000390914 107 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 RNU6-1268P-201ENST00000391214 107 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 RNU6-1239P-201ENST00000391310 107 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 Y_RNA.649-201ENST00000459077 103 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 RNU6-848P-201ENST00000515948 107 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 RNU6-617P-201ENST00000516147 107 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 RNU6-473P-201ENST00000516164 107 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 RNA5SP227-201ENST00000516184 113 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 SNORD33.1-201ENST00000516213 88 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 RNU6-1049P-201ENST00000516414 107 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 AL035470.1-201ENST00000622571 220 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 AL162726.3-218ENST00000636401 95 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 AL512310.12-203ENST00000640543 90 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 AC091304.10-201ENST00000641554 121 ntBASIC0.39□□□□□ -2.35
USP44Q9H0E7 MIR103A1-201ENST00000362165 78 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 RNU6-170P-201ENST00000362832 104 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 Y_RNA.247-201ENST00000364500 92 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 RNU6-81P-201ENST00000365608 104 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 Y_RNA.507-201ENST00000384500 99 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 Y_RNA.549-201ENST00000384657 102 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 RNU6-959P-201ENST00000384671 107 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 SNORD63B-201ENST00000411005 70 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 RPL39P34-201ENST00000477141 156 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 RNU6-1018P-201ENST00000516577 106 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 RNU6-850P-201ENST00000516934 103 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 RNA5SP330-201ENST00000517096 96 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 RNU7-161P-201ENST00000517289 62 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 AC007012.1-201ENST00000567192 175 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 MIR4679-2-201ENST00000578358 77 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 U6.95-201ENST00000636931 70 ntBASIC0.38□□□□□ -2.35
USP44Q9H0E7 Y_RNA.115-201ENST00000363272 98 ntBASIC0.37□□□□□ -2.35
USP44Q9H0E7 SNORD38.2-201ENST00000384470 69 ntBASIC0.37□□□□□ -2.35
USP44Q9H0E7 MIR548A1-201ENST00000385041 97 ntBASIC0.37□□□□□ -2.35
USP44Q9H0E7 MIR599-201ENST00000385069 95 ntBASIC0.37□□□□□ -2.35
USP44Q9H0E7 AC097635.1-201ENST00000450678 155 ntBASIC0.37□□□□□ -2.35
USP44Q9H0E7 RNA5SP403-201ENST00000363598 108 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 MIR519A1-201ENST00000385257 85 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 MIR1912-201ENST00000410389 80 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 RNU2-59P-201ENST00000410482 191 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 TMSB4XP3-201ENST00000445144 114 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 AC069271.1-201ENST00000445577 156 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 RNU7-195P-201ENST00000458793 62 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 RNU7-106P-201ENST00000459514 67 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 RNU6-1333P-201ENST00000516162 93 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 MTND5P40-201ENST00000559945 246 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.36□□□□□ -2.35
USP44Q9H0E7 Y_RNA.35-201ENST00000362601 101 ntBASIC0.35□□□□□ -2.35
USP44Q9H0E7 Y_RNA.221-201ENST00000364248 96 ntBASIC0.35□□□□□ -2.35
USP44Q9H0E7 Y_RNA.353-201ENST00000365440 108 ntBASIC0.35□□□□□ -2.35
USP44Q9H0E7 RNU6-1201P-201ENST00000384227 107 ntBASIC0.35□□□□□ -2.35
USP44Q9H0E7 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
USP44Q9H0E7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.35□□□□□ -2.35
USP44Q9H0E7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.35□□□□□ -2.35
USP44Q9H0E7 SNORD38.1-201ENST00000363863 68 ntBASIC0.34□□□□□ -2.36
USP44Q9H0E7 RNU6-726P-201ENST00000364680 107 ntBASIC0.34□□□□□ -2.36
USP44Q9H0E7 Y_RNA.309-201ENST00000365046 111 ntBASIC0.34□□□□□ -2.36
USP44Q9H0E7 Y_RNA.342-201ENST00000365352 113 ntBASIC0.34□□□□□ -2.36
USP44Q9H0E7 RNU6-716P-201ENST00000365621 103 ntBASIC0.34□□□□□ -2.36
USP44Q9H0E7 MIR548A3-201ENST00000385297 97 ntBASIC0.34□□□□□ -2.36
USP44Q9H0E7 RNU7-104P-201ENST00000459398 79 ntBASIC0.34□□□□□ -2.36
USP44Q9H0E7 Y_RNA.809-201ENST00000516058 95 ntBASIC0.34□□□□□ -2.36
USP44Q9H0E7 Y_RNA.261-201ENST00000364631 102 ntBASIC0.33□□□□□ -2.36
USP44Q9H0E7 RNU6-1126P-201ENST00000384002 107 ntBASIC0.33□□□□□ -2.36
USP44Q9H0E7 Y_RNA.563-201ENST00000384707 108 ntBASIC0.33□□□□□ -2.36
USP44Q9H0E7 MIR516A2-201ENST00000384888 90 ntBASIC0.33□□□□□ -2.36
USP44Q9H0E7 MIR516A1-201ENST00000385033 90 ntBASIC0.33□□□□□ -2.36
USP44Q9H0E7 SPINT5P-201ENST00000448174 155 ntBASIC0.33□□□□□ -2.36
USP44Q9H0E7 AL442128.1-201ENST00000615151 90 ntBASIC0.33□□□□□ -2.36
USP44Q9H0E7 AL109933.3-201ENST00000619095 188 ntBASIC0.33□□□□□ -2.36
USP44Q9H0E7 RNU6-1260P-201ENST00000362944 107 ntBASIC0.32□□□□□ -2.36
USP44Q9H0E7 MIR548G-201ENST00000408442 89 ntBASIC0.32□□□□□ -2.36
USP44Q9H0E7 AL670379.3-201ENST00000605040 251 ntBASIC0.32□□□□□ -2.36
USP44Q9H0E7 RNU6-90P-201ENST00000606352 106 ntBASIC0.32□□□□□ -2.36
USP44Q9H0E7 Y_RNA.173-201ENST00000363776 113 ntBASIC0.31□□□□□ -2.36
USP44Q9H0E7 MIR577-201ENST00000385196 96 ntBASIC0.31□□□□□ -2.36
USP44Q9H0E7 AC108740.1-201ENST00000498629 225 ntBASIC0.31□□□□□ -2.36
USP44Q9H0E7 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms