Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.66□□□□□ -2.3
LITAFQ99732 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
LITAFQ99732 RNU4-38P-201ENST00000364472 129 ntBASIC0.65□□□□□ -2.31
LITAFQ99732 Y_RNA.290-201ENST00000364879 114 ntBASIC0.65□□□□□ -2.31
LITAFQ99732 MIR488-201ENST00000365739 83 ntBASIC0.65□□□□□ -2.31
LITAFQ99732 AC244505.6-201ENST00000452829 130 ntBASIC0.65□□□□□ -2.31
LITAFQ99732 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.65□□□□□ -2.31
LITAFQ99732 Y_RNA.809-201ENST00000516058 95 ntBASIC0.65□□□□□ -2.31
LITAFQ99732 MIR4421-201ENST00000578133 69 ntBASIC0.65□□□□□ -2.31
LITAFQ99732 MIR4303-201ENST00000581299 66 ntBASIC0.65□□□□□ -2.31
LITAFQ99732 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.65□□□□□ -2.31
LITAFQ99732 MALAT1.1-201ENST00000618249 95 ntBASIC0.65□□□□□ -2.31
LITAFQ99732 RNU6-1298P-201ENST00000362456 101 ntBASIC0.64□□□□□ -2.31
LITAFQ99732 RNU6-1260P-201ENST00000362944 107 ntBASIC0.64□□□□□ -2.31
LITAFQ99732 MIR599-201ENST00000385069 95 ntBASIC0.64□□□□□ -2.31
LITAFQ99732 MIR644A-201ENST00000385262 94 ntBASIC0.64□□□□□ -2.31
LITAFQ99732 RNU6-243P-201ENST00000391140 107 ntBASIC0.64□□□□□ -2.31
LITAFQ99732 RNY4P30-201ENST00000410216 95 ntBASIC0.64□□□□□ -2.31
LITAFQ99732 AL591806.2-201ENST00000433122 173 ntBASIC0.64□□□□□ -2.31
LITAFQ99732 AC097635.1-201ENST00000450678 155 ntBASIC0.64□□□□□ -2.31
LITAFQ99732 MIR4524B-201ENST00000581569 115 ntBASIC0.64□□□□□ -2.31
LITAFQ99732 SNORD116-10-201ENST00000363791 102 ntBASIC0.63□□□□□ -2.31
LITAFQ99732 Y_RNA.190-201ENST00000363964 101 ntBASIC0.63□□□□□ -2.31
LITAFQ99732 MIR608-201ENST00000384820 100 ntBASIC0.63□□□□□ -2.31
LITAFQ99732 MIR1289-2-201ENST00000408360 111 ntBASIC0.63□□□□□ -2.31
LITAFQ99732 ACA64.5-201ENST00000516207 127 ntBASIC0.63□□□□□ -2.31
LITAFQ99732 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.63□□□□□ -2.31
LITAFQ99732 MIR18A-201ENST00000362310 71 ntBASIC0.62□□□□□ -2.31
LITAFQ99732 RNU6-1131P-201ENST00000364955 107 ntBASIC0.62□□□□□ -2.31
LITAFQ99732 RPL39P28-201ENST00000465655 155 ntBASIC0.62□□□□□ -2.31
LITAFQ99732 RNU6-469P-201ENST00000516253 101 ntBASIC0.62□□□□□ -2.31
LITAFQ99732 RNA5SP170-201ENST00000517150 101 ntBASIC0.62□□□□□ -2.31
LITAFQ99732 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.62□□□□□ -2.31
LITAFQ99732 AC015712.3-201ENST00000559380 164 ntBASIC0.62□□□□□ -2.31
LITAFQ99732 MIR3678-201ENST00000578455 94 ntBASIC0.62□□□□□ -2.31
LITAFQ99732 Y_RNA.220-201ENST00000364244 109 ntBASIC0.61□□□□□ -2.31
LITAFQ99732 RNY1P7-201ENST00000384743 110 ntBASIC0.61□□□□□ -2.31
LITAFQ99732 RNA5SP222-201ENST00000411039 105 ntBASIC0.61□□□□□ -2.31
LITAFQ99732 snoU13.11-201ENST00000459219 104 ntBASIC0.61□□□□□ -2.31
LITAFQ99732 Y_RNA.648-201ENST00000459455 110 ntBASIC0.61□□□□□ -2.31
LITAFQ99732 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.61□□□□□ -2.31
LITAFQ99732 RNU6-135P-201ENST00000516769 101 ntBASIC0.61□□□□□ -2.31
LITAFQ99732 AL512598.1-201ENST00000610158 273 ntBASIC0.61□□□□□ -2.31
LITAFQ99732 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.61□□□□□ -2.31
LITAFQ99732 SNORD115-24-201ENST00000363528 82 ntBASIC0.6□□□□□ -2.31
LITAFQ99732 Y_RNA.221-201ENST00000364248 96 ntBASIC0.6□□□□□ -2.31
LITAFQ99732 RNU4-45P-201ENST00000365469 141 ntBASIC0.6□□□□□ -2.31
LITAFQ99732 RNU6-49P-201ENST00000384256 107 ntBASIC0.6□□□□□ -2.31
LITAFQ99732 RNU6-524P-201ENST00000384270 107 ntBASIC0.6□□□□□ -2.31
LITAFQ99732 snoU13.23-201ENST00000458863 104 ntBASIC0.6□□□□□ -2.31
LITAFQ99732 MIR5582-201ENST00000579697 68 ntBASIC0.6□□□□□ -2.31
LITAFQ99732 MIR4298-201ENST00000584380 73 ntBASIC0.6□□□□□ -2.31
LITAFQ99732 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.31
LITAFQ99732 RNU6-957P-201ENST00000363652 99 ntBASIC0.59□□□□□ -2.31
LITAFQ99732 SNORD18A-201ENST00000363753 72 ntBASIC0.59□□□□□ -2.31
LITAFQ99732 SNORD28-201ENST00000384706 75 ntBASIC0.59□□□□□ -2.31
LITAFQ99732 MIR146A-201ENST00000385201 99 ntBASIC0.59□□□□□ -2.31
LITAFQ99732 RNU6-482P-201ENST00000391068 107 ntBASIC0.59□□□□□ -2.31
LITAFQ99732 SNORA17.3-201ENST00000391159 129 ntBASIC0.59□□□□□ -2.31
LITAFQ99732 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.59□□□□□ -2.31
LITAFQ99732 MIR4639-201ENST00000584938 69 ntBASIC0.59□□□□□ -2.31
LITAFQ99732 AC211469.2-201ENST00000605461 205 ntBASIC0.59□□□□□ -2.31
LITAFQ99732 RNU1-17P-201ENST00000363022 152 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 RNA5SP403-201ENST00000363598 108 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 SNORD114-2-201ENST00000363953 78 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 Y_RNA.283-201ENST00000364798 112 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 RNU6-466P-201ENST00000391224 103 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 AL606490.4-201ENST00000423117 127 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 AL161932.1-201ENST00000437408 146 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 RNU7-85P-201ENST00000458851 63 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 RNA5SP458-201ENST00000516188 119 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 RNU6-844P-201ENST00000517175 102 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 RNU7-161P-201ENST00000517289 62 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 AC244669.1-204ENST00000621564 178 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 TRDV1-202ENST00000621643 102 ntBASIC0.58□□□□□ -2.32
LITAFQ99732 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.58□□□□□ -2.32
LITAFQ99732 MIR378A-201ENST00000362177 66 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 RNA5SP432-201ENST00000362480 116 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 RNA5SP99-201ENST00000364020 114 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 RNU6-1229P-201ENST00000364295 107 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 Y_RNA.369-201ENST00000365568 117 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 RNU6-519P-201ENST00000410590 108 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 Y_RNA.609-201ENST00000410669 89 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 RNU6-351P-201ENST00000516097 100 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 RNU6-1265P-201ENST00000516342 103 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 RNA5SP47-201ENST00000517230 109 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 AC026421.1-201ENST00000519101 163 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 AL353770.2-201ENST00000620024 78 ntBASIC0.57□□□□□ -2.32
LITAFQ99732 SNORA7.1-201ENST00000363750 139 ntBASIC0.56□□□□□ -2.32
LITAFQ99732 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
LITAFQ99732 SNORA36.2-201ENST00000384004 127 ntBASIC0.56□□□□□ -2.32
LITAFQ99732 SNORD4B-201ENST00000459083 72 ntBASIC0.56□□□□□ -2.32
LITAFQ99732 PSMC1P5-201ENST00000512850 177 ntBASIC0.56□□□□□ -2.32
LITAFQ99732 RNU6-75P-201ENST00000515944 104 ntBASIC0.56□□□□□ -2.32
LITAFQ99732 MIR4536-1-201ENST00000583537 88 ntBASIC0.56□□□□□ -2.32
LITAFQ99732 MIR6078-201ENST00000611069 100 ntBASIC0.56□□□□□ -2.32
LITAFQ99732 MIR337-201ENST00000362281 93 ntBASIC0.55□□□□□ -2.32
LITAFQ99732 Y_RNA.43-201ENST00000362670 111 ntBASIC0.55□□□□□ -2.32
LITAFQ99732 RNU6-1255P-201ENST00000363434 112 ntBASIC0.55□□□□□ -2.32
LITAFQ99732 RNU6-110P-201ENST00000384508 104 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms