Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 SNORD100-201ENST00000408573 76 ntBASIC1.16□□□□□ -2.22
TIMP4Q99727 RNU6-519P-201ENST00000410590 108 ntBASIC1.16□□□□□ -2.22
TIMP4Q99727 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
TIMP4Q99727 RNU6-675P-201ENST00000384236 104 ntBASIC1.15□□□□□ -2.23
TIMP4Q99727 MIR635-201ENST00000384830 98 ntBASIC1.15□□□□□ -2.23
TIMP4Q99727 Y_RNA.611-201ENST00000410682 108 ntBASIC1.15□□□□□ -2.23
TIMP4Q99727 SNORD63B-201ENST00000411005 70 ntBASIC1.15□□□□□ -2.23
TIMP4Q99727 RNU6-977P-201ENST00000516411 103 ntBASIC1.15□□□□□ -2.23
TIMP4Q99727 Y_RNA.697-201ENST00000516776 113 ntBASIC1.15□□□□□ -2.23
TIMP4Q99727 MIR6078-201ENST00000611069 100 ntBASIC1.15□□□□□ -2.23
TIMP4Q99727 MIR1245B-201ENST00000636115 69 ntBASIC1.15□□□□□ -2.23
TIMP4Q99727 MIR1-1-201ENST00000362147 71 ntBASIC1.14□□□□□ -2.23
TIMP4Q99727 RNU6-242P-201ENST00000384359 107 ntBASIC1.14□□□□□ -2.23
TIMP4Q99727 RNU6-1152P-201ENST00000384576 107 ntBASIC1.14□□□□□ -2.23
TIMP4Q99727 Y_RNA.536-201ENST00000384621 113 ntBASIC1.14□□□□□ -2.23
TIMP4Q99727 RNU6-243P-201ENST00000391140 107 ntBASIC1.14□□□□□ -2.23
TIMP4Q99727 RNU6-1254P-201ENST00000391266 104 ntBASIC1.14□□□□□ -2.23
TIMP4Q99727 MIR938-201ENST00000401216 83 ntBASIC1.14□□□□□ -2.23
TIMP4Q99727 AC002429.1-201ENST00000437672 148 ntBASIC1.14□□□□□ -2.23
TIMP4Q99727 MIR8070-201ENST00000616510 88 ntBASIC1.14□□□□□ -2.23
TIMP4Q99727 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
TIMP4Q99727 SNORD115-27-201ENST00000364430 82 ntBASIC1.13□□□□□ -2.23
TIMP4Q99727 MIR150-201ENST00000385048 84 ntBASIC1.13□□□□□ -2.23
TIMP4Q99727 AL161932.1-201ENST00000437408 146 ntBASIC1.13□□□□□ -2.23
TIMP4Q99727 snoU13.11-201ENST00000459219 104 ntBASIC1.13□□□□□ -2.23
TIMP4Q99727 TRAJ51-201ENST00000504127 63 ntBASIC1.13□□□□□ -2.23
TIMP4Q99727 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.13□□□□□ -2.23
TIMP4Q99727 Y_RNA.42-201ENST00000362660 108 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 SNORD36A-201ENST00000362874 73 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 RNU4-32P-201ENST00000363404 141 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 RNA5SP247-201ENST00000411181 105 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 AC067940.1-201ENST00000458411 300 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 RNU7-195P-201ENST00000458793 62 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 RNU7-102P-201ENST00000458948 62 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 MIR548H5-201ENST00000580314 60 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 MIR5588-201ENST00000581890 63 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 MIR548BB-201ENST00000626714 66 ntBASIC1.12□□□□□ -2.23
TIMP4Q99727 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TIMP4Q99727 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
TIMP4Q99727 RNU6-369P-201ENST00000362515 102 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 RNU6-633P-201ENST00000362612 103 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 Y_RNA.56-201ENST00000362798 112 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 RNU6-509P-201ENST00000363519 107 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 RNU6-1276P-201ENST00000365372 104 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 MIR520F-201ENST00000384824 87 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 AC092628.1-201ENST00000436250 252 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 SNORD4B-201ENST00000459083 72 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 AC019288.1-201ENST00000557918 224 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 MIR4804-201ENST00000581683 73 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 SNORD92-201ENST00000585078 85 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 AC008608.1-201ENST00000603910 127 ntBASIC1.11□□□□□ -2.23
TIMP4Q99727 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TIMP4Q99727 RNU6-535P-201ENST00000384722 107 ntBASIC1.1□□□□□ -2.23
TIMP4Q99727 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
TIMP4Q99727 RNU1-119P-201ENST00000391122 165 ntBASIC1.1□□□□□ -2.23
TIMP4Q99727 RNU7-56P-201ENST00000458744 62 ntBASIC1.1□□□□□ -2.23
TIMP4Q99727 RNU7-85P-201ENST00000458851 63 ntBASIC1.1□□□□□ -2.23
TIMP4Q99727 RNU6-765P-201ENST00000516916 99 ntBASIC1.1□□□□□ -2.23
TIMP4Q99727 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.1□□□□□ -2.23
TIMP4Q99727 MIR4536-1-201ENST00000583537 88 ntBASIC1.1□□□□□ -2.23
TIMP4Q99727 Y_RNA.226-201ENST00000364337 114 ntBASIC1.09□□□□□ -2.23
TIMP4Q99727 RNU6-979P-201ENST00000383896 107 ntBASIC1.09□□□□□ -2.23
TIMP4Q99727 Y_RNA.648-201ENST00000459455 110 ntBASIC1.09□□□□□ -2.23
TIMP4Q99727 RNU6-448P-201ENST00000517052 107 ntBASIC1.09□□□□□ -2.23
TIMP4Q99727 RNU7-10P-201ENST00000607194 63 ntBASIC1.09□□□□□ -2.23
TIMP4Q99727 RNA5SP245-201ENST00000364239 121 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 SNORA25.9-201ENST00000365087 128 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 Y_RNA.426-201ENST00000384068 113 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 RNU6-524P-201ENST00000384270 107 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 MIR519C-201ENST00000385053 87 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 SNORD89-201ENST00000390981 114 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 Y_RNA.809-201ENST00000516058 95 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 RNU6-65P-201ENST00000516332 98 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 RNU7-153P-201ENST00000516455 62 ntBASIC1.08□□□□□ -2.24
TIMP4Q99727 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.08□□□□□ -2.24
TIMP4Q99727 RNU6-957P-201ENST00000363652 99 ntBASIC1.07□□□□□ -2.24
TIMP4Q99727 Y_RNA.437-201ENST00000384113 113 ntBASIC1.07□□□□□ -2.24
TIMP4Q99727 RNU6-1124P-201ENST00000384169 107 ntBASIC1.07□□□□□ -2.24
TIMP4Q99727 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
TIMP4Q99727 RNU6-291P-201ENST00000384720 107 ntBASIC1.07□□□□□ -2.24
TIMP4Q99727 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
TIMP4Q99727 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TIMP4Q99727 RNU6-466P-201ENST00000391224 103 ntBASIC1.07□□□□□ -2.24
TIMP4Q99727 MIR1287-201ENST00000408492 90 ntBASIC1.07□□□□□ -2.24
TIMP4Q99727 MIR1276-201ENST00000408707 83 ntBASIC1.07□□□□□ -2.24
TIMP4Q99727 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
TIMP4Q99727 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
TIMP4Q99727 Y_RNA.219-201ENST00000364232 113 ntBASIC1.06□□□□□ -2.24
TIMP4Q99727 Y_RNA.283-201ENST00000364798 112 ntBASIC1.06□□□□□ -2.24
TIMP4Q99727 SNORD78.1-201ENST00000390866 65 ntBASIC1.06□□□□□ -2.24
TIMP4Q99727 MIR1827-201ENST00000408549 66 ntBASIC1.06□□□□□ -2.24
TIMP4Q99727 RNA5SP102-201ENST00000516865 106 ntBASIC1.06□□□□□ -2.24
TIMP4Q99727 AP003327.1-201ENST00000529684 127 ntBASIC1.06□□□□□ -2.24
TIMP4Q99727 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
TIMP4Q99727 AC006160.2-201ENST00000637708 154 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms