Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC025166.1-201ENST00000612411 163 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 MIR376B-201ENST00000614515 100 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 AP001362.1-201ENST00000625165 124 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 MTND5P18-201ENST00000445624 1801 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 Y_RNA.56-201ENST00000362798 112 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 Y_RNA.127-201ENST00000363386 109 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 SNORA2A-201ENST00000383885 135 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 BX276092.1-201ENST00000427368 251 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 RNU6-772P-201ENST00000516042 105 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 RNA5SP227-201ENST00000516184 113 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 Y_RNA.703-201ENST00000516846 111 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 MIR548H5-201ENST00000580314 60 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.45□□□□□ -2.34
USP38Q8NB14 Y_RNA.344-201ENST00000365381 112 ntBASIC0.44□□□□□ -2.34
USP38Q8NB14 RNU6-746P-201ENST00000384112 109 ntBASIC0.44□□□□□ -2.34
USP38Q8NB14 MIR34C-201ENST00000384831 77 ntBASIC0.44□□□□□ -2.34
USP38Q8NB14 AC244669.1-204ENST00000621564 178 ntBASIC0.44□□□□□ -2.34
USP38Q8NB14 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
USP38Q8NB14 Y_RNA.218-201ENST00000364218 104 ntBASIC0.43□□□□□ -2.34
USP38Q8NB14 SNORD28-201ENST00000384706 75 ntBASIC0.43□□□□□ -2.34
USP38Q8NB14 MIR548D2-201ENST00000384955 97 ntBASIC0.43□□□□□ -2.34
USP38Q8NB14 MIR4639-201ENST00000584938 69 ntBASIC0.43□□□□□ -2.34
USP38Q8NB14 SNORD115-24-201ENST00000363528 82 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 MIR635-201ENST00000384830 98 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 RNA5SP299-201ENST00000391203 116 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 RNA5SP47-201ENST00000517230 109 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 AC138869.1-201ENST00000568623 124 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 RNU7-10P-201ENST00000607194 63 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 MIR103A1-201ENST00000362165 78 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 SNORD118-201ENST00000363593 134 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 RNU6-704P-201ENST00000364162 103 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 Y_RNA.360-201ENST00000365512 102 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 MIR539-201ENST00000365690 78 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 SNORA7.5-201ENST00000410672 110 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 TRAJ51-201ENST00000504127 63 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 SCARNA16.5-201ENST00000517114 183 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 MIR5190-201ENST00000581537 80 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 AL157777.2-201ENST00000258070 137 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 Y_RNA.71-201ENST00000362892 104 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 SNORD50.2-201ENST00000365465 70 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 MIR548L-201ENST00000408303 86 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 AL353813.1-201ENST00000440700 253 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 AC091304.10-201ENST00000641554 121 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 SNORD44.1-201ENST00000363202 61 ntBASIC0.39□□□□□ -2.35
USP38Q8NB14 RNU6-30P-201ENST00000384561 107 ntBASIC0.39□□□□□ -2.35
USP38Q8NB14 MIR7107-201ENST00000611489 80 ntBASIC0.39□□□□□ -2.35
USP38Q8NB14 MIR6828-201ENST00000636181 60 ntBASIC0.39□□□□□ -2.35
USP38Q8NB14 RNU6-363P-201ENST00000362895 105 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 RNU6-80P-201ENST00000384195 107 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 Z95118.1-201ENST00000421372 247 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 SNRPGP12-201ENST00000449481 213 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 AC244505.6-201ENST00000452829 130 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 AL512310.12-203ENST00000640543 90 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.38□□□□□ -2.35
USP38Q8NB14 RNY4P6-201ENST00000363667 96 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 Y_RNA.247-201ENST00000364500 92 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 Y_RNA.346-201ENST00000365385 112 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 AC069271.1-201ENST00000445577 156 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 RNU6-659P-201ENST00000516454 104 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 MTND5P40-201ENST00000559945 246 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 Y_RNA.221-201ENST00000364248 96 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 Y_RNA.362-201ENST00000365518 110 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 RNU7-104P-201ENST00000459398 79 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 RNU6-1006P-201ENST00000516998 103 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 RNU7-161P-201ENST00000517289 62 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 MIR3914-2-201ENST00000637339 95 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 Y_RNA.155-201ENST00000363632 101 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 SNORD38.2-201ENST00000384470 69 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 MIR599-201ENST00000385069 95 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 MIR548M-201ENST00000408260 86 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 RNU2-59P-201ENST00000410482 191 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 RNU7-106P-201ENST00000459514 67 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 Y_RNA.712-201ENST00000517011 92 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 AL035470.1-201ENST00000622571 220 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 MIR409-201ENST00000362237 79 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-1099P-201ENST00000363533 107 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 Y_RNA.423-201ENST00000384057 113 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-816P-201ENST00000390914 107 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-1268P-201ENST00000391214 107 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-1239P-201ENST00000391310 107 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 MIR548I2-201ENST00000408348 149 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 SNORD63B-201ENST00000411005 70 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 AC073261.1-201ENST00000429409 121 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU7-195P-201ENST00000458793 62 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 SNORD33.1-201ENST00000516213 88 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-850P-201ENST00000516934 103 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-1313P-201ENST00000362622 102 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 RNU6-409P-201ENST00000384114 104 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 Y_RNA.507-201ENST00000384500 99 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 MIR548A1-201ENST00000385041 97 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 RNU6-758P-201ENST00000516292 89 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.33□□□□□ -2.36
USP38Q8NB14 AL162726.3-218ENST00000636401 95 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 RNA5SP403-201ENST00000363598 108 ntBASIC0.32□□□□□ -2.36
USP38Q8NB14 RNU6-726P-201ENST00000364680 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms