Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 snoU13.15-201ENST00000459407 104 ntBASIC0.93□□□□□ -2.26
LYSMD2Q8IV50 Y_RNA.648-201ENST00000459455 110 ntBASIC0.93□□□□□ -2.26
LYSMD2Q8IV50 MIR4295-201ENST00000585286 85 ntBASIC0.93□□□□□ -2.26
LYSMD2Q8IV50 AC025521.1-201ENST00000621624 286 ntBASIC0.93□□□□□ -2.26
LYSMD2Q8IV50 RNA5SP245-201ENST00000364239 121 ntBASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 MIR1289-2-201ENST00000408360 111 ntBASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 RNY4P30-201ENST00000410216 95 ntBASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 MIR4421-201ENST00000578133 69 ntBASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 RNU6-110P-201ENST00000384508 104 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 RNA5SP222-201ENST00000411039 105 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 RNU6-162P-201ENST00000516228 103 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 MIR4639-201ENST00000584938 69 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 MIR18A-201ENST00000362310 71 ntBASIC0.9□□□□□ -2.27
LYSMD2Q8IV50 BTF3P4-201ENST00000418852 495 ntBASIC0.9□□□□□ -2.27
LYSMD2Q8IV50 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.9□□□□□ -2.27
LYSMD2Q8IV50 MIR3678-201ENST00000578455 94 ntBASIC0.9□□□□□ -2.27
LYSMD2Q8IV50 SNORD115-24-201ENST00000363528 82 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 RNU6-524P-201ENST00000384270 107 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 MIR644A-201ENST00000385262 94 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 RNU6-519P-201ENST00000410590 108 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 RNA5SP170-201ENST00000517150 101 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 Y_RNA.290-201ENST00000364879 114 ntBASIC0.88□□□□□ -2.27
LYSMD2Q8IV50 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
LYSMD2Q8IV50 RNU6-65P-201ENST00000516332 98 ntBASIC0.88□□□□□ -2.27
LYSMD2Q8IV50 Y_RNA.221-201ENST00000364248 96 ntBASIC0.87□□□□□ -2.27
LYSMD2Q8IV50 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
LYSMD2Q8IV50 MIR4536-1-201ENST00000583537 88 ntBASIC0.87□□□□□ -2.27
LYSMD2Q8IV50 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.87□□□□□ -2.27
LYSMD2Q8IV50 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
LYSMD2Q8IV50 SNORD28-201ENST00000384706 75 ntBASIC0.86□□□□□ -2.27
LYSMD2Q8IV50 RNA5SP432-201ENST00000362480 116 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 RNU1-17P-201ENST00000363022 152 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 SNORA7.1-201ENST00000363750 139 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 SNORD115-44-201ENST00000365391 82 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 Y_RNA.369-201ENST00000365568 117 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 AL161932.1-201ENST00000437408 146 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 AC067863.3-201ENST00000624172 122 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 SNORD18A-201ENST00000363753 72 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 Y_RNA.283-201ENST00000364798 112 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 RNU6-1131P-201ENST00000364955 107 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 SNORA36.2-201ENST00000384004 127 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 SNORA17.3-201ENST00000391159 129 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 AL353770.2-201ENST00000620024 78 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 TRDV1-202ENST00000621643 102 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 Y_RNA.4-201ENST00000362333 112 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 RNA5SP403-201ENST00000363598 108 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 Y_RNA.190-201ENST00000363964 101 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 MIR488-201ENST00000365739 83 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 SNORD116-22-201ENST00000384430 92 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 RNU4-62P-201ENST00000410125 130 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 snoU13.11-201ENST00000459219 104 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 RPL23AP94-201ENST00000512518 302 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 RNU7-13P-201ENST00000516413 62 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 SCARNA16.5-201ENST00000517114 183 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 AC244669.1-204ENST00000621564 178 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 RNU6-957P-201ENST00000363652 99 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 RNU4-38P-201ENST00000364472 129 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 MIR548L-201ENST00000408303 86 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 Y_RNA.609-201ENST00000410669 89 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 RNU7-74P-201ENST00000459104 62 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 RNU6-844P-201ENST00000517175 102 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 RNA5SP47-201ENST00000517230 109 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 MIR140-201ENST00000385282 100 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 MIR548U-201ENST00000390728 81 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 Y_RNA.596-201ENST00000410462 109 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 RNU7-95P-201ENST00000459222 64 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 RNU7-104P-201ENST00000459398 79 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 AC026421.1-201ENST00000519101 163 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 MIR5582-201ENST00000579697 68 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 SNORD4B-201ENST00000459083 72 ntBASIC0.8□□□□□ -2.28
LYSMD2Q8IV50 RNU6-1265P-201ENST00000516342 103 ntBASIC0.8□□□□□ -2.28
LYSMD2Q8IV50 RNU6-548P-201ENST00000517083 115 ntBASIC0.8□□□□□ -2.28
LYSMD2Q8IV50 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
LYSMD2Q8IV50 RNU6-1298P-201ENST00000362456 101 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 Y_RNA.43-201ENST00000362670 111 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 RNU6-1134P-201ENST00000365156 101 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 snoU13.26-201ENST00000459452 105 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 RNA5SP94-201ENST00000516917 108 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 RNU7-161P-201ENST00000517289 62 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 RNU6-294P-201ENST00000364999 102 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 RNY1P7-201ENST00000384743 110 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 RNA5SP227-201ENST00000516184 113 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 RNU6-1057P-201ENST00000517162 102 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 AC006254.2-201ENST00000603259 279 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 AL590095.2-201ENST00000604136 117 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 AC092634.7-201ENST00000621022 103 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
LYSMD2Q8IV50 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms