Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RNU6-65P-201ENST00000516332 98 ntBASIC1.45□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNU6-977P-201ENST00000516411 103 ntBASIC1.45□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNU6-448P-201ENST00000517052 107 ntBASIC1.45□□□□□ -2.18
HLA-DQA1Q5Y7H0 MIR4804-201ENST00000581683 73 ntBASIC1.45□□□□□ -2.18
HLA-DQA1Q5Y7H0 MIR4781-201ENST00000585250 76 ntBASIC1.45□□□□□ -2.18
HLA-DQA1Q5Y7H0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.45□□□□□ -2.18
HLA-DQA1Q5Y7H0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.45□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 SNORD115-37-201ENST00000363768 82 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 Y_RNA.508-201ENST00000384502 114 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 MIR222-201ENST00000384992 110 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 MIR100-201ENST00000385259 80 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 AC002429.1-201ENST00000437672 148 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNU6-75P-201ENST00000515944 104 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 Y_RNA.809-201ENST00000516058 95 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 AC008608.1-201ENST00000603910 127 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNU7-10P-201ENST00000607194 63 ntBASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.44□□□□□ -2.18
HLA-DQA1Q5Y7H0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 MIR1-1-201ENST00000362147 71 ntBASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNA5SP245-201ENST00000364239 121 ntBASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNA5SP363-201ENST00000365072 115 ntBASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 Y_RNA.316-201ENST00000365118 111 ntBASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNU6-466P-201ENST00000391224 103 ntBASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNU7-56P-201ENST00000458744 62 ntBASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 AC140658.3-201ENST00000567603 271 ntBASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.43□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNU6-132P-201ENST00000383863 107 ntBASIC1.42□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNU6-535P-201ENST00000384722 107 ntBASIC1.42□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNA5SP292-201ENST00000390974 118 ntBASIC1.42□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNU6-482P-201ENST00000391068 107 ntBASIC1.42□□□□□ -2.18
HLA-DQA1Q5Y7H0 SNORA25.13-201ENST00000516395 103 ntBASIC1.42□□□□□ -2.18
HLA-DQA1Q5Y7H0 AL157834.3-201ENST00000615543 103 ntBASIC1.42□□□□□ -2.18
HLA-DQA1Q5Y7H0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNA5SP99-201ENST00000364020 114 ntBASIC1.41□□□□□ -2.18
HLA-DQA1Q5Y7H0 RNU6-291P-201ENST00000384720 107 ntBASIC1.41□□□□□ -2.18
HLA-DQA1Q5Y7H0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DQA1Q5Y7H0 AL606490.4-201ENST00000423117 127 ntBASIC1.41□□□□□ -2.18
HLA-DQA1Q5Y7H0 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
HLA-DQA1Q5Y7H0 MIRLET7F1-201ENST00000362202 87 ntBASIC1.4□□□□□ -2.19
HLA-DQA1Q5Y7H0 RNU1-42P-201ENST00000364033 160 ntBASIC1.4□□□□□ -2.19
HLA-DQA1Q5Y7H0 RNU6-811P-201ENST00000384069 107 ntBASIC1.4□□□□□ -2.19
HLA-DQA1Q5Y7H0 SNORA25-201ENST00000384384 134 ntBASIC1.4□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR520F-201ENST00000384824 87 ntBASIC1.4□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR519A1-201ENST00000385257 85 ntBASIC1.4□□□□□ -2.19
HLA-DQA1Q5Y7H0 SNORD12-201ENST00000391002 90 ntBASIC1.4□□□□□ -2.19
HLA-DQA1Q5Y7H0 RNU1-119P-201ENST00000391122 165 ntBASIC1.4□□□□□ -2.19
HLA-DQA1Q5Y7H0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.4□□□□□ -2.19
HLA-DQA1Q5Y7H0 RNU6-1260P-201ENST00000362944 107 ntBASIC1.39□□□□□ -2.19
HLA-DQA1Q5Y7H0 RNU6-279P-201ENST00000391297 101 ntBASIC1.39□□□□□ -2.19
HLA-DQA1Q5Y7H0 RNU6-857P-201ENST00000515893 110 ntBASIC1.39□□□□□ -2.19
HLA-DQA1Q5Y7H0 SNORA18.5-201ENST00000516616 101 ntBASIC1.39□□□□□ -2.19
HLA-DQA1Q5Y7H0 AC138907.6-201ENST00000568401 126 ntBASIC1.39□□□□□ -2.19
HLA-DQA1Q5Y7H0 AC138869.1-201ENST00000568623 124 ntBASIC1.39□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR4796-201ENST00000580742 81 ntBASIC1.39□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR599-201ENST00000385069 95 ntBASIC1.38□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR1827-201ENST00000408549 66 ntBASIC1.38□□□□□ -2.19
HLA-DQA1Q5Y7H0 AC067940.1-201ENST00000458411 300 ntBASIC1.38□□□□□ -2.19
HLA-DQA1Q5Y7H0 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR3064-201ENST00000581130 66 ntBASIC1.38□□□□□ -2.19
HLA-DQA1Q5Y7H0 TRDV1-202ENST00000621643 102 ntBASIC1.38□□□□□ -2.19
HLA-DQA1Q5Y7H0 Y_RNA.94-201ENST00000363068 106 ntBASIC1.37□□□□□ -2.19
HLA-DQA1Q5Y7H0 Y_RNA.244-201ENST00000364484 109 ntBASIC1.37□□□□□ -2.19
HLA-DQA1Q5Y7H0 RNU6-997P-201ENST00000384725 107 ntBASIC1.37□□□□□ -2.19
HLA-DQA1Q5Y7H0 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
HLA-DQA1Q5Y7H0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DQA1Q5Y7H0 AC097635.1-201ENST00000450678 155 ntBASIC1.37□□□□□ -2.19
HLA-DQA1Q5Y7H0 AC104996.3-201ENST00000590718 94 ntBASIC1.37□□□□□ -2.19
HLA-DQA1Q5Y7H0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HLA-DQA1Q5Y7H0 AL450471.1-201ENST00000447509 127 ntBASIC1.36□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR4769-201ENST00000584126 77 ntBASIC1.36□□□□□ -2.19
HLA-DQA1Q5Y7H0 RMST_2.1-201ENST00000617263 136 ntBASIC1.36□□□□□ -2.19
HLA-DQA1Q5Y7H0 Y_RNA.221-201ENST00000364248 96 ntBASIC1.35□□□□□ -2.19
HLA-DQA1Q5Y7H0 Y_RNA.491-201ENST00000384417 107 ntBASIC1.35□□□□□ -2.19
HLA-DQA1Q5Y7H0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HLA-DQA1Q5Y7H0 SNORD89-201ENST00000390981 114 ntBASIC1.35□□□□□ -2.19
HLA-DQA1Q5Y7H0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
HLA-DQA1Q5Y7H0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
HLA-DQA1Q5Y7H0 U6.100-201ENST00000636230 99 ntBASIC1.35□□□□□ -2.19
HLA-DQA1Q5Y7H0 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR518E-201ENST00000385252 88 ntBASIC1.34□□□□□ -2.19
HLA-DQA1Q5Y7H0 MIR548U-201ENST00000390728 81 ntBASIC1.34□□□□□ -2.19
HLA-DQA1Q5Y7H0 SNORA31.14-201ENST00000516728 116 ntBASIC1.34□□□□□ -2.19
HLA-DQA1Q5Y7H0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.33□□□□□ -2.2
HLA-DQA1Q5Y7H0 RNU6-624P-201ENST00000363411 107 ntBASIC1.33□□□□□ -2.2
HLA-DQA1Q5Y7H0 RNU6-478P-201ENST00000363904 110 ntBASIC1.33□□□□□ -2.2
HLA-DQA1Q5Y7H0 RNU6-24P-201ENST00000384440 107 ntBASIC1.33□□□□□ -2.2
HLA-DQA1Q5Y7H0 MIR520H-201ENST00000385126 88 ntBASIC1.33□□□□□ -2.2
HLA-DQA1Q5Y7H0 SNORD90-201ENST00000391145 111 ntBASIC1.33□□□□□ -2.2
HLA-DQA1Q5Y7H0 AC108667.1-201ENST00000428618 249 ntBASIC1.33□□□□□ -2.2
HLA-DQA1Q5Y7H0 MIR4712-201ENST00000583750 82 ntBASIC1.33□□□□□ -2.2
HLA-DQA1Q5Y7H0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HLA-DQA1Q5Y7H0 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
HLA-DQA1Q5Y7H0 RNU6-129P-201ENST00000391022 107 ntBASIC1.32□□□□□ -2.2
HLA-DQA1Q5Y7H0 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms