Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 Y_RNA.13-201ENST00000362403 112 ntBASIC1.85□□□□□ -2.11
USP11P51784 MIR548U-201ENST00000390728 81 ntBASIC1.85□□□□□ -2.11
USP11P51784 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
USP11P51784 MIR4484-201ENST00000582855 83 ntBASIC1.85□□□□□ -2.11
USP11P51784 MIR6082-201ENST00000613604 109 ntBASIC1.85□□□□□ -2.11
USP11P51784 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.85□□□□□ -2.11
USP11P51784 MIR378A-201ENST00000362177 66 ntBASIC1.84□□□□□ -2.11
USP11P51784 MIR519A1-201ENST00000385257 85 ntBASIC1.84□□□□□ -2.11
USP11P51784 SNORD77.2-201ENST00000391045 68 ntBASIC1.84□□□□□ -2.11
USP11P51784 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.84□□□□□ -2.11
USP11P51784 snoU13.17-201ENST00000458802 104 ntBASIC1.84□□□□□ -2.11
USP11P51784 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
USP11P51784 AC114801.3-201ENST00000510231 177 ntBASIC1.84□□□□□ -2.11
USP11P51784 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.84□□□□□ -2.11
USP11P51784 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USP11P51784 SNORA67.5-201ENST00000391036 107 ntBASIC1.83□□□□□ -2.12
USP11P51784 AC092628.1-201ENST00000436250 252 ntBASIC1.83□□□□□ -2.12
USP11P51784 AC036111.3-201ENST00000526389 112 ntBASIC1.83□□□□□ -2.12
USP11P51784 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
USP11P51784 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
USP11P51784 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.83□□□□□ -2.12
USP11P51784 snoU13.31-201ENST00000607291 104 ntBASIC1.83□□□□□ -2.12
USP11P51784 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
USP11P51784 MIR101-2-201ENST00000362195 79 ntBASIC1.82□□□□□ -2.12
USP11P51784 Y_RNA.56-201ENST00000362798 112 ntBASIC1.82□□□□□ -2.12
USP11P51784 SNORA25.9-201ENST00000365087 128 ntBASIC1.82□□□□□ -2.12
USP11P51784 AC048334.1-201ENST00000477975 159 ntBASIC1.82□□□□□ -2.12
USP11P51784 MIR548H5-201ENST00000580314 60 ntBASIC1.82□□□□□ -2.12
USP11P51784 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USP11P51784 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
USP11P51784 RNU6-208P-201ENST00000362431 107 ntBASIC1.81□□□□□ -2.12
USP11P51784 RNU6-1260P-201ENST00000362944 107 ntBASIC1.81□□□□□ -2.12
USP11P51784 MIR1257-201ENST00000408490 117 ntBASIC1.81□□□□□ -2.12
USP11P51784 RNU6-1054P-201ENST00000411293 104 ntBASIC1.81□□□□□ -2.12
USP11P51784 AC008834.1-201ENST00000511612 175 ntBASIC1.81□□□□□ -2.12
USP11P51784 Y_RNA.809-201ENST00000516058 95 ntBASIC1.81□□□□□ -2.12
USP11P51784 RNU6-1015P-201ENST00000517121 99 ntBASIC1.81□□□□□ -2.12
USP11P51784 AL512310.8-201ENST00000550183 120 ntBASIC1.81□□□□□ -2.12
USP11P51784 TRDV1-202ENST00000621643 102 ntBASIC1.81□□□□□ -2.12
USP11P51784 MIR664A-201ENST00000626086 82 ntBASIC1.81□□□□□ -2.12
USP11P51784 SNORD113.3-201ENST00000364630 78 ntBASIC1.8□□□□□ -2.12
USP11P51784 RNU6-934P-201ENST00000365154 107 ntBASIC1.8□□□□□ -2.12
USP11P51784 Y_RNA.363-201ENST00000365529 113 ntBASIC1.8□□□□□ -2.12
USP11P51784 SNORA75.2-201ENST00000391138 150 ntBASIC1.8□□□□□ -2.12
USP11P51784 SNORA75.3-201ENST00000391231 150 ntBASIC1.8□□□□□ -2.12
USP11P51784 RNU6-380P-201ENST00000410207 107 ntBASIC1.8□□□□□ -2.12
USP11P51784 AC074348.1-201ENST00000426503 132 ntBASIC1.8□□□□□ -2.12
USP11P51784 Y_RNA.697-201ENST00000516776 113 ntBASIC1.8□□□□□ -2.12
USP11P51784 RNU6-448P-201ENST00000517052 107 ntBASIC1.8□□□□□ -2.12
USP11P51784 MIR4781-201ENST00000585250 76 ntBASIC1.8□□□□□ -2.12
USP11P51784 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.79□□□□□ -2.12
USP11P51784 Y_RNA.42-201ENST00000362660 108 ntBASIC1.79□□□□□ -2.12
USP11P51784 Y_RNA.330-201ENST00000365230 109 ntBASIC1.79□□□□□ -2.12
USP11P51784 RNU6-411P-201ENST00000384451 107 ntBASIC1.79□□□□□ -2.12
USP11P51784 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
USP11P51784 U6.100-201ENST00000636230 99 ntBASIC1.79□□□□□ -2.12
USP11P51784 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USP11P51784 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
USP11P51784 Y_RNA.264-201ENST00000364665 102 ntBASIC1.78□□□□□ -2.12
USP11P51784 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
USP11P51784 RNU6-1051P-201ENST00000365471 102 ntBASIC1.78□□□□□ -2.12
USP11P51784 MIR125B2-201ENST00000385128 89 ntBASIC1.78□□□□□ -2.12
USP11P51784 RNU6-687P-201ENST00000516443 89 ntBASIC1.78□□□□□ -2.12
USP11P51784 RNU6-765P-201ENST00000516916 99 ntBASIC1.78□□□□□ -2.12
USP11P51784 MIR4696-201ENST00000581431 70 ntBASIC1.78□□□□□ -2.12
USP11P51784 RNA5SP245-201ENST00000364239 121 ntBASIC1.77□□□□□ -2.13
USP11P51784 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USP11P51784 RNU6-1065P-201ENST00000384513 106 ntBASIC1.77□□□□□ -2.13
USP11P51784 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
USP11P51784 RNU6-70P-201ENST00000516438 60 ntBASIC1.77□□□□□ -2.13
USP11P51784 RNU6-303P-201ENST00000517091 106 ntBASIC1.77□□□□□ -2.13
USP11P51784 MIR4771-2-201ENST00000577758 74 ntBASIC1.77□□□□□ -2.13
USP11P51784 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
USP11P51784 MIR4771-1-201ENST00000582617 74 ntBASIC1.77□□□□□ -2.13
USP11P51784 AL645939.4-201ENST00000604495 135 ntBASIC1.77□□□□□ -2.13
USP11P51784 RNU7-10P-201ENST00000607194 63 ntBASIC1.77□□□□□ -2.13
USP11P51784 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USP11P51784 RNU6-664P-201ENST00000362381 107 ntBASIC1.76□□□□□ -2.13
USP11P51784 Y_RNA.12-201ENST00000362393 112 ntBASIC1.76□□□□□ -2.13
USP11P51784 SNORD33-201ENST00000362761 85 ntBASIC1.76□□□□□ -2.13
USP11P51784 MIR517C-201ENST00000385103 95 ntBASIC1.76□□□□□ -2.13
USP11P51784 RNU4-62P-201ENST00000410125 130 ntBASIC1.76□□□□□ -2.13
USP11P51784 RPS27P16-201ENST00000425758 201 ntBASIC1.76□□□□□ -2.13
USP11P51784 MIR3140-201ENST00000583685 90 ntBASIC1.76□□□□□ -2.13
USP11P51784 MTRNR2L2-201ENST00000604882 87 ntBASIC1.76□□□□□ -2.13
USP11P51784 MIR1297-201ENST00000637311 77 ntBASIC1.76□□□□□ -2.13
USP11P51784 Y_RNA.207-201ENST00000364142 106 ntBASIC1.75□□□□□ -2.13
USP11P51784 Y_RNA.226-201ENST00000364337 114 ntBASIC1.75□□□□□ -2.13
USP11P51784 AP1B1P2-201ENST00000416196 106 ntBASIC1.75□□□□□ -2.13
USP11P51784 RNU6-807P-201ENST00000516805 107 ntBASIC1.75□□□□□ -2.13
USP11P51784 RNU7-156P-201ENST00000517214 74 ntBASIC1.75□□□□□ -2.13
USP11P51784 SNORD53B-201ENST00000577887 78 ntBASIC1.75□□□□□ -2.13
USP11P51784 YWHAEP2-201ENST00000580066 112 ntBASIC1.75□□□□□ -2.13
USP11P51784 YWHAEP3-201ENST00000582767 121 ntBASIC1.75□□□□□ -2.13
USP11P51784 BX248123.2-201ENST00000606318 124 ntBASIC1.75□□□□□ -2.13
USP11P51784 ZNF209P-201ENST00000593450 2304 ntBASIC1.75□□□□□ -2.13
USP11P51784 MIR337-201ENST00000362281 93 ntBASIC1.74□□□□□ -2.13
USP11P51784 RNU6-369P-201ENST00000362515 102 ntBASIC1.74□□□□□ -2.13
USP11P51784 RNU6-330P-201ENST00000363015 107 ntBASIC1.74□□□□□ -2.13
USP11P51784 Y_RNA.239-201ENST00000364444 113 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms