Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 MIR499A-201ENST00000384903 122 ntBASIC1.88□□□□□ -2.11
PTPRAP18433 SNORA75.2-201ENST00000391138 150 ntBASIC1.88□□□□□ -2.11
PTPRAP18433 SNORA75.3-201ENST00000391231 150 ntBASIC1.88□□□□□ -2.11
PTPRAP18433 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
PTPRAP18433 RNU7-195P-201ENST00000458793 62 ntBASIC1.88□□□□□ -2.11
PTPRAP18433 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.88□□□□□ -2.11
PTPRAP18433 SNORD92-201ENST00000585078 85 ntBASIC1.88□□□□□ -2.11
PTPRAP18433 BX248123.2-201ENST00000606318 124 ntBASIC1.88□□□□□ -2.11
PTPRAP18433 MIR6082-201ENST00000613604 109 ntBASIC1.88□□□□□ -2.11
PTPRAP18433 MIR7111-201ENST00000619751 72 ntBASIC1.88□□□□□ -2.11
PTPRAP18433 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
PTPRAP18433 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.88□□□□□ -2.11
PTPRAP18433 SNORD113.3-201ENST00000364630 78 ntBASIC1.87□□□□□ -2.11
PTPRAP18433 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
PTPRAP18433 RNU6-934P-201ENST00000365154 107 ntBASIC1.87□□□□□ -2.11
PTPRAP18433 RPS27P16-201ENST00000425758 201 ntBASIC1.87□□□□□ -2.11
PTPRAP18433 AC073261.1-201ENST00000429409 121 ntBASIC1.87□□□□□ -2.11
PTPRAP18433 RNU6-557P-201ENST00000516842 110 ntBASIC1.87□□□□□ -2.11
PTPRAP18433 AC036111.3-201ENST00000526389 112 ntBASIC1.87□□□□□ -2.11
PTPRAP18433 MIR548H5-201ENST00000580314 60 ntBASIC1.87□□□□□ -2.11
PTPRAP18433 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PTPRAP18433 RNU6-1094P-201ENST00000362416 104 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 RNU6-161P-201ENST00000363051 106 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 Y_RNA.491-201ENST00000384417 107 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 Y_RNA.565-201ENST00000384719 101 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 MIR548U-201ENST00000390728 81 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 RNU6-1054P-201ENST00000411293 104 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 RNU6-1108P-201ENST00000516308 104 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 RN7SKP88-201ENST00000516847 250 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 MIR4771-2-201ENST00000577758 74 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 MIR4771-1-201ENST00000582617 74 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 7SK.8-201ENST00000612110 250 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 7SK.11-201ENST00000615477 250 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 7SK.13-201ENST00000622040 250 ntBASIC1.86□□□□□ -2.11
PTPRAP18433 MIRLET7A1-201ENST00000362295 80 ntBASIC1.85□□□□□ -2.11
PTPRAP18433 SNORA25.9-201ENST00000365087 128 ntBASIC1.85□□□□□ -2.11
PTPRAP18433 SNORA31.2-201ENST00000516019 134 ntBASIC1.85□□□□□ -2.11
PTPRAP18433 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.85□□□□□ -2.11
PTPRAP18433 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.85□□□□□ -2.11
PTPRAP18433 RNU6-686P-201ENST00000364839 107 ntBASIC1.84□□□□□ -2.11
PTPRAP18433 Y_RNA.327-201ENST00000365201 102 ntBASIC1.84□□□□□ -2.11
PTPRAP18433 Y_RNA.363-201ENST00000365529 113 ntBASIC1.84□□□□□ -2.11
PTPRAP18433 SNORA67.6-201ENST00000391093 99 ntBASIC1.84□□□□□ -2.11
PTPRAP18433 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PTPRAP18433 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.84□□□□□ -2.11
PTPRAP18433 AC092628.1-201ENST00000436250 252 ntBASIC1.84□□□□□ -2.11
PTPRAP18433 AC008834.1-201ENST00000511612 175 ntBASIC1.84□□□□□ -2.11
PTPRAP18433 AC023827.1-201ENST00000569247 97 ntBASIC1.84□□□□□ -2.11
PTPRAP18433 RNU7-10P-201ENST00000607194 63 ntBASIC1.84□□□□□ -2.11
PTPRAP18433 U7.4-201ENST00000614961 63 ntBASIC1.84□□□□□ -2.11
PTPRAP18433 Y_RNA.788-201ENST00000622394 112 ntBASIC1.84□□□□□ -2.11
PTPRAP18433 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.83□□□□□ -2.12
PTPRAP18433 Y_RNA.56-201ENST00000362798 112 ntBASIC1.83□□□□□ -2.12
PTPRAP18433 MIR125B2-201ENST00000385128 89 ntBASIC1.83□□□□□ -2.12
PTPRAP18433 MIR519A1-201ENST00000385257 85 ntBASIC1.83□□□□□ -2.12
PTPRAP18433 AL606490.4-201ENST00000423117 127 ntBASIC1.83□□□□□ -2.12
PTPRAP18433 FGF7P7-201ENST00000514120 227 ntBASIC1.83□□□□□ -2.12
PTPRAP18433 Y_RNA.809-201ENST00000516058 95 ntBASIC1.83□□□□□ -2.12
PTPRAP18433 MIR4422-201ENST00000581938 83 ntBASIC1.83□□□□□ -2.12
PTPRAP18433 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.83□□□□□ -2.12
PTPRAP18433 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
PTPRAP18433 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PTPRAP18433 Y_RNA.42-201ENST00000362660 108 ntBASIC1.82□□□□□ -2.12
PTPRAP18433 RNU6-392P-201ENST00000364926 101 ntBASIC1.82□□□□□ -2.12
PTPRAP18433 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PTPRAP18433 MIR518E-201ENST00000385252 88 ntBASIC1.82□□□□□ -2.12
PTPRAP18433 SNORD90-201ENST00000391145 111 ntBASIC1.82□□□□□ -2.12
PTPRAP18433 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
PTPRAP18433 MIR1323-201ENST00000408090 73 ntBASIC1.82□□□□□ -2.12
PTPRAP18433 RNU7-40P-201ENST00000516397 64 ntBASIC1.82□□□□□ -2.12
PTPRAP18433 Y_RNA.697-201ENST00000516776 113 ntBASIC1.82□□□□□ -2.12
PTPRAP18433 RNU6-765P-201ENST00000516916 99 ntBASIC1.82□□□□□ -2.12
PTPRAP18433 MIR517C-201ENST00000385103 95 ntBASIC1.81□□□□□ -2.12
PTPRAP18433 MIR934-201ENST00000401241 83 ntBASIC1.81□□□□□ -2.12
PTPRAP18433 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.81□□□□□ -2.12
PTPRAP18433 RNU7-156P-201ENST00000517214 74 ntBASIC1.81□□□□□ -2.12
PTPRAP18433 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.81□□□□□ -2.12
PTPRAP18433 TRDV1-202ENST00000621643 102 ntBASIC1.81□□□□□ -2.12
PTPRAP18433 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PTPRAP18433 RNU6-1260P-201ENST00000362944 107 ntBASIC1.8□□□□□ -2.12
PTPRAP18433 SNORA7.1-201ENST00000363750 139 ntBASIC1.8□□□□□ -2.12
PTPRAP18433 Y_RNA.660-201ENST00000516002 120 ntBASIC1.8□□□□□ -2.12
PTPRAP18433 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.8□□□□□ -2.12
PTPRAP18433 AC106800.4-201ENST00000614905 153 ntBASIC1.8□□□□□ -2.12
PTPRAP18433 Y_RNA.355-201ENST00000365462 98 ntBASIC1.79□□□□□ -2.12
PTPRAP18433 SNORD111-201ENST00000408139 94 ntBASIC1.79□□□□□ -2.12
PTPRAP18433 RPS26P5-201ENST00000418544 335 ntBASIC1.79□□□□□ -2.12
PTPRAP18433 SCARNA18B-201ENST00000458806 135 ntBASIC1.79□□□□□ -2.12
PTPRAP18433 RNU6-448P-201ENST00000517052 107 ntBASIC1.79□□□□□ -2.12
PTPRAP18433 SNORA31.24-201ENST00000517232 57 ntBASIC1.79□□□□□ -2.12
PTPRAP18433 MIR4421-201ENST00000578133 69 ntBASIC1.79□□□□□ -2.12
PTPRAP18433 ZNF209P-201ENST00000593450 2304 ntBASIC1.79□□□□□ -2.12
PTPRAP18433 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PTPRAP18433 SNORD77.2-201ENST00000391045 68 ntBASIC1.78□□□□□ -2.12
PTPRAP18433 RNU6-380P-201ENST00000410207 107 ntBASIC1.78□□□□□ -2.12
PTPRAP18433 AC139453.2-201ENST00000487255 133 ntBASIC1.78□□□□□ -2.12
PTPRAP18433 MIR4676-201ENST00000583078 72 ntBASIC1.78□□□□□ -2.12
PTPRAP18433 Y_RNA.532-201ENST00000384590 113 ntBASIC1.77□□□□□ -2.13
PTPRAP18433 Y_RNA.545-201ENST00000384652 105 ntBASIC1.77□□□□□ -2.13
PTPRAP18433 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms